| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209695103
Identifier: 209695103
GI number: 209695103
Start: 1708107
End: 1708508
Strand: Reverse
Name: 209695103
Synonym: VSAL_I1600
Alternate gene names: NA
Gene position: 1708508-1708107 (Counterclockwise)
Preceding gene: 209695106
Following gene: 209695101
Centisome position: 51.38
GC content: 37.06
Gene sequence:
>402_bases ATGATAGTTAAACGTATAATAGTCAGTTTTTTATTTGTTCTTAGTTTATTTTCATCTTTTACATGGGCCAGTAACTCTGA TGTAAAAGGTGCTTTTGATTCACAGCGAAGTGATGTTCAAGTCGAAGGGGTCGGTGAGGTGGTTCGAGTATTGCCTGATG ATAATAAAGGCTCAAGGCATCAAAAGTTCATTCTGCGATTAGATAATAATTTAACGATCCTTATTGCTCATAATATAGAT TTAGCGCCAAGGATTCCAAACCTAAGAAAAGGTGACAGTGTGACCTTTTATGGAGAGTATGAATATTCAAGAAAAGGAGG TGTTGTTCATTGGACTCATCTTGATCCAAGAAATCGTCATACTCATGGATGGTTAAAGCACAATGGGCGTACCTACGAAT AG
Upstream 100 bases:
>100_bases CTAAAGAGTTGATGATCAAACTTATCGATGCGGTATGGGGGTTTCGTTCATAGTGTTAGGTATTTTTTAAATGTGTGGTT TTGTATAGGTAATAGAGTCA
Downstream 100 bases:
>100_bases ATAAGATGAGCCTCTTTTTGTTTGTTAAAAAGAGGCTTGGTTTTTTATTGTGTTGCCGTGCAAGCGTCTATGATTTCCCA AGGGGAGTTTTCAGTTATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MIVKRIIVSFLFVLSLFSSFTWASNSDVKGAFDSQRSDVQVEGVGEVVRVLPDDNKGSRHQKFILRLDNNLTILIAHNID LAPRIPNLRKGDSVTFYGEYEYSRKGGVVHWTHLDPRNRHTHGWLKHNGRTYE
Sequences:
>Translated_133_residues MIVKRIIVSFLFVLSLFSSFTWASNSDVKGAFDSQRSDVQVEGVGEVVRVLPDDNKGSRHQKFILRLDNNLTILIAHNID LAPRIPNLRKGDSVTFYGEYEYSRKGGVVHWTHLDPRNRHTHGWLKHNGRTYE >Mature_133_residues MIVKRIIVSFLFVLSLFSSFTWASNSDVKGAFDSQRSDVQVEGVGEVVRVLPDDNKGSRHQKFILRLDNNLTILIAHNID LAPRIPNLRKGDSVTFYGEYEYSRKGGVVHWTHLDPRNRHTHGWLKHNGRTYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15305; Mature: 15305
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVKRIIVSFLFVLSLFSSFTWASNSDVKGAFDSQRSDVQVEGVGEVVRVLPDDNKGSRH CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCC QKFILRLDNNLTILIAHNIDLAPRIPNLRKGDSVTFYGEYEYSRKGGVVHWTHLDPRNRH EEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCC THGWLKHNGRTYE CCCEEECCCCCCC >Mature Secondary Structure MIVKRIIVSFLFVLSLFSSFTWASNSDVKGAFDSQRSDVQVEGVGEVVRVLPDDNKGSRH CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCC QKFILRLDNNLTILIAHNIDLAPRIPNLRKGDSVTFYGEYEYSRKGGVVHWTHLDPRNRH EEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCC THGWLKHNGRTYE CCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA