| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is fliG [H]
Identifier: 209695739
GI number: 209695739
Start: 2479133
End: 2480185
Strand: Reverse
Name: fliG [H]
Synonym: VSAL_I2307
Alternate gene names: 209695739
Gene position: 2480185-2479133 (Counterclockwise)
Preceding gene: 209695740
Following gene: 209695738
Centisome position: 74.59
GC content: 43.4
Gene sequence:
>1053_bases ATGGCTAATGACATTATTGAAGCAGACAAGAAAGAGGAAGACGCGACAGAGTTTGATCTTTCTTCATTATCGGGCTCAGA GCGCGCAGCGATTCTATTACTTAGTTTAAGTGAAGATGACGCCGCAAGTATCATTCGTCATTTAGAACCCAAACAGGTTC AGAAAGTCGGTGCAGCAATGGCAACAGTGTCTGATTTAAATCAGACTAAAGTGTCCGCGATTCATCGTGCTTTCTTAGAA GATATTCAGAAGTACACAACGATCGGCATGGGCAGCGAAGACTTTATGCGTAATGCATTAGTTGCTGCACTTGGTGAAGA CAAAGCCAATAACCTTGTTGACCAAATTTTATTGGGTAGCGGGTCTAAAGGGTTGGATTCATTGAAATGGATGGATCCTC GTCAAGTGGCTAGCATCATTATGAATGAGCATCCACAGATCCAAACGATTGTACTGTCTTATTTAGATCCTGATCAGTCT GCTGATATTTTATCCCAGTTCCCTGAACGTGTTCGTCTTGATTTAATGATGCGTATTGCACACCTTGAAGAAGTTCAACC ATCAGCACTGGCTGAATTGAACGAAATCATGGAGAAACAATTCGCGGGTCAATCTGGCGCTCAAGCAGCCAAAATTGGCG GCCTGAAAGCGGCGGCAGAAATCATGAACTACCTAGATAACAGTATTGAAGGTATGTTGATGGATCAAATTCGTGACCAA GATGAAGAAACAGCAACGCAAATTCAAGATCTGATGTTTGTGTTTGAAAACCTGATAGATGTTCAAGATACGGGTATTCA AATGTTGCTGCGTGATGTACCACAAGAAGTGCTACAAAAAGCGCTTAAAGGTGCAGATGACGGTCTTAAAGAGAAGATGT TTAAGTGTATGTCGAAACGTGCGGCAGAACTTATGCGTGATGATCTTGAAGCCATGGGACCGGTACGTGTTGCTGATGTT GAAGCTGCACAGAAAGAGATCTTGGCTGTGGCGAGAAGAATGGCGGACTCCGGTGACCTTATGTTAACCGGTGGTGCTGA TGAATTCGTGTAA
Upstream 100 bases:
>100_bases AATCTGCATAAAGATGAAGATTTATTGAAAGCGGTTCGTGCACTTGTTGCAAATGAACCAGAATTAGCAGCGCAAGTAGT TAAAAATTGGGTATCTGAAA
Downstream 100 bases:
>100_bases TACGATGTCGTCTTCAAAGCTATAATTAAACGGCTATTTCATTAGATTATGGAATGGCCGTTATACTTTTTGATATTCAA AATAAGTATCTGAATTCTAA
Product: flagellar motor switch protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAMATVSDLNQTKVSAIHRAFLE DIQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGSGSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQS ADILSQFPERVRLDLMMRIAHLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQ DEETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKRAAELMRDDLEAMGPVRVADV EAAQKEILAVARRMADSGDLMLTGGADEFV
Sequences:
>Translated_350_residues MANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAMATVSDLNQTKVSAIHRAFLE DIQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGSGSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQS ADILSQFPERVRLDLMMRIAHLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQ DEETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKRAAELMRDDLEAMGPVRVADV EAAQKEILAVARRMADSGDLMLTGGADEFV >Mature_349_residues ANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAMATVSDLNQTKVSAIHRAFLED IQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGSGSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQSA DILSQFPERVRLDLMMRIAHLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQD EETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKRAAELMRDDLEAMGPVRVADVE AAQKEILAVARRMADSGDLMLTGGADEFV
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=332, Percent_Identity=40.6626506024096, Blast_Score=264, Evalue=5e-72,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 38474; Mature: 38343
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAM CCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHH ATVSDLNQTKVSAIHRAFLEDIQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC GSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQSADILSQFPERVRLDLMMRIA CCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH HLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQ HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AAELMRDDLEAMGPVRVADVEAAQKEILAVARRMADSGDLMLTGGADEFV HHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure ANDIIEADKKEEDATEFDLSSLSGSERAAILLLSLSEDDAASIIRHLEPKQVQKVGAAM CCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHH ATVSDLNQTKVSAIHRAFLEDIQKYTTIGMGSEDFMRNALVAALGEDKANNLVDQILLGS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCC GSKGLDSLKWMDPRQVASIIMNEHPQIQTIVLSYLDPDQSADILSQFPERVRLDLMMRIA CCCCCCHHCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH HLEEVQPSALAELNEIMEKQFAGQSGAQAAKIGGLKAAAEIMNYLDNSIEGMLMDQIRDQ HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEETATQIQDLMFVFENLIDVQDTGIQMLLRDVPQEVLQKALKGADDGLKEKMFKCMSKR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH AAELMRDDLEAMGPVRVADVEAAQKEILAVARRMADSGDLMLTGGADEFV HHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]