Click here to switch to the map view.

The map label for this gene is ynjF [H]

Identifier: 209695923

GI number: 209695923

Start: 2685455

End: 2686081

Strand: Direct

Name: ynjF [H]

Synonym: VSAL_I2505

Alternate gene names: 209695923

Gene position: 2685455-2686081 (Clockwise)

Preceding gene: 209695922

Following gene: 209695938

Centisome position: 80.76

GC content: 35.89

Gene sequence:

>627_bases
ATGCTTGATAAGTTCAGCATCCAACTTATACGTAAACCCTTATCAATAACGGCAAGTCAATTAAATAAACTTGGTATAAC
CGCAAATCAAACGACGGTTTTTGGCTTCGTTTTAGGCTGCATGGCTTTTCCGGCGTTAATCTTTCAAGAATACAATATTG
CTTTGGTTTTCATTTTACTAAATCGTATTTGTGATGGTTTGGATGGGGCATTAGCAAGAATCAACGGCATTACAGATTCG
GGAGGATTTTTAGATATTAGTTTAGATTTTCTCTTTTATTCTTTAATTCCTTTTGGATTTGTTCTCGCAAATCCAGAACA
TAACGCCATTGCAGGCGCATTAATTATCTTTTCATTTATCGGTACTGGCAGCAGTTTTTTGGCTTTTGCGGTGATGGCAG
GAAAAAGAAATATAGATAACCCAGTCTACAAAAACAAATCATTGTATTACATGAGAGGGCTAACCGAAGGAACAGAAACG
ATTGGCTGTTTTGTTTTATTTTGCTTATTCCCTTTTCACTTTTCAATCATTGCTTATGTGTTTTCCGCTCTATGTTGGAT
CACGACAATAAACAGAATTTGGTCTGGGTTTCATACACTAAAAGACAGTGAAAAAAGCGATCAATGA

Upstream 100 bases:

>100_bases
CAACTCGCTGAAGCCAATATACCTACACTATTAGTCACTCATGATAATGATGACATTCCGAACAATAGCCAACAACTCTC
TTGGCCAATGGAGATTCCCC

Downstream 100 bases:

>100_bases
TAAATCAATCCTCTTGCTCATAAACTAAAAAAGCCACCGCAAGTAACCTTGCTGTGGCTTTTATGATTCTACTTATTGTT
AAATAAAAATGAGTTTAAAA

Product: phosphatidyltransferase

Products: CMP; 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MLDKFSIQLIRKPLSITASQLNKLGITANQTTVFGFVLGCMAFPALIFQEYNIALVFILLNRICDGLDGALARINGITDS
GGFLDISLDFLFYSLIPFGFVLANPEHNAIAGALIIFSFIGTGSSFLAFAVMAGKRNIDNPVYKNKSLYYMRGLTEGTET
IGCFVLFCLFPFHFSIIAYVFSALCWITTINRIWSGFHTLKDSEKSDQ

Sequences:

>Translated_208_residues
MLDKFSIQLIRKPLSITASQLNKLGITANQTTVFGFVLGCMAFPALIFQEYNIALVFILLNRICDGLDGALARINGITDS
GGFLDISLDFLFYSLIPFGFVLANPEHNAIAGALIIFSFIGTGSSFLAFAVMAGKRNIDNPVYKNKSLYYMRGLTEGTET
IGCFVLFCLFPFHFSIIAYVFSALCWITTINRIWSGFHTLKDSEKSDQ
>Mature_208_residues
MLDKFSIQLIRKPLSITASQLNKLGITANQTTVFGFVLGCMAFPALIFQEYNIALVFILLNRICDGLDGALARINGITDS
GGFLDISLDFLFYSLIPFGFVLANPEHNAIAGALIIFSFIGTGSSFLAFAVMAGKRNIDNPVYKNKSLYYMRGLTEGTET
IGCFVLFCLFPFHFSIIAYVFSALCWITTINRIWSGFHTLKDSEKSDQ

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=206, Percent_Identity=57.7669902912621, Blast_Score=219, Evalue=7e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: 2.7.8.5

Molecular weight: Translated: 23033; Mature: 23033

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDKFSIQLIRKPLSITASQLNKLGITANQTTVFGFVLGCMAFPALIFQEYNIALVFILL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NRICDGLDGALARINGITDSGGFLDISLDFLFYSLIPFGFVLANPEHNAIAGALIIFSFI
HHHHCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
GTGSSFLAFAVMAGKRNIDNPVYKNKSLYYMRGLTEGTETIGCFVLFCLFPFHFSIIAYV
CCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FSALCWITTINRIWSGFHTLKDSEKSDQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLDKFSIQLIRKPLSITASQLNKLGITANQTTVFGFVLGCMAFPALIFQEYNIALVFILL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NRICDGLDGALARINGITDSGGFLDISLDFLFYSLIPFGFVLANPEHNAIAGALIIFSFI
HHHHCCHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
GTGSSFLAFAVMAGKRNIDNPVYKNKSLYYMRGLTEGTETIGCFVLFCLFPFHFSIIAYV
CCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
FSALCWITTINRIWSGFHTLKDSEKSDQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CDPdiacylglycerol; sn-glycerol 3-phosphate

Specific reaction: CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]