Click here to switch to the map view.

The map label for this gene is qnr

Identifier: 209695093

GI number: 209695093

Start: 1699484

End: 1700140

Strand: Reverse

Name: qnr

Synonym: VSAL_I1590

Alternate gene names: NA

Gene position: 1700140-1699484 (Counterclockwise)

Preceding gene: 209695094

Following gene: 209695092

Centisome position: 51.13

GC content: 37.44

Gene sequence:

>657_bases
ATGGCTAAATATAATGAAATATTCGATAACGTGGATTTTTCGAAACAAGATTTAAGAGAATCCTATTTTGAAGGGTGTAA
GTTTTATCGATGTGATTTCAATCGAACCAATCTGAGAGACTCCCGATTTGTTGATTGTGTTTTTATCGAACAGGGGGCAA
TTGAAGGTTGTCATTTTGATTACAGTGACTTAAGGGACGCATCATTTAAACGCTGTCGCTTAACCATGTCTAATTTTAAA
GGCGCAAATTGCTTTGGTGTCGAATTTAGAGAGTGTGATTTAAAAGGAGCTAATTTTGTTCAAGCCAGTTTTGTTAATCA
AATAAGTCATCAAATGTATTTCTGCTCTGCTTATATTACGGGGTGTAATTTGTCTTATGCGAATTTTGAACGCCTATGTA
TCGAGAAATGTGACTTGTTTGAGAACAAATGGAACGGAGCTAATTTACAAGGGGCATCTTTTAAGGGTTCGGACCTTTCT
CGTGGCGCATTCTCTGAAGACTCGTGGGGTCAATTTAGAATGCAAGATGCAAACTTATGTCATTGTGAATTGGATGGTTT
AGATCCCCGTAGAATTGATTTAACCGGTGTTAAGATCTGTGCATGGCAACAAGAGCAATTATTAGAGCCATTAGGATTAG
TGGTACTGCCTGACTAA

Upstream 100 bases:

>100_bases
TTATGGCGATTTTAAGTTGTTGTTTTTTAATGCTTTATATTTATTGGTCTTTACTTCAGATACTGGTAGTCTTCTTTCAT
ACGAATTGGAGAAGTAAAGC

Downstream 100 bases:

>100_bases
AAGGACTATTTGATGGATAATCTGTTTAACAATATACCGAGTGATTTAACGAATGAAGTGTTTACGGATCTCGTCAGTAC
TCATGCTGTCCGTATTGAAA

Product: quinolone resistance determinant QnrC

Products: NA

Alternate protein names: Pentapeptide Repeat Protein; Pentapeptide Repeat Family Protein; Low-Complexity Protein; Quinolone Resistance Determinant QnrC; QnrB6 Protein; Quinolone Resistance Determinant QnrA; Quinolone Resistance Determinant; Quinolone Resistance Gene; Fluoroquinolone Resistance Protein

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAKYNEIFDNVDFSKQDLRESYFEGCKFYRCDFNRTNLRDSRFVDCVFIEQGAIEGCHFDYSDLRDASFKRCRLTMSNFK
GANCFGVEFRECDLKGANFVQASFVNQISHQMYFCSAYITGCNLSYANFERLCIEKCDLFENKWNGANLQGASFKGSDLS
RGAFSEDSWGQFRMQDANLCHCELDGLDPRRIDLTGVKICAWQQEQLLEPLGLVVLPD

Sequences:

>Translated_218_residues
MAKYNEIFDNVDFSKQDLRESYFEGCKFYRCDFNRTNLRDSRFVDCVFIEQGAIEGCHFDYSDLRDASFKRCRLTMSNFK
GANCFGVEFRECDLKGANFVQASFVNQISHQMYFCSAYITGCNLSYANFERLCIEKCDLFENKWNGANLQGASFKGSDLS
RGAFSEDSWGQFRMQDANLCHCELDGLDPRRIDLTGVKICAWQQEQLLEPLGLVVLPD
>Mature_217_residues
AKYNEIFDNVDFSKQDLRESYFEGCKFYRCDFNRTNLRDSRFVDCVFIEQGAIEGCHFDYSDLRDASFKRCRLTMSNFKG
ANCFGVEFRECDLKGANFVQASFVNQISHQMYFCSAYITGCNLSYANFERLCIEKCDLFENKWNGANLQGASFKGSDLSR
GAFSEDSWGQFRMQDANLCHCELDGLDPRRIDLTGVKICAWQQEQLLEPLGLVVLPD

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25126; Mature: 24995

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYNEIFDNVDFSKQDLRESYFEGCKFYRCDFNRTNLRDSRFVDCVFIEQGAIEGCHFD
CCCHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCC
YSDLRDASFKRCRLTMSNFKGANCFGVEFRECDLKGANFVQASFVNQISHQMYFCSAYIT
HHHHHHCCHHHHEEEHHHCCCCCEEECEEEECCCCCCCHHHHHHHHHHHHHEEEEEEEEE
GCNLSYANFERLCIEKCDLFENKWNGANLQGASFKGSDLSRGAFSEDSWGQFRMQDANLC
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEE
HCELDGLDPRRIDLTGVKICAWQQEQLLEPLGLVVLPD
EEEECCCCCCEEEECCEEEEEECHHHHHCCCCEEEECC
>Mature Secondary Structure 
AKYNEIFDNVDFSKQDLRESYFEGCKFYRCDFNRTNLRDSRFVDCVFIEQGAIEGCHFD
CCHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCC
YSDLRDASFKRCRLTMSNFKGANCFGVEFRECDLKGANFVQASFVNQISHQMYFCSAYIT
HHHHHHCCHHHHEEEHHHCCCCCEEECEEEECCCCCCCHHHHHHHHHHHHHEEEEEEEEE
GCNLSYANFERLCIEKCDLFENKWNGANLQGASFKGSDLSRGAFSEDSWGQFRMQDANLC
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEE
HCELDGLDPRRIDLTGVKICAWQQEQLLEPLGLVVLPD
EEEECCCCCCEEEECCEEEEEECHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA