| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
Click here to switch to the map view.
The map label for this gene is astA [H]
Identifier: 209696140
GI number: 209696140
Start: 2959736
End: 2960755
Strand: Direct
Name: astA [H]
Synonym: VSAL_I2734
Alternate gene names: 209696140
Gene position: 2959736-2960755 (Clockwise)
Preceding gene: 209696139
Following gene: 209696141
Centisome position: 89.01
GC content: 41.08
Gene sequence:
>1020_bases TTGATGCTTGTTATTCGCCCTATTACTCAGGCAGATTATCCTGCACTTCATCAGTGTGCCGTAGAATCTGGACATGGTTT TACGTCATTACCCGTTAATGAAGAGCAGCTTAGAAATCGTATTGATCATTCCACAGAAAGTTTTGAAAAAGAAGCGCTTT CCCCTGGGACTGAAGGCTACCTTATGGTTGGCGAAGACACGGTTACCGGTGAAGTGACCGGAACCACAGGGATAGAAGCG GCAGTCGGACTCGATTCACCATTTTATAATTATCACATCAGTAAAGTGGTTCATTTCTCTCGTAAATTAAACGTAAACAA TGTGGTAAAAGTGCTGACGTTCGGCAGTAATTACACGGGAAGCACTGAGATTTGTACTCTATTTCTACGTCCGGAATTTC GTGAAGGCCTCAATGGTCGCTTGATGTCAAAAGCCCGATTTTTAATGATGGCAGAACACCCGCACCGTTTCTCAGACACT ATTTTTGCAGAGATGCGTGGTGTGTCAGATGAAGAGGGGCAATCACCATTCTGGAAATGGTTACAAAAGCATTTCTTTTC TATCGATTTTACAGAAGCCGATTATTTAACTGGAATTGGCTATAAAGGGTTTATTGCGGATTTAATGCCTAAATTACCTA TCTATGTCAGCTTATTAAGTAAGGAAGCTCAAGAGGTTATTGGCAAGGTGCATGACAGTACTAAACCAGCTTTAAAACTG TTAGAGAATGAAGGGTTTCGTTGTCGTGGTTATGTGGATATTTTTGACGCGGGCCCAACAGTAGAGTGCGATTTACGCAG CATTGAATCGGTGCGAAATTCATTTAAAGCCAAAGTTATCATTACAGAACATAACAGCTCTCAACAGTATTTAATTTCAA ATACATCGTTTGAAAACTTTAGAGCAACGGCAACAACAGCTGCTTATGACAAAGCCACTGATACCGTTCATTTAACTAGA GATGCGGCAGATGCATTACAAGTTGATGTTGATGATTACGTACGTTTACTGGCTCAATAG
Upstream 100 bases:
>100_bases TACTTTTATTTCTACAGTATAGTGCTCACTCCAATGAATAGTCTCGTGGTTTTATTTATTGGAATTAGCATGATCTTTAT ACATCGCATCGGAGGGATTA
Downstream 100 bases:
>100_bases AGGACAAAGGATATGACACATTGGATTGCAGGGGATTGGGTTTCTGGCCACGGTGAAACAATACAATCATTAAGCCCATA CAACAGCAACGTTGTATGGC
Product: arginine N-succinyltransferase
Products: NA
Alternate protein names: AST; AOST [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MMLVIRPITQADYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSTESFEKEALSPGTEGYLMVGEDTVTGEVTGTTGIEA AVGLDSPFYNYHISKVVHFSRKLNVNNVVKVLTFGSNYTGSTEICTLFLRPEFREGLNGRLMSKARFLMMAEHPHRFSDT IFAEMRGVSDEEGQSPFWKWLQKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQEVIGKVHDSTKPALKL LENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHNSSQQYLISNTSFENFRATATTAAYDKATDTVHLTR DAADALQVDVDDYVRLLAQ
Sequences:
>Translated_339_residues MMLVIRPITQADYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSTESFEKEALSPGTEGYLMVGEDTVTGEVTGTTGIEA AVGLDSPFYNYHISKVVHFSRKLNVNNVVKVLTFGSNYTGSTEICTLFLRPEFREGLNGRLMSKARFLMMAEHPHRFSDT IFAEMRGVSDEEGQSPFWKWLQKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQEVIGKVHDSTKPALKL LENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHNSSQQYLISNTSFENFRATATTAAYDKATDTVHLTR DAADALQVDVDDYVRLLAQ >Mature_339_residues MMLVIRPITQADYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSTESFEKEALSPGTEGYLMVGEDTVTGEVTGTTGIEA AVGLDSPFYNYHISKVVHFSRKLNVNNVVKVLTFGSNYTGSTEICTLFLRPEFREGLNGRLMSKARFLMMAEHPHRFSDT IFAEMRGVSDEEGQSPFWKWLQKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQEVIGKVHDSTKPALKL LENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHNSSQQYLISNTSFENFRATATTAAYDKATDTVHLTR DAADALQVDVDDYVRLLAQ
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine N-succinyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=340, Percent_Identity=47.0588235294118, Blast_Score=315, Evalue=3e-87,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007041 - InterPro: IPR017650 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 38008; Mature: 38008
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLVIRPITQADYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSTESFEKEALSPGTEGY CEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCCCE LMVGEDTVTGEVTGTTGIEAAVGLDSPFYNYHISKVVHFSRKLNVNNVVKVLTFGSNYTG EEECCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC STEICTLFLRPEFREGLNGRLMSKARFLMMAEHPHRFSDTIFAEMRGVSDEEGQSPFWKW CCEEEEEEECCHHHCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHH LQKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQEVIGKVHDSTKPALKL HHHHHCEEECCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH LENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHNSSQQYLISNTSFENF HHCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCCCCCE RATATTAAYDKATDTVHLTRDAADALQVDVDDYVRLLAQ EEEEEHHHHCCCCCEEEEECCCHHHHEECHHHHHHHHCC >Mature Secondary Structure MMLVIRPITQADYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSTESFEKEALSPGTEGY CEEEEECCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHCCCHHHHHHHHCCCCCCCE LMVGEDTVTGEVTGTTGIEAAVGLDSPFYNYHISKVVHFSRKLNVNNVVKVLTFGSNYTG EEECCCEEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCC STEICTLFLRPEFREGLNGRLMSKARFLMMAEHPHRFSDTIFAEMRGVSDEEGQSPFWKW CCEEEEEEECCHHHCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHH LQKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQEVIGKVHDSTKPALKL HHHHHCEEECCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH LENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHNSSQQYLISNTSFENF HHCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHCCEEEEEEEECCCCCEEEEECCCCCCE RATATTAAYDKATDTVHLTRDAADALQVDVDDYVRLLAQ EEEEEHHHHCCCCCEEEEECCCHHHHEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA