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The map label for this gene is vasA

Identifier: 209694672

GI number: 209694672

Start: 1222512

End: 1224263

Strand: Reverse

Name: vasA

Synonym: VSAL_I1121

Alternate gene names: NA

Gene position: 1224263-1222512 (Counterclockwise)

Preceding gene: 209694673

Following gene: 209694671

Centisome position: 36.82

GC content: 37.39

Gene sequence:

>1752_bases
ATGAGTTTTAATACCTATTATCAAACAGAATTAGCGGCATTGAGAGAGCTTGGAAAATCATTTTCAGAAGAAAATCCCGC
CTTAGCCCCTTTTCTTGGACAAGAAGGGTTAGATCCTGATATTGAACGCTTATTTGAAGGTTTCGCTTTCTTAGTCGGTC
GATTACATCAACGTCTTGATAATCAATTACCTGAGTTAACACATTCATTAATGCGATTACTTTGGCCTAACTATGTTCAA
GCAATTCCCGCAATGAGTACATTGAAATTTACACCGAATGCAGAAGCGACTCAATGCTCAACTATCCCCCGAGGGACTAA
AGTGAAAAGTCAGTTAATTGATGGGGTTCATTGTCAGTTCAAAACCTGCTATGACGTTGAGTTGTATCCAATTAGTTTAC
ATTCATCTTCCTTTACCGCGAATGGAAATGGCGGGATCTATCAACTACGATTAGAATTACCGACAGGCGTTGAATTACAT
TCTTTAAATATGAATAAATTAAAAATTCATTTTAATGGGGATAAAGCCAGTAGTCTTTCATTAATCATGGCACTTTGCTC
ATCCACTACTCAAGCCGAATTTTGTGCATTAAATAGCGATAATGAGTTAATTAATCGGTCTACCTTTCCAACCAAGAGTA
TCAAATCCGTTGGTTTTTCATCGCAAGAAGCATTATACGATTATCCATTAAACACATTTGAAGGATACCGTCATATTCAA
GAATTCTTTTGCTATCCAGAAAAATATTACTACATTGACTTAACTGAACTTCCTGTATGGCCAGCTCAGTTTAGTCAAGG
ATGTAAGTTCATCGATATCAAATTTACCTTAGCTCACATTACTCAACAGCCTTTTTATGCTACTCGAATACAACCGGCTC
TTTTTTGCACACCCATTGTCAATTTATTCACAACGGATACTCAACCGATTTTATTAAGTCATAGAAAAGATCAATATAAA
GTAACCCCATCCTCTTTAAGTGACAGCAGCAGTACTATTTTATCCGTTGAAGAAGTGCATGGATGGACCCCGGGACAAAA
AGGTCGCATTAATTTCTATCATTTTGAATCTTTTGAACATAACGATACAAATAAACACGCCAACTATTACAGCATCAAAC
AAGAAAAAAACATTGTCAATGGTCACTTTGATACATACTTATCTTTTCGTTCATTAAATACATTTTCAAATAACATTACG
GTATCGATTAGCGTTACCGCATGCAATGGACAACTTGCACAACGCTTATCCGTCGGCAGTATTACTCATGCAACGGAACA
GACAACAGGATCCGCTACCTTTTCAAATATTCGCGCAGTCACGCCTTGTTATACTCCGCCGATTGAAAAGGATGGGCTCT
GGTCTTTGATCTCCAATATGTCTCTCAATTACCTCTCATTAACAAAGCCAGAAGCATTTAAACGCATTTTACTTGCCTAT
GATTTTGCAGGACAACAGGACGACTCTAGAAGAAAAAAACATCGTCGATTAATTGATGGTATCAAACACATCACAACAAA
ACCTTCCGATATGCTTTATGAAGGTGCGCCTGTTCGAGCAATGAATACCCAATTATCACTTAACAGTAAGCACTTTTTAT
GCGAAGGCGAACTCTACTTGTTTTCATCCGTAATTAATGAATTTTTATCGCTATACACCAGCATGAACTCATTCAATCAA
CTCAATGTGACAAGTACTTATGGAGGCGACTATTCATGGCAACCACGAATGGGGCAACAACCTCTAATTTAA

Upstream 100 bases:

>100_bases
GTGATATTTTATTAAATAACCAACTAACGCCTATTTCTTTTAATACTTACGCTCAAAAAGTTAACACTAAGCCTTATAAC
TATGAAATTCAAGGCCTGGC

Downstream 100 bases:

>100_bases
GTCCAATATCAAAAAATAAAGCGATTGATATAAAGATAGAATACATTGGACAACTGTCACTAATGAAAGCCTTAGATCAC
GTTTGTCATCAACTTATTCA

Product: type VI secretion protein VasA

Products: NA

Alternate protein names: Type VI Secretion Protein Family; T6ss C; Type VI Secretion System; LOW QUALITY PROTEIN Type VI Secretion Protein; Type VI Secretion System Protein EvpF; Type VI Secretion System Protein; Type VI Secretion Protein VasA; Type VI Secretion; Type VI Secretion System Core Protein; Protein ImpG; Cytoplasmic Protein SciC; Type VI Secretion System Protein ImpG; Conserved Protein; Protein ImpG/VasA

Number of amino acids: Translated: 583; Mature: 582

Protein sequence:

>583_residues
MSFNTYYQTELAALRELGKSFSEENPALAPFLGQEGLDPDIERLFEGFAFLVGRLHQRLDNQLPELTHSLMRLLWPNYVQ
AIPAMSTLKFTPNAEATQCSTIPRGTKVKSQLIDGVHCQFKTCYDVELYPISLHSSSFTANGNGGIYQLRLELPTGVELH
SLNMNKLKIHFNGDKASSLSLIMALCSSTTQAEFCALNSDNELINRSTFPTKSIKSVGFSSQEALYDYPLNTFEGYRHIQ
EFFCYPEKYYYIDLTELPVWPAQFSQGCKFIDIKFTLAHITQQPFYATRIQPALFCTPIVNLFTTDTQPILLSHRKDQYK
VTPSSLSDSSSTILSVEEVHGWTPGQKGRINFYHFESFEHNDTNKHANYYSIKQEKNIVNGHFDTYLSFRSLNTFSNNIT
VSISVTACNGQLAQRLSVGSITHATEQTTGSATFSNIRAVTPCYTPPIEKDGLWSLISNMSLNYLSLTKPEAFKRILLAY
DFAGQQDDSRRKKHRRLIDGIKHITTKPSDMLYEGAPVRAMNTQLSLNSKHFLCEGELYLFSSVINEFLSLYTSMNSFNQ
LNVTSTYGGDYSWQPRMGQQPLI

Sequences:

>Translated_583_residues
MSFNTYYQTELAALRELGKSFSEENPALAPFLGQEGLDPDIERLFEGFAFLVGRLHQRLDNQLPELTHSLMRLLWPNYVQ
AIPAMSTLKFTPNAEATQCSTIPRGTKVKSQLIDGVHCQFKTCYDVELYPISLHSSSFTANGNGGIYQLRLELPTGVELH
SLNMNKLKIHFNGDKASSLSLIMALCSSTTQAEFCALNSDNELINRSTFPTKSIKSVGFSSQEALYDYPLNTFEGYRHIQ
EFFCYPEKYYYIDLTELPVWPAQFSQGCKFIDIKFTLAHITQQPFYATRIQPALFCTPIVNLFTTDTQPILLSHRKDQYK
VTPSSLSDSSSTILSVEEVHGWTPGQKGRINFYHFESFEHNDTNKHANYYSIKQEKNIVNGHFDTYLSFRSLNTFSNNIT
VSISVTACNGQLAQRLSVGSITHATEQTTGSATFSNIRAVTPCYTPPIEKDGLWSLISNMSLNYLSLTKPEAFKRILLAY
DFAGQQDDSRRKKHRRLIDGIKHITTKPSDMLYEGAPVRAMNTQLSLNSKHFLCEGELYLFSSVINEFLSLYTSMNSFNQ
LNVTSTYGGDYSWQPRMGQQPLI
>Mature_582_residues
SFNTYYQTELAALRELGKSFSEENPALAPFLGQEGLDPDIERLFEGFAFLVGRLHQRLDNQLPELTHSLMRLLWPNYVQA
IPAMSTLKFTPNAEATQCSTIPRGTKVKSQLIDGVHCQFKTCYDVELYPISLHSSSFTANGNGGIYQLRLELPTGVELHS
LNMNKLKIHFNGDKASSLSLIMALCSSTTQAEFCALNSDNELINRSTFPTKSIKSVGFSSQEALYDYPLNTFEGYRHIQE
FFCYPEKYYYIDLTELPVWPAQFSQGCKFIDIKFTLAHITQQPFYATRIQPALFCTPIVNLFTTDTQPILLSHRKDQYKV
TPSSLSDSSSTILSVEEVHGWTPGQKGRINFYHFESFEHNDTNKHANYYSIKQEKNIVNGHFDTYLSFRSLNTFSNNITV
SISVTACNGQLAQRLSVGSITHATEQTTGSATFSNIRAVTPCYTPPIEKDGLWSLISNMSLNYLSLTKPEAFKRILLAYD
FAGQQDDSRRKKHRRLIDGIKHITTKPSDMLYEGAPVRAMNTQLSLNSKHFLCEGELYLFSSVINEFLSLYTSMNSFNQL
NVTSTYGGDYSWQPRMGQQPLI

Specific function: Unknown

COG id: COG3519

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66025; Mature: 65894

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNTYYQTELAALRELGKSFSEENPALAPFLGQEGLDPDIERLFEGFAFLVGRLHQRLD
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NQLPELTHSLMRLLWPNYVQAIPAMSTLKFTPNAEATQCSTIPRGTKVKSQLIDGVHCQF
HHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEE
KTCYDVELYPISLHSSSFTANGNGGIYQLRLELPTGVELHSLNMNKLKIHFNGDKASSLS
EEEEEEEEEEEEEECCCEEECCCCCEEEEEEECCCCCEEEECCCEEEEEEECCCCCHHHH
LIMALCSSTTQAEFCALNSDNELINRSTFPTKSIKSVGFSSQEALYDYPLNTFEGYRHIQ
HHHHHHCCCCCCEEEEECCCCHHHCCCCCCCHHHHHCCCCCCCHHEECCCHHHHHHHHHH
EFFCYPEKYYYIDLTELPVWPAQFSQGCKFIDIKFTLAHITQQPFYATRIQPALFCTPIV
HHHCCCCEEEEEEEECCCCCHHHHHCCCEEEEEEEEEEHHCCCCCCHHCCCCHHHHHHHH
NLFTTDTQPILLSHRKDQYKVTPSSLSDSSSTILSVEEVHGWTPGQKGRINFYHFESFEH
HHHCCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEEECCCCC
NDTNKHANYYSIKQEKNIVNGHFDTYLSFRSLNTFSNNITVSISVTACNGQLAQRLSVGS
CCCCCCCCEEEEHHCCCCCCCCHHHHEEEHHHCCCCCCEEEEEEEEECCCHHHHHHCCCC
ITHATEQTTGSATFSNIRAVTPCYTPPIEKDGLWSLISNMSLNYLSLTKPEAFKRILLAY
CCCCCCCCCCCCHHHCCEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHE
DFAGQQDDSRRKKHRRLIDGIKHITTKPSDMLYEGAPVRAMNTQLSLNSKHFLCEGELYL
ECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCCEEECCEEEECCCEEEECCHHHH
FSSVINEFLSLYTSMNSFNQLNVTSTYGGDYSWQPRMGQQPLI
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SFNTYYQTELAALRELGKSFSEENPALAPFLGQEGLDPDIERLFEGFAFLVGRLHQRLD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NQLPELTHSLMRLLWPNYVQAIPAMSTLKFTPNAEATQCSTIPRGTKVKSQLIDGVHCQF
HHHHHHHHHHHHHHCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCEEE
KTCYDVELYPISLHSSSFTANGNGGIYQLRLELPTGVELHSLNMNKLKIHFNGDKASSLS
EEEEEEEEEEEEEECCCEEECCCCCEEEEEEECCCCCEEEECCCEEEEEEECCCCCHHHH
LIMALCSSTTQAEFCALNSDNELINRSTFPTKSIKSVGFSSQEALYDYPLNTFEGYRHIQ
HHHHHHCCCCCCEEEEECCCCHHHCCCCCCCHHHHHCCCCCCCHHEECCCHHHHHHHHHH
EFFCYPEKYYYIDLTELPVWPAQFSQGCKFIDIKFTLAHITQQPFYATRIQPALFCTPIV
HHHCCCCEEEEEEEECCCCCHHHHHCCCEEEEEEEEEEHHCCCCCCHHCCCCHHHHHHHH
NLFTTDTQPILLSHRKDQYKVTPSSLSDSSSTILSVEEVHGWTPGQKGRINFYHFESFEH
HHHCCCCCCEEEECCCCCEEECCCCCCCCCCEEEEEHHHCCCCCCCCCCEEEEEECCCCC
NDTNKHANYYSIKQEKNIVNGHFDTYLSFRSLNTFSNNITVSISVTACNGQLAQRLSVGS
CCCCCCCCEEEEHHCCCCCCCCHHHHEEEHHHCCCCCCEEEEEEEEECCCHHHHHHCCCC
ITHATEQTTGSATFSNIRAVTPCYTPPIEKDGLWSLISNMSLNYLSLTKPEAFKRILLAY
CCCCCCCCCCCCHHHCCEEECCCCCCCCCCCHHHHHHHCCCCCEEECCCHHHHHHHHHHE
DFAGQQDDSRRKKHRRLIDGIKHITTKPSDMLYEGAPVRAMNTQLSLNSKHFLCEGELYL
ECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEECCCCCEEECCEEEECCCEEEECCHHHH
FSSVINEFLSLYTSMNSFNQLNVTSTYGGDYSWQPRMGQQPLI
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA