| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694779
Identifier: 209694779
GI number: 209694779
Start: 1346513
End: 1346605
Strand: Direct
Name: 209694779
Synonym: VSAL_I1235
Alternate gene names: NA
Gene position: 1346513-1346605 (Clockwise)
Preceding gene: 209694778
Following gene: 209694780
Centisome position: 40.49
GC content: 32.26
Gene sequence:
>93_bases ATGAAAAATGAAACGATGATTGAAGGTATGGAACATTTATTTACAACAATGAAGGTGCCTTTTAATGGAGTAGAAGAACC TGATTCAAGGTAA
Upstream 100 bases:
>100_bases AATAAGGAGTCATAACAATTAACAATACGCGGACAAATAAACACTAGACCGACTGGTTTGTATTGTATATTCTGTAGCCA ATCTAATAACGAGGTGTTTT
Downstream 100 bases:
>100_bases TCATCATGAACACGAATGATTCGTTACTTTTTACACGAAAAAGCAGTGATGACGAACGGTGAAGAGCACCAAATAAAACC TCTGTTTTCTGTCAAAGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 30; Mature: 30
Protein sequence:
>30_residues MKNETMIEGMEHLFTTMKVPFNGVEEPDSR
Sequences:
>Translated_30_residues MKNETMIEGMEHLFTTMKVPFNGVEEPDSR >Mature_30_residues MKNETMIEGMEHLFTTMKVPFNGVEEPDSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3499; Mature: 3499
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 13.3 %Met (Translated Protein) 13.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 13.3 %Met (Mature Protein) 13.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNETMIEGMEHLFTTMKVPFNGVEEPDSR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKNETMIEGMEHLFTTMKVPFNGVEEPDSR CCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA