| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is OMT5
Identifier: 209695016
GI number: 209695016
Start: 1611858
End: 1612607
Strand: Reverse
Name: OMT5
Synonym: VSAL_I1508
Alternate gene names: NA
Gene position: 1612607-1611858 (Counterclockwise)
Preceding gene: 209695022
Following gene: 209695011
Centisome position: 48.5
GC content: 36.93
Gene sequence:
>750_bases ATGGAGGTGATTACTATGACAGCAACGATAAAACTATTATCTACAGAGCAAACAAAAGCATTCGATACCGAATATGTAGA CGCGAAAATGTTCACGCTAGTTCAACAAGCGCTTGAGTCTTATAGCATCATAAACAAACCCTTTACTCTTATGGATGTTG GTGGAGGAAATGGTAAATACGCAGACAAATTTCTAAGTTGCTATCCCAATGCACATGTAACGGTGCTTGATTCCGAGTAT TCTTTATTAGAAAAAAACACATCGAATCAACGGAAGAATTTAATCCATGCCCCTTTTCAAAATGTTTCTGACATCCCAAA AATGCAAGTAATTCAATTTAATTGGGTATTACATCATTTTGTTAGTAGCGGGTATAAAGAAAGTTGTGCATTGCAACTCT CTGGTCTAAAAGATGCATATGAACTTCTTGAGCCTGGGGGCGTAATTTTAATCTTTGAAAATTTTTATGACGGGTGGCCG ATGAAAGAACTACCAAGTAACATCATTCATCAGTTAACAGCATCAACCTCACTAGCGGCCATTACATCAAAAATGGGAGC CAATACCGCAGGCGTTGGGGTTTGTTTTCATTCAGAAAAATATTGGCGTAACTTACTTAGCACGGCCGGCTTTAATCAAA TAAAATCAAAGCATTGCTATGATTTTGGTAATTTATCCACGCTTAAAAAGATATGTTTATGCATCAATGAACAACGAGTT GGGCTTCTTATCGCACAAAAACCAATATAA
Upstream 100 bases:
>100_bases ATGCTTATCAAATAAATAAGCTTCTAAATTCCAATTTAACCTATTGATATATAATGATTATTTACCATTTAAATTATGGT CTAGTTTTTGCTCATATCTA
Downstream 100 bases:
>100_bases TATTCAGATAAGCGTTACTTGATTAAGATAAAGTAGCGCTTATCGATATGAGTTTCTTCATAGAGGACAACCTCTTTTTT CTCTATGACGTGAAGTCATA
Product: methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MEVITMTATIKLLSTEQTKAFDTEYVDAKMFTLVQQALESYSIINKPFTLMDVGGGNGKYADKFLSCYPNAHVTVLDSEY SLLEKNTSNQRKNLIHAPFQNVSDIPKMQVIQFNWVLHHFVSSGYKESCALQLSGLKDAYELLEPGGVILIFENFYDGWP MKELPSNIIHQLTASTSLAAITSKMGANTAGVGVCFHSEKYWRNLLSTAGFNQIKSKHCYDFGNLSTLKKICLCINEQRV GLLIAQKPI
Sequences:
>Translated_249_residues MEVITMTATIKLLSTEQTKAFDTEYVDAKMFTLVQQALESYSIINKPFTLMDVGGGNGKYADKFLSCYPNAHVTVLDSEY SLLEKNTSNQRKNLIHAPFQNVSDIPKMQVIQFNWVLHHFVSSGYKESCALQLSGLKDAYELLEPGGVILIFENFYDGWP MKELPSNIIHQLTASTSLAAITSKMGANTAGVGVCFHSEKYWRNLLSTAGFNQIKSKHCYDFGNLSTLKKICLCINEQRV GLLIAQKPI >Mature_249_residues MEVITMTATIKLLSTEQTKAFDTEYVDAKMFTLVQQALESYSIINKPFTLMDVGGGNGKYADKFLSCYPNAHVTVLDSEY SLLEKNTSNQRKNLIHAPFQNVSDIPKMQVIQFNWVLHHFVSSGYKESCALQLSGLKDAYELLEPGGVILIFENFYDGWP MKELPSNIIHQLTASTSLAAITSKMGANTAGVGVCFHSEKYWRNLLSTAGFNQIKSKHCYDFGNLSTLKKICLCINEQRV GLLIAQKPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27835; Mature: 27835
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVITMTATIKLLSTEQTKAFDTEYVDAKMFTLVQQALESYSIINKPFTLMDVGGGNGKY CEEEEEEEEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH ADKFLSCYPNAHVTVLDSEYSLLEKNTSNQRKNLIHAPFQNVSDIPKMQVIQFNWVLHHF HHHHHHHCCCCEEEEEECCHHHHHCCCCHHHHHEECCCCCCCCCCCCEEEEEHHHHHHHH VSSGYKESCALQLSGLKDAYELLEPGGVILIFENFYDGWPMKELPSNIIHQLTASTSLAA HHCCCCHHHEEEECCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHH ITSKMGANTAGVGVCFHSEKYWRNLLSTAGFNQIKSKHCYDFGNLSTLKKICLCINEQRV HHHHHCCCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE GLLIAQKPI EEEEECCCC >Mature Secondary Structure MEVITMTATIKLLSTEQTKAFDTEYVDAKMFTLVQQALESYSIINKPFTLMDVGGGNGKY CEEEEEEEEEEEEECCCCHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH ADKFLSCYPNAHVTVLDSEYSLLEKNTSNQRKNLIHAPFQNVSDIPKMQVIQFNWVLHHF HHHHHHHCCCCEEEEEECCHHHHHCCCCHHHHHEECCCCCCCCCCCCEEEEEHHHHHHHH VSSGYKESCALQLSGLKDAYELLEPGGVILIFENFYDGWPMKELPSNIIHQLTASTSLAA HHCCCCHHHEEEECCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHH ITSKMGANTAGVGVCFHSEKYWRNLLSTAGFNQIKSKHCYDFGNLSTLKKICLCINEQRV HHHHHCCCCCCEEEEEECHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCE GLLIAQKPI EEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA