| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695537
Identifier: 209695537
GI number: 209695537
Start: 2243054
End: 2243683
Strand: Reverse
Name: 209695537
Synonym: VSAL_I2093
Alternate gene names: NA
Gene position: 2243683-2243054 (Counterclockwise)
Preceding gene: 209695538
Following gene: 209695536
Centisome position: 67.48
GC content: 39.21
Gene sequence:
>630_bases ATGAAAAGAATATCGCTACGATTAATACACTCTATTATTTTTATAGTGTCATTAAGCTTACTGGGTTGTGCCTCTGCACC GATCAAAAAAGCCAATCAAGTTGAAGTATCTCCAGAGCAATTTGTGACTTTACCGCAACCAAATCAATATGGGTCGGATA TATCGTTAAGCCAGTTAATTTCAGTAAATTGGCATGGTGGTAAGCAACAATTACCTGTACAGCTGCAATTAACAGGTAAT AAACTTGTGTTAGCTGGATTTGCCTCGTGGGGCTCTCGTATCCTTAGTTTGGATTACGATGGACAGACATTGAATACTTA CGTTATGGCCGGGTTGTCAGAGACACTGCCACCGCCAGAGCAAGTTTTATTTAATGTCATGATCACATTGTGGCCGGCAG AGGCTTGGAAAGCATCGTTAGATTCTATTGGTTGGAGTCTGCAAGACATCGGAAACCAACGCGTATTATCAAACGATTTT GGTAAGACGATTCTTATTATTGATTACTCTTCTATTGAAGATAAATTAAGTGGCGATATTATTTTAACGAGCCCGCATCT GGGGTATGTTATTACAATCAAAACGTTTGCAAACGCTCAGTCTGTCATGACTAAAAAGAAGAATGGATAA
Upstream 100 bases:
>100_bases TTTGGTATTACGGTACTGACGGGTATCATCGTGGCTTGGTTATTGGCCCCCTTGAGTCAAAATATGAACCCACACAATAA AGTTCGATAGGACAGAGTGA
Downstream 100 bases:
>100_bases AAGTAAGATGAGTGATTTTCCTGTATATATTCATGCTTGTGGTTCGCATTCAGCATTAGGCAAAGAGAGCAATGATATTC ATCAGGCTCTCAATGGTAAT
Product: lipoprotein
Products: UMP; Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala)-; $diphosphoundecaprenol
Alternate protein names: Phospho-N-Acetylmuramoyl-Pentapeptide-Transferase
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MKRISLRLIHSIIFIVSLSLLGCASAPIKKANQVEVSPEQFVTLPQPNQYGSDISLSQLISVNWHGGKQQLPVQLQLTGN KLVLAGFASWGSRILSLDYDGQTLNTYVMAGLSETLPPPEQVLFNVMITLWPAEAWKASLDSIGWSLQDIGNQRVLSNDF GKTILIIDYSSIEDKLSGDIILTSPHLGYVITIKTFANAQSVMTKKKNG
Sequences:
>Translated_209_residues MKRISLRLIHSIIFIVSLSLLGCASAPIKKANQVEVSPEQFVTLPQPNQYGSDISLSQLISVNWHGGKQQLPVQLQLTGN KLVLAGFASWGSRILSLDYDGQTLNTYVMAGLSETLPPPEQVLFNVMITLWPAEAWKASLDSIGWSLQDIGNQRVLSNDF GKTILIIDYSSIEDKLSGDIILTSPHLGYVITIKTFANAQSVMTKKKNG >Mature_209_residues MKRISLRLIHSIIFIVSLSLLGCASAPIKKANQVEVSPEQFVTLPQPNQYGSDISLSQLISVNWHGGKQQLPVQLQLTGN KLVLAGFASWGSRILSLDYDGQTLNTYVMAGLSETLPPPEQVLFNVMITLWPAEAWKASLDSIGWSLQDIGNQRVLSNDF GKTILIIDYSSIEDKLSGDIILTSPHLGYVITIKTFANAQSVMTKKKNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.8.13
Molecular weight: Translated: 22927; Mature: 22927
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRISLRLIHSIIFIVSLSLLGCASAPIKKANQVEVSPEQFVTLPQPNQYGSDISLSQLI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHEEECCCCCCCCCCCCHHHEE SVNWHGGKQQLPVQLQLTGNKLVLAGFASWGSRILSLDYDGQTLNTYVMAGLSETLPPPE EEEECCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEECCCCCHHHHEECCHHHCCCCHH QVLFNVMITLWPAEAWKASLDSIGWSLQDIGNQRVLSNDFGKTILIIDYSSIEDKLSGDI HHHHHHHHHEECCHHHHHHHHHHCCCHHHCCCCCEECCCCCCEEEEEECCCCHHHCCCCE ILTSPHLGYVITIKTFANAQSVMTKKKNG EEECCCCCEEEEEEECCCHHHHHHCCCCC >Mature Secondary Structure MKRISLRLIHSIIFIVSLSLLGCASAPIKKANQVEVSPEQFVTLPQPNQYGSDISLSQLI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHEEECCCCCCCCCCCCHHHEE SVNWHGGKQQLPVQLQLTGNKLVLAGFASWGSRILSLDYDGQTLNTYVMAGLSETLPPPE EEEECCCCCCCCEEEEECCCEEEEEEECCCCCEEEEEECCCCCHHHHEECCHHHCCCCHH QVLFNVMITLWPAEAWKASLDSIGWSLQDIGNQRVLSNDFGKTILIIDYSSIEDKLSGDI HHHHHHHHHEECCHHHHHHHHHHCCCHHHCCCCCEECCCCCCEEEEEECCCCHHHCCCCE ILTSPHLGYVITIKTFANAQSVMTKKKNG EEECCCCCEEEEEEECCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala); undecaprenyl phosphate
Specific reaction: UDP-Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D-Ala-D-Ala) + undecaprenyl phosphate = UMP + Mur2Ac(oyl-L-Ala-gamma-D-Glu-L-Lys-D- $Ala-D-Ala)-diphosphoundecaprenol
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA