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The map label for this gene is narP [H]

Identifier: 209695795

GI number: 209695795

Start: 2543982

End: 2544593

Strand: Direct

Name: narP [H]

Synonym: VSAL_I2370

Alternate gene names: 209695795

Gene position: 2543982-2544593 (Clockwise)

Preceding gene: 209695794

Following gene: 209695796

Centisome position: 76.51

GC content: 38.4

Gene sequence:

>612_bases
ATGTGGAATGTTGTTATCGTTGACGATCATCCTTTAATGCGCCGAGGCATTGGCCAACTTCTTTCTTTTGAAGATGAATT
TACCCTAGCAGGAGAAGCAAGTAATGGCACAGATGCCGTTGCTCTAATCTCTAAAGATGAACCCGACCTTGTTCTTCTCG
ATCTCAATATGAAAGGCATGTCAGGCCTTGATACGTTGCATGCATTACGCAATGAAGGCGTAACTTGCCCGATTGTTATT
CTTACCGTATCCGATAATAAACAAGACATTAAAACCTTAATAAAAGCAGGTGCTGACGGTTACTTACTTAAAGACAGTGA
ACCTGACGAACTTATTGCACTGCTAAAGCAAGCAATACAAGGTGATAAAGCCTATTCAGAGCAAGTAAAAATTTGTTTAG
AAGAAGGCAAGAATGGTGATGATAAACTGTCTAGTTTAACCGCTCGTGAACTTGAAATATTACAAAATGTAGCGAAAGGA
ATGAGAAATAAACAAGTAGCAGACAAACTGTTCATTTCAGAAGCAACAGTAAAAGTGCACATGAAGAGCCTACTTAAAAA
ACTCAATGTAAAATCGAGAGTAGCAGCAACCTTACTTTATTTGGATGCATAA

Upstream 100 bases:

>100_bases
TTCGAGGTACTTTATCCATTGCATCAGAATTAGAACACGGTTGTGCAGTGAACGTTACGTTTCCACTTAACCAATAATTA
ATTTAAAAGGTATATACCCT

Downstream 100 bases:

>100_bases
AATGAAAACAGCCTTATGTTCTTTAATATTGCTATCACTACTCTCAGGTTGTGCATCAACAACCAAAGTAGAAAATACGA
ATATAGATAAGGTTTTTTTA

Product: nitrate/nitrite response regulator protein NarP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MWNVVIVDDHPLMRRGIGQLLSFEDEFTLAGEASNGTDAVALISKDEPDLVLLDLNMKGMSGLDTLHALRNEGVTCPIVI
LTVSDNKQDIKTLIKAGADGYLLKDSEPDELIALLKQAIQGDKAYSEQVKICLEEGKNGDDKLSSLTARELEILQNVAKG
MRNKQVADKLFISEATVKVHMKSLLKKLNVKSRVAATLLYLDA

Sequences:

>Translated_203_residues
MWNVVIVDDHPLMRRGIGQLLSFEDEFTLAGEASNGTDAVALISKDEPDLVLLDLNMKGMSGLDTLHALRNEGVTCPIVI
LTVSDNKQDIKTLIKAGADGYLLKDSEPDELIALLKQAIQGDKAYSEQVKICLEEGKNGDDKLSSLTARELEILQNVAKG
MRNKQVADKLFISEATVKVHMKSLLKKLNVKSRVAATLLYLDA
>Mature_203_residues
MWNVVIVDDHPLMRRGIGQLLSFEDEFTLAGEASNGTDAVALISKDEPDLVLLDLNMKGMSGLDTLHALRNEGVTCPIVI
LTVSDNKQDIKTLIKAGADGYLLKDSEPDELIALLKQAIQGDKAYSEQVKICLEEGKNGDDKLSSLTARELEILQNVAKG
MRNKQVADKLFISEATVKVHMKSLLKKLNVKSRVAATLLYLDA

Specific function: Could activate the expression of a formate dehydrogenase operon and could repress the transcription of the fumarate reductase (frdABCD) operon [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=203, Percent_Identity=53.6945812807882, Blast_Score=211, Evalue=2e-56,
Organism=Escherichia coli, GI1787473, Length=201, Percent_Identity=43.7810945273632, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI1788222, Length=205, Percent_Identity=30.2439024390244, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1790102, Length=194, Percent_Identity=31.9587628865979, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788712, Length=190, Percent_Identity=28.4210526315789, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1786747, Length=194, Percent_Identity=23.7113402061856, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1788546, Length=199, Percent_Identity=28.1407035175879, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788394, Length=209, Percent_Identity=26.7942583732057, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22233; Mature: 22233

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNVVIVDDHPLMRRGIGQLLSFEDEFTLAGEASNGTDAVALISKDEPDLVLLDLNMKGM
CEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCC
SGLDTLHALRNEGVTCPIVILTVSDNKQDIKTLIKAGADGYLLKDSEPDELIALLKQAIQ
CCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHC
GDKAYSEQVKICLEEGKNGDDKLSSLTARELEILQNVAKGMRNKQVADKLFISEATVKVH
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKSLLKKLNVKSRVAATLLYLDA
HHHHHHHHCHHHHHHHHEEEECC
>Mature Secondary Structure
MWNVVIVDDHPLMRRGIGQLLSFEDEFTLAGEASNGTDAVALISKDEPDLVLLDLNMKGM
CEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCC
SGLDTLHALRNEGVTCPIVILTVSDNKQDIKTLIKAGADGYLLKDSEPDELIALLKQAIQ
CCHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHC
GDKAYSEQVKICLEEGKNGDDKLSSLTARELEILQNVAKGMRNKQVADKLFISEATVKVH
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKSLLKKLNVKSRVAATLLYLDA
HHHHHHHHCHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]