| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is norW [H]
Identifier: 209695637
GI number: 209695637
Start: 2365334
End: 2366479
Strand: Direct
Name: norW [H]
Synonym: VSAL_I2200
Alternate gene names: 209695637
Gene position: 2365334-2366479 (Clockwise)
Preceding gene: 209695636
Following gene: 209695638
Centisome position: 71.13
GC content: 40.31
Gene sequence:
>1146_bases ATGAGTTTACCAATCGTTATTATTGGCAGTGGTTTTGCTTCTTATCAACTAATTAAAACGATCCGTCGTACAGAAGTAGA TTGTCCTATTCATGTATTTACGAATGATGATGGCCACGATTATAACAAGCCAGATTTAAGTCATGTGTTTTCAAAGCAAC AGAGTCATGATGATGTAGTGACGCTATCAGGCTCCGATTTTTCTGAACAATACAATGTGGTATTGCATACCCGCACTTTA GTTGAGTCGATTGATACCATCAGTCAAACCATTACGGTGAAAGACGAGGTGTTTTCTTACGCTAAATTGGTATTAGCCAC GGGCTCTCAAACGTTTATCCCACCTTTTAAAGGGGACGGATGTGGTGAGATCCTTACGTTAAACAGCTTAAAAGAATTTG CGGTTATTCATAAAAAAGTGGTGAGTTCACAAAGCATACTCGTTATTGGTGGTGGACTGATAGGCACAGAGTTAACAATG GATCTTGCGGGTGCAGGTAAACACGTAACGGTGGTTGAGCCGAATACGCATCTTCTTGCCAATATGATCCCTGACTTTAT TTCTTTGCCTTTAGAGAATGCGTGCAGAGATAAAGGCGTGGTTATTACGCTTTCTGATGGTGTTCAAAGTGTAAATCAGA GTGGTAGTGGCTTTATAGTCACGACAATGAAGGGTCAGTCTTATCAAGTTGATTGTGTTATTTCAGCCGCTGGTCTAAAA CCCAATACTCAGTTAGCGAAAGACGCTGATATTCGTGTTAATCGTGGAGTTGTGGTGGATTCAACCTTACAAACGTCGGC TAGAAATGTGTATGCGTTAGGCGATTGCGCAGAAATAGAAGGCAAGGTAATGGCCTATCTTCAACCTATTTTACTGAGTG CAAATGCATTAGCTAAGACATTGCTGGGCTTGAACACGCCGTTGGTATTACCGAATATGATGGTGAAAGTGAAAACCCCT ATTTACCCAATACAGCTTGCGGGTAATACATCAAGTCATATCCATCGTTGGTCTATTGAACTTGATGAACAGGGGATATG TGCTAAAGCTTATGACGAAAAGGATAACCTAACCGGATTTGTTGTGACAAAAGAACAGATGAAAAAGGCATTTCCTTTAT TTAGAGAGATACATAATACGAATTAA
Upstream 100 bases:
>100_bases AACCAAACACGGCGTGGATTGATGTGCCCGATTATTTCTTATGCCCTGAGTGTAATTTAGGCAAAGATGTCTTTGTTGAA GTTAAATAGGGAGTGAAATA
Downstream 100 bases:
>100_bases TAGAGGTGAATTATGACAGAAATTCCTCATGGCTTAATAAAAGGCGTGGTTCTGAGTCGCTATGATTGGACCGATCGTTT ATTCAGTTTGTATGTTGAGG
Product: nitric oxide reductase
Products: NAD; reduced flavorubredoxin; H2O [C]
Alternate protein names: Flavorubredoxin reductase; FlRd-reductase; FlavoRb reductase [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSLPIVIIGSGFASYQLIKTIRRTEVDCPIHVFTNDDGHDYNKPDLSHVFSKQQSHDDVVTLSGSDFSEQYNVVLHTRTL VESIDTISQTITVKDEVFSYAKLVLATGSQTFIPPFKGDGCGEILTLNSLKEFAVIHKKVVSSQSILVIGGGLIGTELTM DLAGAGKHVTVVEPNTHLLANMIPDFISLPLENACRDKGVVITLSDGVQSVNQSGSGFIVTTMKGQSYQVDCVISAAGLK PNTQLAKDADIRVNRGVVVDSTLQTSARNVYALGDCAEIEGKVMAYLQPILLSANALAKTLLGLNTPLVLPNMMVKVKTP IYPIQLAGNTSSHIHRWSIELDEQGICAKAYDEKDNLTGFVVTKEQMKKAFPLFREIHNTN
Sequences:
>Translated_381_residues MSLPIVIIGSGFASYQLIKTIRRTEVDCPIHVFTNDDGHDYNKPDLSHVFSKQQSHDDVVTLSGSDFSEQYNVVLHTRTL VESIDTISQTITVKDEVFSYAKLVLATGSQTFIPPFKGDGCGEILTLNSLKEFAVIHKKVVSSQSILVIGGGLIGTELTM DLAGAGKHVTVVEPNTHLLANMIPDFISLPLENACRDKGVVITLSDGVQSVNQSGSGFIVTTMKGQSYQVDCVISAAGLK PNTQLAKDADIRVNRGVVVDSTLQTSARNVYALGDCAEIEGKVMAYLQPILLSANALAKTLLGLNTPLVLPNMMVKVKTP IYPIQLAGNTSSHIHRWSIELDEQGICAKAYDEKDNLTGFVVTKEQMKKAFPLFREIHNTN >Mature_380_residues SLPIVIIGSGFASYQLIKTIRRTEVDCPIHVFTNDDGHDYNKPDLSHVFSKQQSHDDVVTLSGSDFSEQYNVVLHTRTLV ESIDTISQTITVKDEVFSYAKLVLATGSQTFIPPFKGDGCGEILTLNSLKEFAVIHKKVVSSQSILVIGGGLIGTELTMD LAGAGKHVTVVEPNTHLLANMIPDFISLPLENACRDKGVVITLSDGVQSVNQSGSGFIVTTMKGQSYQVDCVISAAGLKP NTQLAKDADIRVNRGVVVDSTLQTSARNVYALGDCAEIEGKVMAYLQPILLSANALAKTLLGLNTPLVLPNMMVKVKTPI YPIQLAGNTSSHIHRWSIELDEQGICAKAYDEKDNLTGFVVTKEQMKKAFPLFREIHNTN
Specific function: One of at least two accessory proteins for anaerobic nitric oxide (NO) reductase. Reduces the rubredoxin moiety of NO reductase [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI4757732, Length=221, Percent_Identity=25.3393665158371, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI22202629, Length=221, Percent_Identity=25.3393665158371, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1789065, Length=377, Percent_Identity=44.2970822281167, Blast_Score=334, Evalue=6e-93, Organism=Escherichia coli, GI1788892, Length=275, Percent_Identity=25.4545454545455, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789765, Length=323, Percent_Identity=24.7678018575851, Blast_Score=78, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17559934, Length=280, Percent_Identity=25.7142857142857, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28573993, Length=314, Percent_Identity=22.2929936305732, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24581020, Length=314, Percent_Identity=22.2929936305732, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24639257, Length=278, Percent_Identity=23.021582733813, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI281359715, Length=278, Percent_Identity=23.021582733813, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI281359713, Length=278, Percent_Identity=23.021582733813, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24639250, Length=278, Percent_Identity=23.021582733813, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI18543267, Length=278, Percent_Identity=23.021582733813, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24639252, Length=278, Percent_Identity=23.021582733813, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 41375; Mature: 41244
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPIVIIGSGFASYQLIKTIRRTEVDCPIHVFTNDDGHDYNKPDLSHVFSKQQSHDDVV CCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCEE TLSGSDFSEQYNVVLHTRTLVESIDTISQTITVKDEVFSYAKLVLATGSQTFIPPFKGDG EECCCCCCCCEEEEEEHHHHHHHHHHHHHEEEEHHHHHHHHHHEEECCCCEECCCCCCCC CGEILTLNSLKEFAVIHKKVVSSQSILVIGGGLIGTELTMDLAGAGKHVTVVEPNTHLLA CCCEEEHHHHHHHHHHHHHHHCCCEEEEEECCEECCEEEEEECCCCCEEEEECCCCHHHH NMIPDFISLPLENACRDKGVVITLSDGVQSVNQSGSGFIVTTMKGQSYQVDCVISAAGLK HHHHHHHHCCCHHHCCCCCEEEEECCCHHHHCCCCCCEEEEEECCCCEEEEEEEEECCCC PNTQLAKDADIRVNRGVVVDSTLQTSARNVYALGDCAEIEGKVMAYLQPILLSANALAKT CCCCCCCCCCEEEECCEEEECHHHHCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHHH LLGLNTPLVLPNMMVKVKTPIYPIQLAGNTSSHIHRWSIELDEQGICAKAYDEKDNLTGF HHCCCCCEECCCEEEEEECCEEEEEECCCCCCCEEEEEEEECCCCCEEECCCCCCCCEEE VVTKEQMKKAFPLFREIHNTN EEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLPIVIIGSGFASYQLIKTIRRTEVDCPIHVFTNDDGHDYNKPDLSHVFSKQQSHDDVV CCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHCCCCCCCEE TLSGSDFSEQYNVVLHTRTLVESIDTISQTITVKDEVFSYAKLVLATGSQTFIPPFKGDG EECCCCCCCCEEEEEEHHHHHHHHHHHHHEEEEHHHHHHHHHHEEECCCCEECCCCCCCC CGEILTLNSLKEFAVIHKKVVSSQSILVIGGGLIGTELTMDLAGAGKHVTVVEPNTHLLA CCCEEEHHHHHHHHHHHHHHHCCCEEEEEECCEECCEEEEEECCCCCEEEEECCCCHHHH NMIPDFISLPLENACRDKGVVITLSDGVQSVNQSGSGFIVTTMKGQSYQVDCVISAAGLK HHHHHHHHCCCHHHCCCCCEEEEECCCHHHHCCCCCCEEEEEECCCCEEEEEEEEECCCC PNTQLAKDADIRVNRGVVVDSTLQTSARNVYALGDCAEIEGKVMAYLQPILLSANALAKT CCCCCCCCCCEEEECCEEEECHHHHCCCCEEEECCCHHCCCHHHHHHHHHHHHHHHHHHH LLGLNTPLVLPNMMVKVKTPIYPIQLAGNTSSHIHRWSIELDEQGICAKAYDEKDNLTGF HHCCCCCEECCCEEEEEECCEEEEEECCCCCCCEEEEEEEECCCCCEEECCCCCCCCEEE VVTKEQMKKAFPLFREIHNTN EEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; oxidized flavorubredoxin; O2 [C]
Specific reaction: NADH + oxidized flavorubredoxin + O2 = NAD + reduced flavorubredoxin + H2O [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA