BacMap

Definition	Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession	NC_011312
Length	3,325,165

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The map label for this gene is rhlE [H]

Identifier: 209695626

GI number: 209695626

Start: 2350959

End: 2352155

Strand: Reverse

Name: rhlE [H]

Synonym: VSAL_I2189

Alternate gene names: 209695626

Gene position: 2352155-2350959 (Counterclockwise)

Preceding gene: 209695627

Following gene: 209695622

Centisome position: 70.74

GC content: 40.27

Gene sequence:

>1197_bases
ATGCCATTTTCTAACCTTGGATTAAGTAATCCAATTTTAAAAGCCATTAATGAACTAGGCTACAAAGCCCCAACGCCAAT
TCAAGAAAAGGCGATTCCTGTTGCTCTAACAGGAAAAAACCTGATCGCAGCGGCACAAACTGGTACAGGTAAAACCGCAA
GTTTTGTATTACCAATCTTGCAAATGTTAAGTGAAGAACAAACGAAAGTTCGAGCAAAACGTATTCGTGCATTGATCTTA
ACGCCAACACGCGAACTTGCCGTTCAAGTTGAAGATAACATCAGTAAGTACAGCAAACATTTAGATCTTACGTCACTCGC
TATGTATGGTGGTGTTGATTATAAAGAGCAGAAACAACGCTTAATTGAAGGGGTTGATATTCTGGTTGCAACGCCTGGTC
GTTTGCTTGATATGTACACTCAACGTGCGGTACATTTTGACGAAATTGATATTCTCGTACTCGACGAAGCCGATAGAATG
CTAGACATGGGCTTTATCGAAGACATCAATAAAATTATTGAACGTTTACCGTTAGAACGCCAAAACTTATTGTTCTCAGC
AACCCTGTCAGAACAAGTTCGTGCATTGGCAAGAACAGCAATCAATAATCCAATTGAAATTACCATTGAGCGTAACAGTA
ACGCTGAGCCTAAAATTGACCAATGGTTAATTACGGTTGATAAAGACAAAAAATCGGCGCTAATCAGTCACCTAATTAAA
GAAAACGATTGGGATCAAGCGTTGATCTTCATCGAAACAAAACACGGTGCAGCGAAACTGGTAGGTCAACTTGAAAAACG
CGGCATTACCGCTGAAGCGTTCCACAGTGGTCGTAGCCAAGATGCTCGCTCAAAAGTATTGAATGACTTTAAAGAAGGTC
GTTTGAAGTATTTAGTCGCGACAGGGATTGCGGCTCGTGGTATTGATATCGATGAATTGACTCGAGTCATTAACTACGAC
TTACCGTTCCCTGCTGAAGATTATGTTCACCGTATTGGCCGTACAGGCCGTGCTGGTTCATCTGGTGAAGCGATTTCATT
TGTATCTCGAGATGATTTTAAGAACTTGTGTATGATTGAAAAACGTCTGGGTCACTTAATTGTCCGTAAAGAAATTGAAG
GATTCGTCCCTAATAAAGACGTACCAATTTCAATTTTGAACTTTAAACCGACAAGAAAACCAGCACCAAAATTTTAA

Upstream 100 bases:

>100_bases
TTCTCTTCCTCTCTTCATGCTACAATCCTCTCCTAATTTGCTCTCTGTTTATCGCTTTTGCTTTAAACTGTTTTTATTCT
TCATATACCTGAGATTTCAC

Downstream 100 bases:

>100_bases
GTACTATTTCTGTGTAACTCATTTATTCACTTAATGAGCGACAAAAAAACGCCCATTTCTATCATAAAGAAATGGGCGTT
TTTTTATTCAAATTACCTAC

Product: ATP-dependent RNA helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MPFSNLGLSNPILKAINELGYKAPTPIQEKAIPVALTGKNLIAAAQTGTGKTASFVLPILQMLSEEQTKVRAKRIRALIL
TPTRELAVQVEDNISKYSKHLDLTSLAMYGGVDYKEQKQRLIEGVDILVATPGRLLDMYTQRAVHFDEIDILVLDEADRM
LDMGFIEDINKIIERLPLERQNLLFSATLSEQVRALARTAINNPIEITIERNSNAEPKIDQWLITVDKDKKSALISHLIK
ENDWDQALIFIETKHGAAKLVGQLEKRGITAEAFHSGRSQDARSKVLNDFKEGRLKYLVATGIAARGIDIDELTRVINYD
LPFPAEDYVHRIGRTGRAGSSGEAISFVSRDDFKNLCMIEKRLGHLIVRKEIEGFVPNKDVPISILNFKPTRKPAPKF

Sequences:

>Translated_398_residues
MPFSNLGLSNPILKAINELGYKAPTPIQEKAIPVALTGKNLIAAAQTGTGKTASFVLPILQMLSEEQTKVRAKRIRALIL
TPTRELAVQVEDNISKYSKHLDLTSLAMYGGVDYKEQKQRLIEGVDILVATPGRLLDMYTQRAVHFDEIDILVLDEADRM
LDMGFIEDINKIIERLPLERQNLLFSATLSEQVRALARTAINNPIEITIERNSNAEPKIDQWLITVDKDKKSALISHLIK
ENDWDQALIFIETKHGAAKLVGQLEKRGITAEAFHSGRSQDARSKVLNDFKEGRLKYLVATGIAARGIDIDELTRVINYD
LPFPAEDYVHRIGRTGRAGSSGEAISFVSRDDFKNLCMIEKRLGHLIVRKEIEGFVPNKDVPISILNFKPTRKPAPKF
>Mature_397_residues
PFSNLGLSNPILKAINELGYKAPTPIQEKAIPVALTGKNLIAAAQTGTGKTASFVLPILQMLSEEQTKVRAKRIRALILT
PTRELAVQVEDNISKYSKHLDLTSLAMYGGVDYKEQKQRLIEGVDILVATPGRLLDMYTQRAVHFDEIDILVLDEADRML
DMGFIEDINKIIERLPLERQNLLFSATLSEQVRALARTAINNPIEITIERNSNAEPKIDQWLITVDKDKKSALISHLIKE
NDWDQALIFIETKHGAAKLVGQLEKRGITAEAFHSGRSQDARSKVLNDFKEGRLKYLVATGIAARGIDIDELTRVINYDL
PFPAEDYVHRIGRTGRAGSSGEAISFVSRDDFKNLCMIEKRLGHLIVRKEIEGFVPNKDVPISILNFKPTRKPAPKF

Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI224593278, Length=360, Percent_Identity=39.1666666666667, Blast_Score=269, Evalue=3e-72,
Organism=Homo sapiens, GI20149629, Length=386, Percent_Identity=36.2694300518135, Blast_Score=257, Evalue=1e-68,
Organism=Homo sapiens, GI41327773, Length=353, Percent_Identity=38.2436260623229, Blast_Score=253, Evalue=2e-67,
Organism=Homo sapiens, GI41327771, Length=383, Percent_Identity=36.5535248041775, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI222352149, Length=346, Percent_Identity=39.8843930635838, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI169881239, Length=395, Percent_Identity=38.2278481012658, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI13514809, Length=395, Percent_Identity=38.2278481012658, Blast_Score=248, Evalue=1e-65,
Organism=Homo sapiens, GI164419743, Length=368, Percent_Identity=37.7717391304348, Blast_Score=246, Evalue=2e-65,
Organism=Homo sapiens, GI51094101, Length=368, Percent_Identity=37.7717391304348, Blast_Score=246, Evalue=2e-65,
Organism=Homo sapiens, GI301171475, Length=395, Percent_Identity=37.4683544303797, Blast_Score=245, Evalue=6e-65,
Organism=Homo sapiens, GI87196351, Length=395, Percent_Identity=37.4683544303797, Blast_Score=245, Evalue=6e-65,
Organism=Homo sapiens, GI301171467, Length=395, Percent_Identity=37.4683544303797, Blast_Score=244, Evalue=7e-65,
Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=37.0786516853933, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI216548263, Length=349, Percent_Identity=38.3954154727794, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI262231852, Length=349, Percent_Identity=38.3954154727794, Blast_Score=239, Evalue=4e-63,
Organism=Homo sapiens, GI13518015, Length=349, Percent_Identity=38.3954154727794, Blast_Score=238, Evalue=5e-63,
Organism=Homo sapiens, GI164664518, Length=363, Percent_Identity=34.7107438016529, Blast_Score=237, Evalue=1e-62,
Organism=Homo sapiens, GI4758138, Length=350, Percent_Identity=37.4285714285714, Blast_Score=236, Evalue=2e-62,
Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=35.7541899441341, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=35.7541899441341, Blast_Score=235, Evalue=6e-62,
Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=36.1344537815126, Blast_Score=234, Evalue=7e-62,
Organism=Homo sapiens, GI55749865, Length=346, Percent_Identity=37.8612716763006, Blast_Score=234, Evalue=8e-62,
Organism=Homo sapiens, GI7661920, Length=360, Percent_Identity=35, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI45446747, Length=352, Percent_Identity=36.3636363636364, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI45446743, Length=352, Percent_Identity=36.3636363636364, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=37.17277486911, Blast_Score=233, Evalue=3e-61,
Organism=Homo sapiens, GI41327779, Length=354, Percent_Identity=36.1581920903955, Blast_Score=231, Evalue=1e-60,
Organism=Homo sapiens, GI41327776, Length=386, Percent_Identity=33.9378238341969, Blast_Score=223, Evalue=2e-58,
Organism=Homo sapiens, GI188035877, Length=366, Percent_Identity=34.9726775956284, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI13514831, Length=348, Percent_Identity=37.0689655172414, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI83700235, Length=360, Percent_Identity=36.1111111111111, Blast_Score=205, Evalue=6e-53,
Organism=Homo sapiens, GI4503529, Length=360, Percent_Identity=35.8333333333333, Blast_Score=204, Evalue=1e-52,
Organism=Homo sapiens, GI50659095, Length=376, Percent_Identity=35.3723404255319, Blast_Score=199, Evalue=3e-51,
Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=30.5084745762712, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=30.7909604519774, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=30.7909604519774, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI13129006, Length=373, Percent_Identity=34.0482573726542, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI38569503, Length=353, Percent_Identity=33.4277620396601, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI38569505, Length=353, Percent_Identity=33.4277620396601, Blast_Score=195, Evalue=6e-50,
Organism=Homo sapiens, GI17505907, Length=398, Percent_Identity=32.1608040201005, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI38327634, Length=385, Percent_Identity=33.2467532467532, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI9506931, Length=418, Percent_Identity=30.622009569378, Blast_Score=188, Evalue=6e-48,
Organism=Homo sapiens, GI6005743, Length=365, Percent_Identity=34.2465753424658, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI8922886, Length=365, Percent_Identity=34.5205479452055, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI62241022, Length=349, Percent_Identity=34.6704871060172, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI256223453, Length=366, Percent_Identity=30.6010928961749, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI164419732, Length=371, Percent_Identity=32.8840970350404, Blast_Score=171, Evalue=9e-43,
Organism=Homo sapiens, GI62241024, Length=327, Percent_Identity=34.5565749235474, Blast_Score=162, Evalue=5e-40,
Organism=Homo sapiens, GI20336298, Length=214, Percent_Identity=39.2523364485981, Blast_Score=147, Evalue=1e-35,
Organism=Homo sapiens, GI256773275, Length=378, Percent_Identity=30.4232804232804, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI4826686, Length=345, Percent_Identity=32.1739130434783, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=29.7805642633229, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI154759257, Length=405, Percent_Identity=26.1728395061728, Blast_Score=133, Evalue=3e-31,
Organism=Escherichia coli, GI1787016, Length=382, Percent_Identity=53.6649214659686, Blast_Score=412, Evalue=1e-116,
Organism=Escherichia coli, GI87082221, Length=362, Percent_Identity=42.5414364640884, Blast_Score=295, Evalue=5e-81,
Organism=Escherichia coli, GI1790214, Length=369, Percent_Identity=40.9214092140921, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1788930, Length=381, Percent_Identity=37.7952755905512, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI1787605, Length=363, Percent_Identity=38.8429752066116, Blast_Score=234, Evalue=1e-62,
Organism=Escherichia coli, GI48994977, Length=363, Percent_Identity=23.4159779614325, Blast_Score=88, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=36.1477572559367, Blast_Score=256, Evalue=1e-68,
Organism=Caenorhabditis elegans, GI71995514, Length=376, Percent_Identity=38.8297872340425, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17510307, Length=376, Percent_Identity=38.8297872340425, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17510309, Length=376, Percent_Identity=38.8297872340425, Blast_Score=249, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI17555296, Length=363, Percent_Identity=36.9146005509642, Blast_Score=248, Evalue=5e-66,
Organism=Caenorhabditis elegans, GI17510559, Length=384, Percent_Identity=36.71875, Blast_Score=244, Evalue=6e-65,
Organism=Caenorhabditis elegans, GI71987143, Length=359, Percent_Identity=36.2116991643454, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI115533224, Length=347, Percent_Identity=39.193083573487, Blast_Score=238, Evalue=4e-63,
Organism=Caenorhabditis elegans, GI71995718, Length=389, Percent_Identity=39.0745501285347, Blast_Score=237, Evalue=7e-63,
Organism=Caenorhabditis elegans, GI71995724, Length=360, Percent_Identity=36.6666666666667, Blast_Score=235, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17507121, Length=360, Percent_Identity=36.3888888888889, Blast_Score=235, Evalue=4e-62,
Organism=Caenorhabditis elegans, GI86570094, Length=392, Percent_Identity=35.7142857142857, Blast_Score=233, Evalue=2e-61,
Organism=Caenorhabditis elegans, GI71999646, Length=367, Percent_Identity=35.6948228882834, Blast_Score=232, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=34.3490304709141, Blast_Score=231, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI71999644, Length=356, Percent_Identity=35.9550561797753, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=36.5853658536585, Blast_Score=228, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17507945, Length=340, Percent_Identity=37.3529411764706, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17552642, Length=390, Percent_Identity=34.3589743589744, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17509811, Length=357, Percent_Identity=35.0140056022409, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI17507877, Length=371, Percent_Identity=34.7708894878706, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI115532546, Length=372, Percent_Identity=33.6021505376344, Blast_Score=206, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI115532548, Length=372, Percent_Identity=33.6021505376344, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17507881, Length=372, Percent_Identity=34.9462365591398, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI17507879, Length=371, Percent_Identity=35.3099730458221, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71982858, Length=366, Percent_Identity=30.327868852459, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17505370, Length=340, Percent_Identity=33.2352941176471, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17536099, Length=382, Percent_Identity=34.5549738219895, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17536101, Length=382, Percent_Identity=34.5549738219895, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17508543, Length=374, Percent_Identity=30.2139037433155, Blast_Score=173, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI193208216, Length=384, Percent_Identity=32.03125, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17536103, Length=382, Percent_Identity=34.5549738219895, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI25148203, Length=417, Percent_Identity=27.5779376498801, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=34.1880341880342, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI193206561, Length=382, Percent_Identity=29.5811518324607, Blast_Score=169, Evalue=2e-42,
Organism=Caenorhabditis elegans, GI17553716, Length=356, Percent_Identity=29.2134831460674, Blast_Score=157, Evalue=7e-39,
Organism=Caenorhabditis elegans, GI17556951, Length=355, Percent_Identity=30.4225352112676, Blast_Score=151, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI17507641, Length=413, Percent_Identity=30.5084745762712, Blast_Score=150, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI32564046, Length=389, Percent_Identity=30.0771208226221, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71997889, Length=395, Percent_Identity=25.5696202531646, Blast_Score=121, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI25148205, Length=342, Percent_Identity=25.4385964912281, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=31.8627450980392, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI25148291, Length=366, Percent_Identity=26.5027322404372, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=93, Percent_Identity=43.010752688172, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=38.5269121813031, Blast_Score=248, Evalue=9e-67,
Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=36.7403314917127, Blast_Score=248, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6324778, Length=365, Percent_Identity=39.4520547945205, Blast_Score=247, Evalue=3e-66,
Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=36.9973190348526, Blast_Score=245, Evalue=7e-66,
Organism=Saccharomyces cerevisiae, GI6325138, Length=365, Percent_Identity=40.2739726027397, Blast_Score=245, Evalue=9e-66,
Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=38.9204545454545, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6321360, Length=360, Percent_Identity=39.7222222222222, Blast_Score=242, Evalue=8e-65,
Organism=Saccharomyces cerevisiae, GI6320224, Length=363, Percent_Identity=35.5371900826446, Blast_Score=240, Evalue=4e-64,
Organism=Saccharomyces cerevisiae, GI6320173, Length=425, Percent_Identity=31.0588235294118, Blast_Score=211, Evalue=2e-55,
Organism=Saccharomyces cerevisiae, GI6320449, Length=355, Percent_Identity=34.9295774647887, Blast_Score=205, Evalue=9e-54,
Organism=Saccharomyces cerevisiae, GI6323947, Length=351, Percent_Identity=32.7635327635328, Blast_Score=202, Evalue=1e-52,
Organism=Saccharomyces cerevisiae, GI6322912, Length=360, Percent_Identity=34.7222222222222, Blast_Score=199, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6322323, Length=360, Percent_Identity=34.7222222222222, Blast_Score=199, Evalue=6e-52,
Organism=Saccharomyces cerevisiae, GI6324620, Length=375, Percent_Identity=34.4, Blast_Score=199, Evalue=9e-52,
Organism=Saccharomyces cerevisiae, GI6322427, Length=354, Percent_Identity=32.7683615819209, Blast_Score=192, Evalue=8e-50,
Organism=Saccharomyces cerevisiae, GI6320119, Length=384, Percent_Identity=30.46875, Blast_Score=191, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6319714, Length=395, Percent_Identity=30.8860759493671, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6321111, Length=371, Percent_Identity=31.5363881401617, Blast_Score=181, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6321963, Length=375, Percent_Identity=31.4666666666667, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6320400, Length=410, Percent_Identity=31.4634146341463, Blast_Score=172, Evalue=8e-44,
Organism=Saccharomyces cerevisiae, GI6321267, Length=360, Percent_Identity=32.5, Blast_Score=166, Evalue=8e-42,
Organism=Saccharomyces cerevisiae, GI6323306, Length=410, Percent_Identity=29.0243902439024, Blast_Score=162, Evalue=9e-41,
Organism=Saccharomyces cerevisiae, GI6319618, Length=415, Percent_Identity=32.7710843373494, Blast_Score=158, Evalue=1e-39,
Organism=Saccharomyces cerevisiae, GI6324366, Length=348, Percent_Identity=25.8620689655172, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6321374, Length=399, Percent_Identity=26.0651629072682, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6322876, Length=224, Percent_Identity=33.4821428571429, Blast_Score=107, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6323844, Length=376, Percent_Identity=23.936170212766, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24584399, Length=347, Percent_Identity=40.3458213256484, Blast_Score=271, Evalue=5e-73,
Organism=Drosophila melanogaster, GI24642151, Length=351, Percent_Identity=37.3219373219373, Blast_Score=254, Evalue=8e-68,
Organism=Drosophila melanogaster, GI24585582, Length=365, Percent_Identity=36.986301369863, Blast_Score=252, Evalue=3e-67,
Organism=Drosophila melanogaster, GI24584994, Length=383, Percent_Identity=37.3368146214099, Blast_Score=251, Evalue=5e-67,
Organism=Drosophila melanogaster, GI17985987, Length=376, Percent_Identity=39.6276595744681, Blast_Score=251, Evalue=6e-67,
Organism=Drosophila melanogaster, GI28574962, Length=355, Percent_Identity=37.7464788732394, Blast_Score=245, Evalue=4e-65,
Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=36.8715083798883, Blast_Score=245, Evalue=5e-65,
Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=36.8715083798883, Blast_Score=245, Evalue=5e-65,
Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=36.8715083798883, Blast_Score=245, Evalue=5e-65,
Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=36.8715083798883, Blast_Score=244, Evalue=6e-65,
Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=36.8715083798883, Blast_Score=244, Evalue=6e-65,
Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=36.8715083798883, Blast_Score=244, Evalue=7e-65,
Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=36.8715083798883, Blast_Score=244, Evalue=7e-65,
Organism=Drosophila melanogaster, GI21355075, Length=347, Percent_Identity=40.0576368876081, Blast_Score=244, Evalue=7e-65,
Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=38.7640449438202, Blast_Score=244, Evalue=1e-64,
Organism=Drosophila melanogaster, GI24662330, Length=375, Percent_Identity=36.8, Blast_Score=238, Evalue=5e-63,
Organism=Drosophila melanogaster, GI18857967, Length=364, Percent_Identity=36.5384615384615, Blast_Score=238, Evalue=7e-63,
Organism=Drosophila melanogaster, GI17977678, Length=385, Percent_Identity=35.3246753246753, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI24583281, Length=362, Percent_Identity=35.0828729281768, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI24583279, Length=362, Percent_Identity=35.0828729281768, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI28575014, Length=358, Percent_Identity=36.5921787709497, Blast_Score=227, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24645031, Length=360, Percent_Identity=35.8333333333333, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI17136814, Length=371, Percent_Identity=38.2749326145553, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI24582080, Length=360, Percent_Identity=34.4444444444444, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24582078, Length=360, Percent_Identity=34.4444444444444, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI17136248, Length=360, Percent_Identity=34.4444444444444, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24582075, Length=360, Percent_Identity=34.4444444444444, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI281365720, Length=311, Percent_Identity=36.0128617363344, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=30.327868852459, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=30.327868852459, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=30.327868852459, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=33.0687830687831, Blast_Score=188, Evalue=5e-48,
Organism=Drosophila melanogaster, GI28571808, Length=345, Percent_Identity=31.304347826087, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI28571809, Length=345, Percent_Identity=31.304347826087, Blast_Score=185, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24666101, Length=348, Percent_Identity=35.0574712643678, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24642822, Length=371, Percent_Identity=32.0754716981132, Blast_Score=178, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24643725, Length=414, Percent_Identity=29.951690821256, Blast_Score=174, Evalue=9e-44,
Organism=Drosophila melanogaster, GI17647335, Length=357, Percent_Identity=30.2521008403361, Blast_Score=166, Evalue=2e-41,
Organism=Drosophila melanogaster, GI20130173, Length=452, Percent_Identity=29.2035398230088, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI24640164, Length=367, Percent_Identity=27.7929155313352, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=31.1926605504587, Blast_Score=140, Evalue=1e-33,
Organism=Drosophila melanogaster, GI19920478, Length=342, Percent_Identity=29.2397660818713, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI28571338, Length=219, Percent_Identity=35.1598173515982, Blast_Score=131, Evalue=9e-31,
Organism=Drosophila melanogaster, GI18859659, Length=219, Percent_Identity=35.1598173515982, Blast_Score=131, Evalue=9e-31,
Organism=Drosophila melanogaster, GI17136666, Length=420, Percent_Identity=26.4285714285714, Blast_Score=130, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 44573; Mature: 44442

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFSNLGLSNPILKAINELGYKAPTPIQEKAIPVALTGKNLIAAAQTGTGKTASFVLPIL
CCCCCCCCCCHHHHHHHHCCCCCCCCHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHH
QMLSEEQTKVRAKRIRALILTPTRELAVQVEDNISKYSKHLDLTSLAMYGGVDYKEQKQR
HHHHHHHHHHHHHHHHEEEECCCHHHEEEEHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH
LIEGVDILVATPGRLLDMYTQRAVHFDEIDILVLDEADRMLDMGFIEDINKIIERLPLER
HHCCCEEEEECCHHHHHHHHHHCCEECCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCH
QNLLFSATLSEQVRALARTAINNPIEITIERNSNAEPKIDQWLITVDKDKKSALISHLIK
HHEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHH
ENDWDQALIFIETKHGAAKLVGQLEKRGITAEAFHSGRSQDARSKVLNDFKEGRLKYLVA
CCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCEEEEEE
TGIAARGIDIDELTRVINYDLPFPAEDYVHRIGRTGRAGSSGEAISFVSRDDFKNLCMIE
CCCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHCHHHHHHHH
KRLGHLIVRKEIEGFVPNKDVPISILNFKPTRKPAPKF
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
PFSNLGLSNPILKAINELGYKAPTPIQEKAIPVALTGKNLIAAAQTGTGKTASFVLPIL
CCCCCCCCCHHHHHHHHCCCCCCCCHHHCCEEEEEECCCEEEEECCCCCCHHHHHHHHH
QMLSEEQTKVRAKRIRALILTPTRELAVQVEDNISKYSKHLDLTSLAMYGGVDYKEQKQR
HHHHHHHHHHHHHHHHEEEECCCHHHEEEEHHHHHHHHHHCCHHHHHHHCCCCHHHHHHH
LIEGVDILVATPGRLLDMYTQRAVHFDEIDILVLDEADRMLDMGFIEDINKIIERLPLER
HHCCCEEEEECCHHHHHHHHHHCCEECCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCH
QNLLFSATLSEQVRALARTAINNPIEITIERNSNAEPKIDQWLITVDKDKKSALISHLIK
HHEEEEHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHH
ENDWDQALIFIETKHGAAKLVGQLEKRGITAEAFHSGRSQDARSKVLNDFKEGRLKYLVA
CCCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHCCEEEEEE
TGIAARGIDIDELTRVINYDLPFPAEDYVHRIGRTGRAGSSGEAISFVSRDDFKNLCMIE
CCCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECHHCHHHHHHHH
KRLGHLIVRKEIEGFVPNKDVPISILNFKPTRKPAPKF
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]