| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is hpt [H]
Identifier: 209696030
GI number: 209696030
Start: 2832308
End: 2832838
Strand: Reverse
Name: hpt [H]
Synonym: VSAL_I2618
Alternate gene names: 209696030
Gene position: 2832838-2832308 (Counterclockwise)
Preceding gene: 209696032
Following gene: 209696029
Centisome position: 85.19
GC content: 36.35
Gene sequence:
>531_bases ATGAAGCATACAGTAGAAGTTATGATCTCTGAGCAAGAGGTTAATAAGCGCGTATTAGAGCTAGGAAAGCAAATTTCAGA ACACTATAAAGAGTCTGAAGGGCTTGTTATGGTTGGTTTGTTACGTGGTTCATTTGTTTTTATGGCAGATTTAGCTCGTG CGATTGATACTCCAATGACTGTCGATTTTATGACAGCATCAAGCTATGGCAATAGCATGGAAAGCACACGAGATGTACGA ATCCTTAAAGATCTTGATGATGATATTAAAGGAAAAGACGTATTATTAGTGGAAGATATTATTGATACTGGTAACACATT GAGTAAAGTATGTGACATTCTTTCTATTCGTGAGCCTAACTCAATCGCAATTTGTACGTTACTTGATAAACCTTCTCGTC GTGAAGTTGAAGTTAAAGTAGATTGGCTTGGTTTCTCTATTCCTGATGAATTTGTTGTGGGTGTGGGTATTGATTACGCT CAAAAGTACCGTAATTTACCTTATATTGGTAAAGTTGTTCCTCAAGAATAA
Upstream 100 bases:
>100_bases AAAACTTTTTATAATTGGCGGTATGTCGATTCTTATTTTGTTGTAAACTGTGTCTGTCTAAGTCCTGCCGTTGGTGGGTT TAATGAATAAGTGAGATGGT
Downstream 100 bases:
>100_bases CGTGAGTCAAAAATAATAATTAAATAAAAAAGCCAAAGAAAATACCCTTTCTTTGGCTTTTTTATTGATACTTCTATTAT CTGTGGTGTGTAGATAAAAA
Product: hypoxanthine phosphoribosyltransferase
Products: NA
Alternate protein names: HPRT [H]
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKHTVEVMISEQEVNKRVLELGKQISEHYKESEGLVMVGLLRGSFVFMADLARAIDTPMTVDFMTASSYGNSMESTRDVR ILKDLDDDIKGKDVLLVEDIIDTGNTLSKVCDILSIREPNSIAICTLLDKPSRREVEVKVDWLGFSIPDEFVVGVGIDYA QKYRNLPYIGKVVPQE
Sequences:
>Translated_176_residues MKHTVEVMISEQEVNKRVLELGKQISEHYKESEGLVMVGLLRGSFVFMADLARAIDTPMTVDFMTASSYGNSMESTRDVR ILKDLDDDIKGKDVLLVEDIIDTGNTLSKVCDILSIREPNSIAICTLLDKPSRREVEVKVDWLGFSIPDEFVVGVGIDYA QKYRNLPYIGKVVPQE >Mature_176_residues MKHTVEVMISEQEVNKRVLELGKQISEHYKESEGLVMVGLLRGSFVFMADLARAIDTPMTVDFMTASSYGNSMESTRDVR ILKDLDDDIKGKDVLLVEDIIDTGNTLSKVCDILSIREPNSIAICTLLDKPSRREVEVKVDWLGFSIPDEFVVGVGIDYA QKYRNLPYIGKVVPQE
Specific function: This enzyme acts exclusively on hypoxanthine; it does not act on guanine [H]
COG id: COG0634
COG function: function code F; Hypoxanthine-guanine phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4504483, Length=157, Percent_Identity=36.3057324840764, Blast_Score=97, Evalue=9e-21, Organism=Homo sapiens, GI9910262, Length=173, Percent_Identity=31.7919075144509, Blast_Score=81, Evalue=5e-16, Organism=Escherichia coli, GI87081689, Length=174, Percent_Identity=72.4137931034483, Blast_Score=261, Evalue=2e-71, Organism=Caenorhabditis elegans, GI17510817, Length=177, Percent_Identity=37.8531073446328, Blast_Score=97, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005904 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.8 [H]
Molecular weight: Translated: 19786; Mature: 19786
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHTVEVMISEQEVNKRVLELGKQISEHYKESEGLVMVGLLRGSFVFMADLARAIDTPMT CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHHHCCCCE VDFMTASSYGNSMESTRDVRILKDLDDDIKGKDVLLVEDIIDTGNTLSKVCDILSIREPN EEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHCCCCC SIAICTLLDKPSRREVEVKVDWLGFSIPDEFVVGVGIDYAQKYRNLPYIGKVVPQE CEEEEEEECCCCCCEEEEEEEEEECCCCCHHEEECCCHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKHTVEVMISEQEVNKRVLELGKQISEHYKESEGLVMVGLLRGSFVFMADLARAIDTPMT CCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHHHCCCCE VDFMTASSYGNSMESTRDVRILKDLDDDIKGKDVLLVEDIIDTGNTLSKVCDILSIREPN EEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHHHCCCHHHHHHHHHHHCCCCC SIAICTLLDKPSRREVEVKVDWLGFSIPDEFVVGVGIDYAQKYRNLPYIGKVVPQE CEEEEEEECCCCCCEEEEEEEEEECCCCCHHEEECCCHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2388850 [H]