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The map label for this gene is yhcB [H]

Identifier: 209696074

GI number: 209696074

Start: 2883425

End: 2883880

Strand: Direct

Name: yhcB [H]

Synonym: VSAL_I2666

Alternate gene names: 209696074

Gene position: 2883425-2883880 (Clockwise)

Preceding gene: 209696065

Following gene: 209696075

Centisome position: 86.72

GC content: 34.87

Gene sequence:

>456_bases
ATGGCTTGGACATACGCATTAATTGGTTTAGCTATTGGTATAAGTATTGGCTTTATCATTTCTCGATTTACTATACCGGG
TATTAAACAGCAAAAATCATTAAAACAAGATTTAGAAAAATCAAAATATGAATTAGAGCAATACCGACAAGAGCTGGTTG
ATCACTTTGCAACTAGCGCGACAATGCTTGAAGCGTTAGCAAAAGATTTTAATAAAATGTATGACCACATGGCGTCAACA
TCTAAAGAGCTAATGCCAAATCTTCCAGAGCAAGATAACCCATTTACCGCTCGTTTAGATGAAATGACACTTTCTCCTGA
ATTAAATAAGAAAGTGGCTCATATAAAAGAAGAAGTAAGCAAACAACCCAAAGATTATGCAAATGGCGCAACCGGTCTAC
TTAAAGATGAACCATTAATGGATATCAGCGCAAAGAAAGAAGATAAAATTGCATAA

Upstream 100 bases:

>100_bases
ATTCACTCTGTTCATAGTAGCATGATCGCAATAAACACTATGAGTGGGCTTACTCACATTTATGCCTACTCATGCATAAT
AAAATGACAAGGAGCACTTC

Downstream 100 bases:

>100_bases
TAAATAAACACCACAATGAACTTTTTTAAAGGTTTCTAAGTCTCACATATACATCTTTATTATAAATGGAGTATATGTAG
ATGAAGAAACCTTTATTAAT

Product: cytochrome D ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome bd-I oxidase subunit III [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MAWTYALIGLAIGISIGFIISRFTIPGIKQQKSLKQDLEKSKYELEQYRQELVDHFATSATMLEALAKDFNKMYDHMAST
SKELMPNLPEQDNPFTARLDEMTLSPELNKKVAHIKEEVSKQPKDYANGATGLLKDEPLMDISAKKEDKIA

Sequences:

>Translated_151_residues
MAWTYALIGLAIGISIGFIISRFTIPGIKQQKSLKQDLEKSKYELEQYRQELVDHFATSATMLEALAKDFNKMYDHMAST
SKELMPNLPEQDNPFTARLDEMTLSPELNKKVAHIKEEVSKQPKDYANGATGLLKDEPLMDISAKKEDKIA
>Mature_150_residues
AWTYALIGLAIGISIGFIISRFTIPGIKQQKSLKQDLEKSKYELEQYRQELVDHFATSATMLEALAKDFNKMYDHMASTS
KELMPNLPEQDNPFTARLDEMTLSPELNKKVAHIKEEVSKQPKDYANGATGLLKDEPLMDISAKKEDKIA

Specific function: Unknown

COG id: COG3105

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1628 [H]

Homologues:

Organism=Escherichia coli, GI87082232, Length=135, Percent_Identity=43.7037037037037, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009386 [H]

Pfam domain/function: PF06295 DUF1043 [H]

EC number: NA

Molecular weight: Translated: 17080; Mature: 16949

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWTYALIGLAIGISIGFIISRFTIPGIKQQKSLKQDLEKSKYELEQYRQELVDHFATSA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLEALAKDFNKMYDHMASTSKELMPNLPEQDNPFTARLDEMTLSPELNKKVAHIKEEVS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
KQPKDYANGATGLLKDEPLMDISAKKEDKIA
HCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AWTYALIGLAIGISIGFIISRFTIPGIKQQKSLKQDLEKSKYELEQYRQELVDHFATSA
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLEALAKDFNKMYDHMASTSKELMPNLPEQDNPFTARLDEMTLSPELNKKVAHIKEEVS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHH
KQPKDYANGATGLLKDEPLMDISAKKEDKIA
HCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]