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The map label for this gene is ccmC [H]

Identifier: 209695711

GI number: 209695711

Start: 2453502

End: 2454254

Strand: Reverse

Name: ccmC [H]

Synonym: VSAL_I2279

Alternate gene names: 209695711

Gene position: 2454254-2453502 (Counterclockwise)

Preceding gene: 209695712

Following gene: 209695710

Centisome position: 73.81

GC content: 41.57

Gene sequence:

>753_bases
ATGTGGAAATGGCTACATCCTTACGCTAAACCAGAAAAAGCGTATCAATTAAGTACTACACTGCTACCATGGTTTGCGGT
GATCTCTATCATCAGTTTGACCGTTGGGACCATCTGGGGCCTTGCTTTTGCACCTTCTGATTATCAACAAGGTGACAGTT
TTCGAATTATTTACATACACGTACCTGCTGCTATTTTGTCTATGGCCGCTTATATGTCGATGGCGATAGCTGCTTTTATT
GGTTTGGTTTGGCAATTAAAATTGTCTGATATGGCCGCGGCAGCAATGGCGCCTATTGGTGCGGTATTTACGTTCATCGC
TTTACTTACTGGTGCCGTTTGGGGCAAACCTATGTGGGGTGCTTGGTGGGTATGGGATGCCCGTTTAACGTCAGAATTAA
TTCTTCTATTTTTATACCTAGGGGTTATGGCCTTATATAACGCGTTTGATGATCAACGAACCGCTGCTCGTGCTGCGGGT
ATTCTTGCTATTGTTGGTGTGATTAATCTGCCAATCATTCACTTCTCTGTCGAATGGTGGAATACGCTTCATCAAGGTGC
AAGTATTACAAAGTTTGATAAACTTTCGATTTCTTCAGATATGTTGTGGCCTTTACTATTAAATATCATAGGCTTTGCAA
CTTTCTTCGGTTCTGTGACTCTTATTCGTTTTAGGAATGAAATTTTAGCAAAAGAGAGTCATCGTCCTTGGGTTAGAGCA
TTGGTAGAGACTAAATCTACCGTCTCTAAATAA

Upstream 100 bases:

>100_bases
ACATTGACTCCGTTTGCCATTAGTTCGGCACTACGAGTCAGTGTGCAATAAATCATAATTATAATTATAATTTTTATATT
TAAGTAAGTGAGATAAACCA

Downstream 100 bases:

>100_bases
TGTAAGAGAAGGGAATTACTGTTATGCATTTTGAAACATTAAGTGATTTTTTTGCCATGGGTGGTTACGCCGCTTATGTA
TGGGGTGCTTTTGGCGCTAC

Product: cytochrome C biogenesis protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MWKWLHPYAKPEKAYQLSTTLLPWFAVISIISLTVGTIWGLAFAPSDYQQGDSFRIIYIHVPAAILSMAAYMSMAIAAFI
GLVWQLKLSDMAAAAMAPIGAVFTFIALLTGAVWGKPMWGAWWVWDARLTSELILLFLYLGVMALYNAFDDQRTAARAAG
ILAIVGVINLPIIHFSVEWWNTLHQGASITKFDKLSISSDMLWPLLLNIIGFATFFGSVTLIRFRNEILAKESHRPWVRA
LVETKSTVSK

Sequences:

>Translated_250_residues
MWKWLHPYAKPEKAYQLSTTLLPWFAVISIISLTVGTIWGLAFAPSDYQQGDSFRIIYIHVPAAILSMAAYMSMAIAAFI
GLVWQLKLSDMAAAAMAPIGAVFTFIALLTGAVWGKPMWGAWWVWDARLTSELILLFLYLGVMALYNAFDDQRTAARAAG
ILAIVGVINLPIIHFSVEWWNTLHQGASITKFDKLSISSDMLWPLLLNIIGFATFFGSVTLIRFRNEILAKESHRPWVRA
LVETKSTVSK
>Mature_250_residues
MWKWLHPYAKPEKAYQLSTTLLPWFAVISIISLTVGTIWGLAFAPSDYQQGDSFRIIYIHVPAAILSMAAYMSMAIAAFI
GLVWQLKLSDMAAAAMAPIGAVFTFIALLTGAVWGKPMWGAWWVWDARLTSELILLFLYLGVMALYNAFDDQRTAARAAG
ILAIVGVINLPIIHFSVEWWNTLHQGASITKFDKLSISSDMLWPLLLNIIGFATFFGSVTLIRFRNEILAKESHRPWVRA
LVETKSTVSK

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=246, Percent_Identity=62.6016260162602, Blast_Score=314, Evalue=3e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27956; Mature: 27956

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKWLHPYAKPEKAYQLSTTLLPWFAVISIISLTVGTIWGLAFAPSDYQQGDSFRIIYIH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
VPAAILSMAAYMSMAIAAFIGLVWQLKLSDMAAAAMAPIGAVFTFIALLTGAVWGKPMWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWWVWDARLTSELILLFLYLGVMALYNAFDDQRTAARAAGILAIVGVINLPIIHFSVEWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEEEHHHH
NTLHQGASITKFDKLSISSDMLWPLLLNIIGFATFFGSVTLIRFRNEILAKESHRPWVRA
HHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LVETKSTVSK
HHHHHHHHCC
>Mature Secondary Structure
MWKWLHPYAKPEKAYQLSTTLLPWFAVISIISLTVGTIWGLAFAPSDYQQGDSFRIIYIH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEE
VPAAILSMAAYMSMAIAAFIGLVWQLKLSDMAAAAMAPIGAVFTFIALLTGAVWGKPMWG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
AWWVWDARLTSELILLFLYLGVMALYNAFDDQRTAARAAGILAIVGVINLPIIHFSVEWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHEEEHHHH
NTLHQGASITKFDKLSISSDMLWPLLLNIIGFATFFGSVTLIRFRNEILAKESHRPWVRA
HHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LVETKSTVSK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]