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The map label for this gene is fdhD [H]

Identifier: 209694965

GI number: 209694965

Start: 1565543

End: 1566394

Strand: Reverse

Name: fdhD [H]

Synonym: VSAL_I1448

Alternate gene names: 209694965

Gene position: 1566394-1565543 (Counterclockwise)

Preceding gene: 209694977

Following gene: 209694962

Centisome position: 47.11

GC content: 44.37

Gene sequence:

>852_bases
TTGGAGCCTACTTTGAGCCAATCACCAAAAATAATAACTACTGGCGCTGTGCCTAAACAAACTCTTACTGTGGATGTTTA
TGATGAATACGGTGAGAAGCTTAGCAAAGAAGTGGCGTGCGAACAGCCATTAACCCTAATGCTGAACTGGCAAGAAGTTG
TGACATTAATGACGTTAGGCGCTCGCCCTGCCGAGTTGGTATTGGGGTATTTAAAAAACCAACATTTCATCTCTGATGTG
TCGCTTTTAGAGTCGGTATTGATCGATTGGGAAACCAAAACAGCCGCGGTAAATACCAAAGAAACCACCGAACACGTCAA
AGAGAATTTAAAGAAGAAGACCGTCACCTCTGGCTGTGGCCAAGGCACCATGTATGGCAACGTGATGAAGCAACTTGAGA
ATTACCAAGTGCCTCAAGTAACCATCAATCAATCGGATATTTACGCGTCTTTAGAAGCCCTGACTTATCACAATGATACG
TATAAAGCCGCTGGTGCTGTGCATGGCTGTGCGATTTGTGAAAACAACCAAGTCTCGTCTTTTGTGGAGGATGTAGGTCG
TCATAATGCGGTTGATACCCTTGCGGGTGAGTTATGGTTAAACCGTGGTACGGGTGACAACAAGCTGTTTTATACAACAG
GTCGTTTAACTTCTGAGATGGTAATTAAAGTCGCTCAAATGGGGATCCCTGTTTTACTTTCTCGTTCAGGCGTAACGCAA
ATGGGCTTAGATTTAGCGCAGAAATTTGGCATTACGATTATTGCTCGCGCAAAAGGTAAGCGTTTCCAAGTGTTTGCTGG
GCATGAAAAAATCAACTTTGATGTCAAGGGTGAAGCGGCGCTTAGGGACTAG

Upstream 100 bases:

>100_bases
TGATATAAAGCAATCCTTATACCAACAGCGCTTTCTTTTTGATTTATCTCTATGGTATAAAATTTGCGTGTATATCGTAA
ATTACCTTAAATTCATTTAA

Downstream 100 bases:

>100_bases
TATTGAGGGGCTAAGCTCTAGGAAAAGTAAGGACGAGTAAGGACGACAATCTCTTACTCGTCCCTAAAAAATAAGCACTC
ACACTCTATTTAAGAGGTAT

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MEPTLSQSPKIITTGAVPKQTLTVDVYDEYGEKLSKEVACEQPLTLMLNWQEVVTLMTLGARPAELVLGYLKNQHFISDV
SLLESVLIDWETKTAAVNTKETTEHVKENLKKKTVTSGCGQGTMYGNVMKQLENYQVPQVTINQSDIYASLEALTYHNDT
YKAAGAVHGCAICENNQVSSFVEDVGRHNAVDTLAGELWLNRGTGDNKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQ
MGLDLAQKFGITIIARAKGKRFQVFAGHEKINFDVKGEAALRD

Sequences:

>Translated_283_residues
MEPTLSQSPKIITTGAVPKQTLTVDVYDEYGEKLSKEVACEQPLTLMLNWQEVVTLMTLGARPAELVLGYLKNQHFISDV
SLLESVLIDWETKTAAVNTKETTEHVKENLKKKTVTSGCGQGTMYGNVMKQLENYQVPQVTINQSDIYASLEALTYHNDT
YKAAGAVHGCAICENNQVSSFVEDVGRHNAVDTLAGELWLNRGTGDNKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQ
MGLDLAQKFGITIIARAKGKRFQVFAGHEKINFDVKGEAALRD
>Mature_283_residues
MEPTLSQSPKIITTGAVPKQTLTVDVYDEYGEKLSKEVACEQPLTLMLNWQEVVTLMTLGARPAELVLGYLKNQHFISDV
SLLESVLIDWETKTAAVNTKETTEHVKENLKKKTVTSGCGQGTMYGNVMKQLENYQVPQVTINQSDIYASLEALTYHNDT
YKAAGAVHGCAICENNQVSSFVEDVGRHNAVDTLAGELWLNRGTGDNKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQ
MGLDLAQKFGITIIARAKGKRFQVFAGHEKINFDVKGEAALRD

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 31149; Mature: 31149

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPTLSQSPKIITTGAVPKQTLTVDVYDEYGEKLSKEVACEQPLTLMLNWQEVVTLMTLG
CCCCCCCCCCEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCC
ARPAELVLGYLKNQHFISDVSLLESVLIDWETKTAAVNTKETTEHVKENLKKKTVTSGCG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
QGTMYGNVMKQLENYQVPQVTINQSDIYASLEALTYHNDTYKAAGAVHGCAICENNQVSS
CCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHEEECCCHHHCCCHHEEEEECCCCHHH
FVEDVGRHNAVDTLAGELWLNRGTGDNKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQ
HHHHHHCCCHHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCCHH
MGLDLAQKFGITIIARAKGKRFQVFAGHEKINFDVKGEAALRD
HHHHHHHHCCEEEEEECCCCEEEEEECCEEEEEEECCCCCCCC
>Mature Secondary Structure
MEPTLSQSPKIITTGAVPKQTLTVDVYDEYGEKLSKEVACEQPLTLMLNWQEVVTLMTLG
CCCCCCCCCCEEEECCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCC
ARPAELVLGYLKNQHFISDVSLLESVLIDWETKTAAVNTKETTEHVKENLKKKTVTSGCG
CCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
QGTMYGNVMKQLENYQVPQVTINQSDIYASLEALTYHNDTYKAAGAVHGCAICENNQVSS
CCCHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHEEECCCHHHCCCHHEEEEECCCCHHH
FVEDVGRHNAVDTLAGELWLNRGTGDNKLFYTTGRLTSEMVIKVAQMGIPVLLSRSGVTQ
HHHHHHCCCHHHHHHHHHEEECCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCCHH
MGLDLAQKFGITIIARAKGKRFQVFAGHEKINFDVKGEAALRD
HHHHHHHHCCEEEEEECCCCEEEEEECCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA