Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is fliG [H]

Identifier: 209695739

GI number: 209695739

Start: 2479133

End: 2480185

Strand: Reverse

Name: fliG [H]

Synonym: VSAL_I2307

Alternate gene names: 209695739

Gene position: 2480185-2479133 (Counterclockwise)

Preceding gene: 209695740

Following gene: 209695738

Centisome position: 74.59

GC content: 43.4

Gene sequence:

>1053_bases
ATGGCTAATGACATTATTGAAGCAGACAAGAAAGAGGAAGACGCGACAGAGTTTGATCTTTCTTCATTATCGGGCTCAGA
GCGCGCAGCGATTCTATTACTTAGTTTAAGTGAAGATGACGCCGCAAGTATCATTCGTCATTTAGAACCCAAACAGGTTC
AGAAAGTCGGTGCAGCAATGGCAACAGTGTCTGATTTAAATCAGACTAAAGTGTCCGCGATTCATCGTGCTTTCTTAGAA
GATATTCAGAAGTACACAACGATCGGCATGGGCAGCGAAGACTTTATGCGTAATGCATTAGTTGCTGCACTTGGTGAAGA
CAAAGCCAATAACCTTGTTGACCAAATTTTATTGGGTAGCGGGTCTAAAGGGTTGGATTCATTGAAATGGATGGATCCTC
GTCAAGTGGCTAGCATCATTATGAATGAGCATCCACAGATCCAAACGATTGTACTGTCTTATTTAGATCCTGATCAGTCT
GCTGATATTTTATCCCAGTTCCCTGAACGTGTTCGTCTTGATTTAATGATGCGTATTGCACACCTTGAAGAAGTTCAACC
ATCAGCACTGGCTGAATTGAACGAAATCATGGAGAAACAATTCGCGGGTCAATCTGGCGCTCAAGCAGCCAAAATTGGCG
GCCTGAAAGCGGCGGCAGAAATCATGAACTACCTAGATAACAGTATTGAAGGTATGTTGATGGATCAAATTCGTGACCAA
GATGAAGAAACAGCAACGCAAATTCAAGATCTGATGTTTGTGTTTGAAAACCTGATAGATGTTCAAGATACGGGTATTCA
AATGTTGCTGCGTGATGTACCACAAGAAGTGCTACAAAAAGCGCTTAAAGGTGCAGATGACGGTCTTAAAGAGAAGATGT
TTAAGTGTATGTCGAAACGTGCGGCAGAACTTATGCGTGATGATCTTGAAGCCATGGGACCGGTACGTGTTGCTGATGTT
GAAGCTGCACAGAAAGAGATCTTGGCTGTGGCGAGAAGAATGGCGGACTCCGGTGACCTTATGTTAACCGGTGGTGCTGA
TGAATTCGTGTAA

Upstream 100 bases:

>100_bases
AATCTGCATAAAGATGAAGATTTATTGAAAGCGGTTCGTGCACTTGTTGCAAATGAACCAGAATTAGCAGCGCAAGTAGT
TAAAAATTGGGTATCTGAAA

Downstream 100 bases:

>100_bases
TACGATGTCGTCTTCAAAGCTATAATTAAACGGCTATTTCATTAGATTATGGAATGGCCGTTATACTTTTTGATATTCAA
AATAAGTATCTGAATTCTAA

Product: flagellar motor switch protein G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAMATVSDLNQTKVSAIHRAFLE
DIQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGSGSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQS
ADILSQFPERVRLDLMMRIAHLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQ
DEETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKRAAELMRDDLEAMGPVRVADV
EAAQKEILAVARRMADSGDLMLTGGADEFV

Sequences:

>Translated_350_residues
MANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAMATVSDLNQTKVSAIHRAFLE
DIQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGSGSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQS
ADILSQFPERVRLDLMMRIAHLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQ
DEETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKRAAELMRDDLEAMGPVRVADV
EAAQKEILAVARRMADSGDLMLTGGADEFV
>Mature_349_residues
ANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAMATVSDLNQTKVSAIHRAFLED
IQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGSGSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQSA
DILSQFPERVRLDLMMRIAHLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQD
EETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKRAAELMRDDLEAMGPVRVADVE
AAQKEILAVARRMADSGDLMLTGGADEFV

Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f

COG id: COG1536

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliG family [H]

Homologues:

Organism=Escherichia coli, GI1788249, Length=332, Percent_Identity=40.6626506024096, Blast_Score=264, Evalue=5e-72,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000090
- InterPro:   IPR023087
- InterPro:   IPR011002 [H]

Pfam domain/function: PF01706 FliG_C [H]

EC number: NA

Molecular weight: Translated: 38474; Mature: 38343

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAM
CCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHH
ATVSDLNQTKVSAIHRAFLEDIQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
GSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQSADILSQFPERVRLDLMMRIA
CCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
HLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQ
HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
AAELMRDDLEAMGPVRVADVEAAQKEILAVARRMADSGDLMLTGGADEFV
HHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
>Mature Secondary Structure 
ANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAM
CCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHH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HHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]