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The map label for this gene is vasJ-1

Identifier: 209694716

GI number: 209694716

Start: 1272880

End: 1274265

Strand: Direct

Name: vasJ-1

Synonym: VSAL_I1169

Alternate gene names: NA

Gene position: 1272880-1274265 (Clockwise)

Preceding gene: 209694715

Following gene: 209694717

Centisome position: 38.28

GC content: 36.87

Gene sequence:

>1386_bases
ATGAGGTTTACACAAAAAAATATTTTAGAGTTTCAAACTCCTATTGCCGAGGATTTGATTTGCGGAGTTTATTTAAAATT
AGATAAAGGGGCATTTCGTCCTCTGCGTAATGAGTTTAATGTCGCTCAAACATCTTTACGTAAACTTAGCCAGAACCCAA
GCAGCCAAGAGTTGGAATCTTTACAAGATGAGAATTATGAAAATTGGCAAGTGTTATCTACTAGCTTAATGACTACTTTT
GAAAATGTGACGAGAGATATTGAGTTAATTGGGTGGTTTATTACTTCTCAAATTTTACTTGATAACTCACTTAGCAGCGT
TGCATATTCAATGAATTGGTTTGCTGAGTTATTGGCAGAACAATGGGATTCCATTAATCCTGTATTGCCTGAAGAAAAGT
TAAAAGGTGATTCGGATACAGGACGTTTAGTTGAGCAATACGGCGCGAAAGTGAAAGCGTTTTTTCAGTTACTCGGCGAT
AGTGAGGAAAGCAGTTTATTGTATACACCTTTGTTACTGCTGCCGCTTGTTGGTCACGTTACATTTTATGATTTTCAAAG
TGCAGAGCGTAAAGGCGAATTAAGCCAACTCGAACAACAGGCGACATCATTAATTACTTTTGATCGTAATGGTGTTCGAC
AACGATTAGAAAGTGTGGCCGATTGTCTTTTTCAAATTGAACGTTTAATCACTATTACTAAAACGTATGCTCAAATCGCA
GGTGTTAACGCTCCGAACTTTAATTTTGTGAAAACGTTGTTTACTAAATATAACAATGCATTGCAGCAGTTATCGGGAAT
GAAAGCTGAAGTTAAAGTGACGAGTACAAGTCATAAAGAAAAGCAACGTTTAATTAACCAATCGGTAAATACTGAGACTT
GTGGAGAAAATGTTCTATTAGTAGAAGCTGTTTCTCAAGCGAGTGATTCATCTATACCGCTGAGACTAACAGCAGATAAC
CTCTCGCAAGTAGGTTTAGCAAATAGTATGAATCGTGATTTAGCTTTTCATTTACTTCGAGAAGTATCTAGTTATTTCCG
TCAGAGTGAGCCACATAGCCCTGTTTCTTTTTTACTAGAAAAAGCGATTCGTTGGGGGTACTTATCTCTACCTGAGCTAT
TACAAGAAATGATGGTTGAACAGGATGGAGATAATGTTAATAAGATTTTTAATGCATCAGGATTAAACCACTCTGAACAG
ATTCTTCTGCCAGAAGTCGGTATACCTCCTTGTGTCATTGAAAAGACTTTAACGTTTACTGAGAGTTCTTCTTTTTCAGA
GCCTGTAAACATTGAAGCTAAAGTAGCTCAAGTATCTATTAATGATACTGAACTAAAACAAAATGAAGATGAGTCATCTT
CGAGGCCTACAGCGCTTCGTTGGTGA

Upstream 100 bases:

>100_bases
TTGTAATATTTTCGATTGTACGTTAACAAACTTATAAGTTTATTATATTTATAATGAGATCTTATTCATCGAATTTACTG
ATGTATTGTTTGGAGGATAA

Downstream 100 bases:

>100_bases
ATATATTATGAACTTAAGATAAGGAACGAAAAAATGGCTAGTATTTACATGCGTATTGAGAGTGTTGATGTTAAAGGTGG
CGCTACAGTTGAAGGTCTAG

Product: type VI secretion protein VasJ-1

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MRFTQKNILEFQTPIAEDLICGVYLKLDKGAFRPLRNEFNVAQTSLRKLSQNPSSQELESLQDENYENWQVLSTSLMTTF
ENVTRDIELIGWFITSQILLDNSLSSVAYSMNWFAELLAEQWDSINPVLPEEKLKGDSDTGRLVEQYGAKVKAFFQLLGD
SEESSLLYTPLLLLPLVGHVTFYDFQSAERKGELSQLEQQATSLITFDRNGVRQRLESVADCLFQIERLITITKTYAQIA
GVNAPNFNFVKTLFTKYNNALQQLSGMKAEVKVTSTSHKEKQRLINQSVNTETCGENVLLVEAVSQASDSSIPLRLTADN
LSQVGLANSMNRDLAFHLLREVSSYFRQSEPHSPVSFLLEKAIRWGYLSLPELLQEMMVEQDGDNVNKIFNASGLNHSEQ
ILLPEVGIPPCVIEKTLTFTESSSFSEPVNIEAKVAQVSINDTELKQNEDESSSRPTALRW

Sequences:

>Translated_461_residues
MRFTQKNILEFQTPIAEDLICGVYLKLDKGAFRPLRNEFNVAQTSLRKLSQNPSSQELESLQDENYENWQVLSTSLMTTF
ENVTRDIELIGWFITSQILLDNSLSSVAYSMNWFAELLAEQWDSINPVLPEEKLKGDSDTGRLVEQYGAKVKAFFQLLGD
SEESSLLYTPLLLLPLVGHVTFYDFQSAERKGELSQLEQQATSLITFDRNGVRQRLESVADCLFQIERLITITKTYAQIA
GVNAPNFNFVKTLFTKYNNALQQLSGMKAEVKVTSTSHKEKQRLINQSVNTETCGENVLLVEAVSQASDSSIPLRLTADN
LSQVGLANSMNRDLAFHLLREVSSYFRQSEPHSPVSFLLEKAIRWGYLSLPELLQEMMVEQDGDNVNKIFNASGLNHSEQ
ILLPEVGIPPCVIEKTLTFTESSSFSEPVNIEAKVAQVSINDTELKQNEDESSSRPTALRW
>Mature_461_residues
MRFTQKNILEFQTPIAEDLICGVYLKLDKGAFRPLRNEFNVAQTSLRKLSQNPSSQELESLQDENYENWQVLSTSLMTTF
ENVTRDIELIGWFITSQILLDNSLSSVAYSMNWFAELLAEQWDSINPVLPEEKLKGDSDTGRLVEQYGAKVKAFFQLLGD
SEESSLLYTPLLLLPLVGHVTFYDFQSAERKGELSQLEQQATSLITFDRNGVRQRLESVADCLFQIERLITITKTYAQIA
GVNAPNFNFVKTLFTKYNNALQQLSGMKAEVKVTSTSHKEKQRLINQSVNTETCGENVLLVEAVSQASDSSIPLRLTADN
LSQVGLANSMNRDLAFHLLREVSSYFRQSEPHSPVSFLLEKAIRWGYLSLPELLQEMMVEQDGDNVNKIFNASGLNHSEQ
ILLPEVGIPPCVIEKTLTFTESSSFSEPVNIEAKVAQVSINDTELKQNEDESSSRPTALRW

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52017; Mature: 52017

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTQKNILEFQTPIAEDLICGVYLKLDKGAFRPLRNEFNVAQTSLRKLSQNPSSQELES
CCCCHHHHHHHHCCHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQDENYENWQVLSTSLMTTFENVTRDIELIGWFITSQILLDNSLSSVAYSMNWFAELLAE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QWDSINPVLPEEKLKGDSDTGRLVEQYGAKVKAFFQLLGDSEESSLLYTPLLLLPLVGHV
HHCCCCCCCCHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TFYDFQSAERKGELSQLEQQATSLITFDRNGVRQRLESVADCLFQIERLITITKTYAQIA
HHHCCHHHHHCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVNAPNFNFVKTLFTKYNNALQQLSGMKAEVKVTSTSHKEKQRLINQSVNTETCGENVLL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCEEE
VEAVSQASDSSIPLRLTADNLSQVGLANSMNRDLAFHLLREVSSYFRQSEPHSPVSFLLE
EEEHHHCCCCCCEEEEECCCHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KAIRWGYLSLPELLQEMMVEQDGDNVNKIFNASGLNHSEQILLPEVGIPPCVIEKTLTFT
HHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHEEE
ESSSFSEPVNIEAKVAQVSINDTELKQNEDESSSRPTALRW
CCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFTQKNILEFQTPIAEDLICGVYLKLDKGAFRPLRNEFNVAQTSLRKLSQNPSSQELES
CCCCHHHHHHHHCCHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LQDENYENWQVLSTSLMTTFENVTRDIELIGWFITSQILLDNSLSSVAYSMNWFAELLAE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
QWDSINPVLPEEKLKGDSDTGRLVEQYGAKVKAFFQLLGDSEESSLLYTPLLLLPLVGHV
HHCCCCCCCCHHHCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
TFYDFQSAERKGELSQLEQQATSLITFDRNGVRQRLESVADCLFQIERLITITKTYAQIA
HHHCCHHHHHCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVNAPNFNFVKTLFTKYNNALQQLSGMKAEVKVTSTSHKEKQRLINQSVNTETCGENVLL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCEEE
VEAVSQASDSSIPLRLTADNLSQVGLANSMNRDLAFHLLREVSSYFRQSEPHSPVSFLLE
EEEHHHCCCCCCEEEEECCCHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KAIRWGYLSLPELLQEMMVEQDGDNVNKIFNASGLNHSEQILLPEVGIPPCVIEKTLTFT
HHHHCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHHEEE
ESSSFSEPVNIEAKVAQVSINDTELKQNEDESSSRPTALRW
CCCCCCCCCCCEEEEEEEECCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA