| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is ptsG [H]
Identifier: 209695688
GI number: 209695688
Start: 2421738
End: 2423168
Strand: Direct
Name: ptsG [H]
Synonym: VSAL_I2252
Alternate gene names: 209695688
Gene position: 2421738-2423168 (Clockwise)
Preceding gene: 209695687
Following gene: 209695692
Centisome position: 72.83
GC content: 42.28
Gene sequence:
>1431_bases ATGTTTAAAAACCTTTTTGCCAGTTTACAGAAAGTTGGTAAGGCACTTATGTTGCCAGTATCAGTTCTTCCTGTTGCTGG TATTCTTTTAGGAGTTGGTGCAGCCAACTTTAGTTTCCTTCCAGAAGTTGTTTCTCATTTAATGGAACAAGCTGGTGGTT CAGTATTCGGCCAAATGGCACTACTCTTTGCAGTTGGTGTTGCTCTTGGTTTCACAAATAATGACGGTGTAGCAGGTCTT TCTGCTATCGTTGGTTATGGCATCATGACAGCAACACTAGGCGTAATGGCTGAAGTGATGGGTGTTGATGGCATCGAAAC GGGTGTTCTTGGTGGTATTCTTGCGGGTGGTGTTGCTGGTTGGGCATTTAATCGTTTTTACCGTATTCAACTTCCTGAAT ATTTAGGCTTCTTTGCTGGTAAACGTGCAGTACCTATCATTACTGGTTTTGTATCAATTGCTTTGGGTGTGATTTTATCT GTTATCTGGCCACCAATTGGTTCAGTAATCGCGTCTTTCTCTGATTGGGCTGCTCATCAGAACCCAGTAGCTGCTTTTGG TATCTACGGTGTTGTTGAACGTTCTCTAATTCCTTTTGGTTTACACCATATCTGGAACGTACCATTCTTCTATGAAGCGG GTTCTTGTGTAAATAATGCGGGTGAACAAGTTCACGGTATTATGACTTGTTTCCTAACCGCTGATGATGCGTCTCGTGCT GCGAGTAATGGTTTCGGTCAACTTGCTGGTGGTTACTTGTTTAAAATGTTCGGTCTTCCTGCTGCTGCAATCGCGATTGC ACATTCAGCAAAACCTGAAAACCGTGCAAAAGTAATGGGTATCATGGCATCTGCTGCGTTAACTTCATTCCTTACTGGTA TTACAGAACCGATTGAATTTGCATTCTTATTTGTTGCTCCTGTTCTTTATGCTATTCACGCAGCTCTTGCTGGCGTGGCA TACATGCTGACTAACGCATTAGGTATTGTTCACGGTCACACATTCTCAAATGGTTTCATTGACTTCATTGTTCAATCTCC ACATGCTGAGAAAATGCCTCTTCTAATTGGATTAGGTCTTGTTTACGCTGCTGTTTACTACATCGTATTCCGCTTTGTGA TTAAAGCAATGAACCTTAAAACGCCAGGTCGTGAAGATGAAGATGACAATGCAGCTCCAGTAGTAACTGGTACTGAATTG GCAGGTGAACTTGTTGCTGCCTTTGGTGGTAAAGAGAACATCACCAACTTAGATGCTTGTATTACTCGCTTACGCGTTTC TGTAGCAAGTGTAGAAGCGGTAAACCAAGACAGACTGAAACAACTAGGTGCAGCAGGCGTTGTTGTTGCTGGTTCTGGTG TTCAGGCAATTTTTGGTACTAAATCAGATAACTTGAAAACAGACATGAATGAATGGATTAGCCATAACTAA
Upstream 100 bases:
>100_bases AGCCACGAATTAAGCTATCAGAATGTGAATTTGAACTAATCCTCGCTTAAAGCATGTTTTATCCAGAATTCAGGTTATTT ATAAATATTAGGAGCAAAAC
Downstream 100 bases:
>100_bases TTCCTGATTTTATGAATGAAAAAAAGGAGACTTTCGAGTCTCCTTTTTTATTGCCAGTCTAAAGAGTACGGTCTTTATTT TGAGGGAAACTGACTTCATG
Product: PTS system glucose-specific transporter subunits IIBC
Products: NA
Alternate protein names: EIICB-Glc; EII-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MFKNLFASLQKVGKALMLPVSVLPVAGILLGVGAANFSFLPEVVSHLMEQAGGSVFGQMALLFAVGVALGFTNNDGVAGL SAIVGYGIMTATLGVMAEVMGVDGIETGVLGGILAGGVAGWAFNRFYRIQLPEYLGFFAGKRAVPIITGFVSIALGVILS VIWPPIGSVIASFSDWAAHQNPVAAFGIYGVVERSLIPFGLHHIWNVPFFYEAGSCVNNAGEQVHGIMTCFLTADDASRA ASNGFGQLAGGYLFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHAALAGVA YMLTNALGIVHGHTFSNGFIDFIVQSPHAEKMPLLIGLGLVYAAVYYIVFRFVIKAMNLKTPGREDEDDNAAPVVTGTEL AGELVAAFGGKENITNLDACITRLRVSVASVEAVNQDRLKQLGAAGVVVAGSGVQAIFGTKSDNLKTDMNEWISHN
Sequences:
>Translated_476_residues MFKNLFASLQKVGKALMLPVSVLPVAGILLGVGAANFSFLPEVVSHLMEQAGGSVFGQMALLFAVGVALGFTNNDGVAGL SAIVGYGIMTATLGVMAEVMGVDGIETGVLGGILAGGVAGWAFNRFYRIQLPEYLGFFAGKRAVPIITGFVSIALGVILS VIWPPIGSVIASFSDWAAHQNPVAAFGIYGVVERSLIPFGLHHIWNVPFFYEAGSCVNNAGEQVHGIMTCFLTADDASRA ASNGFGQLAGGYLFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHAALAGVA YMLTNALGIVHGHTFSNGFIDFIVQSPHAEKMPLLIGLGLVYAAVYYIVFRFVIKAMNLKTPGREDEDDNAAPVVTGTEL AGELVAAFGGKENITNLDACITRLRVSVASVEAVNQDRLKQLGAAGVVVAGSGVQAIFGTKSDNLKTDMNEWISHN >Mature_476_residues MFKNLFASLQKVGKALMLPVSVLPVAGILLGVGAANFSFLPEVVSHLMEQAGGSVFGQMALLFAVGVALGFTNNDGVAGL SAIVGYGIMTATLGVMAEVMGVDGIETGVLGGILAGGVAGWAFNRFYRIQLPEYLGFFAGKRAVPIITGFVSIALGVILS VIWPPIGSVIASFSDWAAHQNPVAAFGIYGVVERSLIPFGLHHIWNVPFFYEAGSCVNNAGEQVHGIMTCFLTADDASRA ASNGFGQLAGGYLFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEFAFLFVAPVLYAIHAALAGVA YMLTNALGIVHGHTFSNGFIDFIVQSPHAEKMPLLIGLGLVYAAVYYIVFRFVIKAMNLKTPGREDEDDNAAPVVTGTEL AGELVAAFGGKENITNLDACITRLRVSVASVEAVNQDRLKQLGAAGVVVAGSGVQAIFGTKSDNLKTDMNEWISHN
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787343, Length=486, Percent_Identity=65.2263374485597, Blast_Score=613, Evalue=1e-177, Organism=Escherichia coli, GI1786894, Length=486, Percent_Identity=38.2716049382716, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI1787908, Length=519, Percent_Identity=33.140655105973, Blast_Score=256, Evalue=2e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 49853; Mature: 49853
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKNLFASLQKVGKALMLPVSVLPVAGILLGVGAANFSFLPEVVSHLMEQAGGSVFGQMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH LLFAVGVALGFTNNDGVAGLSAIVGYGIMTATLGVMAEVMGVDGIETGVLGGILAGGVAG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH WAFNRFYRIQLPEYLGFFAGKRAVPIITGFVSIALGVILSVIWPPIGSVIASFSDWAAHQ HHHHHEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC NPVAAFGIYGVVERSLIPFGLHHIWNVPFFYEAGSCVNNAGEQVHGIMTCFLTADDASRA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHEEEECCCHHHH ASNGFGQLAGGYLFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEF HCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH AFLFVAPVLYAIHAALAGVAYMLTNALGIVHGHTFSNGFIDFIVQSPHAEKMPLLIGLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCHHHHHHHH VYAAVYYIVFRFVIKAMNLKTPGREDEDDNAAPVVTGTELAGELVAAFGGKENITNLDAC HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHH ITRLRVSVASVEAVNQDRLKQLGAAGVVVAGSGVQAIFGTKSDNLKTDMNEWISHN HHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHCCC >Mature Secondary Structure MFKNLFASLQKVGKALMLPVSVLPVAGILLGVGAANFSFLPEVVSHLMEQAGGSVFGQMA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHH LLFAVGVALGFTNNDGVAGLSAIVGYGIMTATLGVMAEVMGVDGIETGVLGGILAGGVAG HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH WAFNRFYRIQLPEYLGFFAGKRAVPIITGFVSIALGVILSVIWPPIGSVIASFSDWAAHQ HHHHHEEEEECHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC NPVAAFGIYGVVERSLIPFGLHHIWNVPFFYEAGSCVNNAGEQVHGIMTCFLTADDASRA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHEEEECCCHHHH ASNGFGQLAGGYLFKMFGLPAAAIAIAHSAKPENRAKVMGIMASAALTSFLTGITEPIEF HCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHH AFLFVAPVLYAIHAALAGVAYMLTNALGIVHGHTFSNGFIDFIVQSPHAEKMPLLIGLGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCHHHHHHHH VYAAVYYIVFRFVIKAMNLKTPGREDEDDNAAPVVTGTELAGELVAAFGGKENITNLDAC HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHH ITRLRVSVASVEAVNQDRLKQLGAAGVVVAGSGVQAIFGTKSDNLKTDMNEWISHN HHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]