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The map label for this gene is yfcN [C]

Identifier: 209695605

GI number: 209695605

Start: 2328885

End: 2329418

Strand: Reverse

Name: yfcN [C]

Synonym: VSAL_I2166

Alternate gene names: 209695605

Gene position: 2329418-2328885 (Counterclockwise)

Preceding gene: 209695608

Following gene: 209695600

Centisome position: 70.05

GC content: 41.76

Gene sequence:

>534_bases
ATGAGTAAAAACGACCACCTATCAGATGACGAACTTTCTCTGTTCCGTGAAGCAGTACAAGGCTCTAAAAAGTTGCGACA
GGATACCATAATCCATCAACCGAGTAAGAACTTTAGCGAACAACAAAAGCAAAGAAAATCATTAAAAGAAGGGAAAAATG
AAGAGTTTTTCTTTTCTGACGAATTTGTCCCACTTCTTAATGAAGACGGCCCAGTTCGCTACGCGCGTGATGGCGTATCA
AAGTATGAAGTAAAGCGTCTACGACGTGGGGTTTATGTCCCTGATGTATTTTTAGATATGCATGGCATGAAGCAAGATGA
AGCCAAACGAGAGTTAGGCTCAATGATTGCGTATTGCTTAAAAGAAAATATATCTTGTGCCAGTGTCATGCACGGTATCG
GCAAGCACATATTGAAACAAAAAGTCCCTTTATGGCTAGCCCAACACCCAGACGTAATGGCATTCCATCAAGCACCTTTA
GAATTTGGTGGCGCAGGCGCCATTTTAGTTTTACTTTCGATCCCAGACCGATAA

Upstream 100 bases:

>100_bases
GTAACGTATGAAGCTCAGAAACTGCCTCTTCTACAAAAATCTTATCCAAAATTGCCCCCAAAACAAGTACAATACTGCTG
TTAATTATTGGAATCTAAAA

Downstream 100 bases:

>100_bases
TATAATTTGAGGGAATAACGTACCCTCAAATTATCTCTCTTTATTTATGGCTGCTGTAACCACAATAAATCGCTTTTTCC
TGTCTGATGAGAAAACTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSKNDHLSDDELSLFREAVQGSKKLRQDTIIHQPSKNFSEQQKQRKSLKEGKNEEFFFSDEFVPLLNEDGPVRYARDGVS
KYEVKRLRRGVYVPDVFLDMHGMKQDEAKRELGSMIAYCLKENISCASVMHGIGKHILKQKVPLWLAQHPDVMAFHQAPL
EFGGAGAILVLLSIPDR

Sequences:

>Translated_177_residues
MSKNDHLSDDELSLFREAVQGSKKLRQDTIIHQPSKNFSEQQKQRKSLKEGKNEEFFFSDEFVPLLNEDGPVRYARDGVS
KYEVKRLRRGVYVPDVFLDMHGMKQDEAKRELGSMIAYCLKENISCASVMHGIGKHILKQKVPLWLAQHPDVMAFHQAPL
EFGGAGAILVLLSIPDR
>Mature_176_residues
SKNDHLSDDELSLFREAVQGSKKLRQDTIIHQPSKNFSEQQKQRKSLKEGKNEEFFFSDEFVPLLNEDGPVRYARDGVSK
YEVKRLRRGVYVPDVFLDMHGMKQDEAKRELGSMIAYCLKENISCASVMHGIGKHILKQKVPLWLAQHPDVMAFHQAPLE
FGGAGAILVLLSIPDR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=174, Percent_Identity=52.2988505747126, Blast_Score=205, Evalue=1e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20196; Mature: 20065

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNDHLSDDELSLFREAVQGSKKLRQDTIIHQPSKNFSEQQKQRKSLKEGKNEEFFFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECC
EFVPLLNEDGPVRYARDGVSKYEVKRLRRGVYVPDVFLDMHGMKQDEAKRELGSMIAYCL
CCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
KENISCASVMHGIGKHILKQKVPLWLAQHPDVMAFHQAPLEFGGAGAILVLLSIPDR
HCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCCC
>Mature Secondary Structure 
SKNDHLSDDELSLFREAVQGSKKLRQDTIIHQPSKNFSEQQKQRKSLKEGKNEEFFFSD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEECC
EFVPLLNEDGPVRYARDGVSKYEVKRLRRGVYVPDVFLDMHGMKQDEAKRELGSMIAYCL
CCCCCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHH
KENISCASVMHGIGKHILKQKVPLWLAQHPDVMAFHQAPLEFGGAGAILVLLSIPDR
HCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHCCCCCCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA