Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695383

Identifier: 209695383

GI number: 209695383

Start: 2050803

End: 2051120

Strand: Reverse

Name: 209695383

Synonym: VSAL_I1917

Alternate gene names: NA

Gene position: 2051120-2050803 (Counterclockwise)

Preceding gene: 209695384

Following gene: 209695382

Centisome position: 61.68

GC content: 43.71

Gene sequence:

>318_bases
ATGGAAGATACACAATACGTTGTGGAATGGGGTGATACGATTACCCTAAGCTTTGAAGGCGCCCAAATTGTTTCTGCATA
TCACACTTGCCCAGAAGAAGGCGATGAGATTGAGCTAGACTTTGGCGAAGGTTGGTTCCAAGGCCCTGACGATGAAGAAT
ATCGTATCGAGATGCAGTTAGCACCTTTCCATCCTTATGATGAAGATCCTGTTCGTCTAGCAAACATCACCATTAATGGT
GAGATTGTGAAAATTCTAGAAATTACAGAAACCGCTGATGGTGAGTTCTTCATCGAACCAAGCGACGGCGATTACTAA

Upstream 100 bases:

>100_bases
GAATAACTTCTAACCGTAACGCCTTTCTTTTCATAAAAACTAGGTTCTTAGGGTTCATAGCGATACAATAGCCCTAAGAA
TTCTTGATGAGTAATGACCA

Downstream 100 bases:

>100_bases
ATAATTTTTTAATCGAATAATAAGAGCACACGGTTTAATTAACGGTGTGCTTTTTTCGTTTAGTCTCTAGTAAATAGACT
TATCTCGGTAATTCTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MEDTQYVVEWGDTITLSFEGAQIVSAYHTCPEEGDEIELDFGEGWFQGPDDEEYRIEMQLAPFHPYDEDPVRLANITING
EIVKILEITETADGEFFIEPSDGDY

Sequences:

>Translated_105_residues
MEDTQYVVEWGDTITLSFEGAQIVSAYHTCPEEGDEIELDFGEGWFQGPDDEEYRIEMQLAPFHPYDEDPVRLANITING
EIVKILEITETADGEFFIEPSDGDY
>Mature_105_residues
MEDTQYVVEWGDTITLSFEGAQIVSAYHTCPEEGDEIELDFGEGWFQGPDDEEYRIEMQLAPFHPYDEDPVRLANITING
EIVKILEITETADGEFFIEPSDGDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11985; Mature: 11985

Theoretical pI: Translated: 3.41; Mature: 3.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDTQYVVEWGDTITLSFEGAQIVSAYHTCPEEGDEIELDFGEGWFQGPDDEEYRIEMQL
CCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEE
APFHPYDEDPVRLANITINGEIVKILEITETADGEFFIEPSDGDY
ECCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCEEEEECCCCCC
>Mature Secondary Structure
MEDTQYVVEWGDTITLSFEGAQIVSAYHTCPEEGDEIELDFGEGWFQGPDDEEYRIEMQL
CCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEE
APFHPYDEDPVRLANITINGEIVKILEITETADGEFFIEPSDGDY
ECCCCCCCCCEEEEEEEECCCEEEEEEEEECCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA