Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is bcp [H]

Identifier: 209695806

GI number: 209695806

Start: 2551200

End: 2551670

Strand: Direct

Name: bcp [H]

Synonym: VSAL_I2381

Alternate gene names: 209695806

Gene position: 2551200-2551670 (Clockwise)

Preceding gene: 209695805

Following gene: 209695809

Centisome position: 76.72

GC content: 39.28

Gene sequence:

>471_bases
ATGATCACACCATTAGCGGCAGGCTCTCCTGCACCAGATATCTCTCTTTTGGATCAAAATGGAGAGACTATTTCTCTTTC
CGATCTAAAAGGAAAAAAGGTTTTATTCTATTTCTATCCAAAAGCAATGACACCAGGATGTACTGTTCAAGCTCAAGGCC
TTAGAGATGTAAAAGCAGAATTAGATGCGCATAATGTTGTCGTGTTAGGCGTGAGCATTGATGCGGTGAAACGCTTAGGT
AAATTCATTGAGCGTGACCAATTAAACTTTACGTTACTGTCTGATGAAGATCACTCGGCTGCGGATGCTTTTGGTGTTTG
GGGTGAGAAAAAATTCATGGGCAAAGTGTATGACGGTCTGCACCGCATTAGTTTCTTAATTAATGAAGACGGCATTATTG
AACACGTCTTCACTAAATTTAAAACCAAAACACACCATGAAGTCGTTCTGGATTATTTAAACGAAAAATAA

Upstream 100 bases:

>100_bases
AATCCAAGAAGAATTTGAACATTTATGCTCAACATTAAATGTCAGCGGAAAAATCAATTTTTATAAAAACTAAATATACC
GTCAACGTTAAGGAAATATT

Downstream 100 bases:

>100_bases
TCATTTTTAAAGACGAAAAATAAAAAAGGCGGTGCTCATCTAAAGCACCGCCTTTCTTTTATCTAATAATGATTGTTACG
CTTTTTTAAAGACTTCATCG

Product: thioredoxin-dependent thiol peroxidase

Products: NA

Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MITPLAAGSPAPDISLLDQNGETISLSDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVKAELDAHNVVVLGVSIDAVKRLG
KFIERDQLNFTLLSDEDHSAADAFGVWGEKKFMGKVYDGLHRISFLINEDGIIEHVFTKFKTKTHHEVVLDYLNEK

Sequences:

>Translated_156_residues
MITPLAAGSPAPDISLLDQNGETISLSDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVKAELDAHNVVVLGVSIDAVKRLG
KFIERDQLNFTLLSDEDHSAADAFGVWGEKKFMGKVYDGLHRISFLINEDGIIEHVFTKFKTKTHHEVVLDYLNEK
>Mature_156_residues
MITPLAAGSPAPDISLLDQNGETISLSDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVKAELDAHNVVVLGVSIDAVKRLG
KFIERDQLNFTLLSDEDHSAADAFGVWGEKKFMGKVYDGLHRISFLINEDGIIEHVFTKFKTKTHHEVVLDYLNEK

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788825, Length=154, Percent_Identity=62.3376623376623, Blast_Score=204, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6322180, Length=112, Percent_Identity=39.2857142857143, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17350; Mature: 17350

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPLAAGSPAPDISLLDQNGETISLSDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVKAE
CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCEEEECCCHHHHHH
LDAHNVVVLGVSIDAVKRLGKFIERDQLNFTLLSDEDHSAADAFGVWGEKKFMGKVYDGL
CCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHH
HRISFLINEDGIIEHVFTKFKTKTHHEVVLDYLNEK
HHHHEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MITPLAAGSPAPDISLLDQNGETISLSDLKGKKVLFYFYPKAMTPGCTVQAQGLRDVKAE
CCCCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCEEEECCCHHHHHH
LDAHNVVVLGVSIDAVKRLGKFIERDQLNFTLLSDEDHSAADAFGVWGEKKFMGKVYDGL
CCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHH
HRISFLINEDGIIEHVFTKFKTKTHHEVVLDYLNEK
HHHHEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]