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The map label for this gene is elbB [H]

Identifier: 209695125

GI number: 209695125

Start: 1730343

End: 1730993

Strand: Reverse

Name: elbB [H]

Synonym: VSAL_I1624

Alternate gene names: 209695125

Gene position: 1730993-1730343 (Counterclockwise)

Preceding gene: 209695135

Following gene: 209695123

Centisome position: 52.06

GC content: 36.87

Gene sequence:

>651_bases
ATGAAAAAAATTGCGGTAATTTTATCTGGTTGTGGAGTGTTTGATGGGTCGGAGATTCATGAGGTAGTACTATCGTTGTT
GGCCATAGAACAAAATGGTGCTGAGTGGGTCTGTTTTGCTCCGAATATTTATCAACATCATGCATTGGAGCATTCAACGG
GTACTGAGCATATAGACTCTCGACATGTTATGGAAGAATCTTCACGTTTATCTCGAGGAGAAATCTCAGATGTTGTTACA
CTTGATGCGAATGATTTCGATGCACTTATTGTCCCTGGTGGTTTTGGGGCGGCCAAAAATCTTTCCAATTTTGCTTTAGA
CTCAGCAATGTTTGAAATTAATTCTCATGTATTAAAAGCCTGTAAATCATTTAAGAAGGCTACAAAACCAACTGGGTTCA
TGTGTATCTCTCCTGTAATGCTACCTGCAATTTATGGAAAGGGGGTTAAATGTACAATTGGTAATGATACTAAAGTCGCC
GATTTTATAGAATCACAAGGAGGTAAACATGTAAATTGTATGACTCAAGATATTATTTGGGATGACATAAATAAAGTAGG
AACAACACCAGCTTATATGACAGCAAAAAACATACTTGAAGTACAGAAAGGGATTTCAAAGTTAATTGAAAAAGTGATAT
CCGAAAGCTGA

Upstream 100 bases:

>100_bases
AAAATGACGGAATTAACTCAATATTTGATACTTAACGTTCACTATTGTGTAGGGGTATAGTTAAAATAATTGTTATATTT
ATACTTAATTGGAAATGGAA

Downstream 100 bases:

>100_bases
TTATCATGAAGATCTGATATAAATTTCTATTATAATCTTATAATTAGTTACAGTGTAGCGTTACTAGTGTTTTTAATATT
AACGACAACCCTATCTAAGT

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MKKIAVILSGCGVFDGSEIHEVVLSLLAIEQNGAEWVCFAPNIYQHHALEHSTGTEHIDSRHVMEESSRLSRGEISDVVT
LDANDFDALIVPGGFGAAKNLSNFALDSAMFEINSHVLKACKSFKKATKPTGFMCISPVMLPAIYGKGVKCTIGNDTKVA
DFIESQGGKHVNCMTQDIIWDDINKVGTTPAYMTAKNILEVQKGISKLIEKVISES

Sequences:

>Translated_216_residues
MKKIAVILSGCGVFDGSEIHEVVLSLLAIEQNGAEWVCFAPNIYQHHALEHSTGTEHIDSRHVMEESSRLSRGEISDVVT
LDANDFDALIVPGGFGAAKNLSNFALDSAMFEINSHVLKACKSFKKATKPTGFMCISPVMLPAIYGKGVKCTIGNDTKVA
DFIESQGGKHVNCMTQDIIWDDINKVGTTPAYMTAKNILEVQKGISKLIEKVISES
>Mature_216_residues
MKKIAVILSGCGVFDGSEIHEVVLSLLAIEQNGAEWVCFAPNIYQHHALEHSTGTEHIDSRHVMEESSRLSRGEISDVVT
LDANDFDALIVPGGFGAAKNLSNFALDSAMFEINSHVLKACKSFKKATKPTGFMCISPVMLPAIYGKGVKCTIGNDTKVA
DFIESQGGKHVNCMTQDIIWDDINKVGTTPAYMTAKNILEVQKGISKLIEKVISES

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=221, Percent_Identity=39.3665158371041, Blast_Score=165, Evalue=3e-41,
Organism=Homo sapiens, GI296531408, Length=221, Percent_Identity=33.9366515837104, Blast_Score=127, Evalue=6e-30,
Organism=Escherichia coli, GI87082228, Length=213, Percent_Identity=50.7042253521127, Blast_Score=226, Evalue=7e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 23430; Mature: 23430

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAVILSGCGVFDGSEIHEVVLSLLAIEQNGAEWVCFAPNIYQHHALEHSTGTEHIDS
CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCHHHHH
RHVMEESSRLSRGEISDVVTLDANDFDALIVPGGFGAAKNLSNFALDSAMFEINSHVLKA
HHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CKSFKKATKPTGFMCISPVMLPAIYGKGVKCTIGNDTKVADFIESQGGKHVNCMTQDIIW
HHHHHHHCCCCCEEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEHHHHHHHH
DDINKVGTTPAYMTAKNILEVQKGISKLIEKVISES
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIAVILSGCGVFDGSEIHEVVLSLLAIEQNGAEWVCFAPNIYQHHALEHSTGTEHIDS
CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCCCCHHHHH
RHVMEESSRLSRGEISDVVTLDANDFDALIVPGGFGAAKNLSNFALDSAMFEINSHVLKA
HHHHHHHHHCCCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
CKSFKKATKPTGFMCISPVMLPAIYGKGVKCTIGNDTKVADFIESQGGKHVNCMTQDIIW
HHHHHHHCCCCCEEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCEEEHHHHHHHH
DDINKVGTTPAYMTAKNILEVQKGISKLIEKVISES
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]