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The map label for this gene is recR

Identifier: 209694646

GI number: 209694646

Start: 1182772

End: 1183374

Strand: Direct

Name: recR

Synonym: VSAL_I1087

Alternate gene names: 209694646

Gene position: 1182772-1183374 (Clockwise)

Preceding gene: 209694645

Following gene: 209694650

Centisome position: 35.57

GC content: 46.43

Gene sequence:

>603_bases
ATGCGAACCAGTGGTTTATTAGAACAATTAATGGAATCGTTACGATGCCTTCCCGGTGTTGGACCAAAATCAGCCCAGCG
AATGGCATTTCATCTTCTACAGCGTAATCGACAAGGTGGTATGCAATTAGCCGATGCACTTTCTCGTGCCATGTCTGAAA
TTGGGCATTGTTCAGAGTGTCGAACGTTTACCGAAGAAGACACGTGTGCAATTTGTCTTAATCCTAAGCGTCAAATGAAC
GGTGAGCTGTGTATTGTTGAAAGCCCTGCCGATATCGTTGCAGTGGAAGCCACGGGACAATTCTCAGGTCGCTATTTTGT
ATTGATGGGGCATTTATCCCCATTAGACGGTATTGGCCCAAGTGATATTGGATTGGATTTACTTGACCACCGCTTAGGGC
GTGGGGACATTAAAGAAGTCATTCTTGCCACAAACCCAACGGTGGAAGGTGAAGCTACGGCGCACTACATTGCGGAGATA
TGCCAAGAGCATCACGTGTCTGCAAGTCGTATTGCTCACGGTGTGCCAATGGGAGGTGAGTTAGAGTTAGTTGACGGTAC
TACGTTGTCTCATTCTATTTTGGGTCGTCAGAAGCTTTATTAG

Upstream 100 bases:

>100_bases
TATCTTAATTGATAAAAACTAAGATGAATAACGCATTATTTATCTTAGGGTAATTAGGCGGCTCATAGCTGCCTTTTTCT
ATTTAGGAATATAAGAAATT

Downstream 100 bases:

>100_bases
CCACTAAAAAGACACATAATTGGAGCATTCCACCACTGAGTGCTCCAAATAAATGAGCGTCTGTTGCGACACTGGCGTTA
ATTAGGGAAATCGTGGATGC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRTSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSRAMSEIGHCSECRTFTEEDTCAICLNPKRQMN
GELCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDLLDHRLGRGDIKEVILATNPTVEGEATAHYIAEI
CQEHHVSASRIAHGVPMGGELELVDGTTLSHSILGRQKLY

Sequences:

>Translated_200_residues
MRTSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSRAMSEIGHCSECRTFTEEDTCAICLNPKRQMN
GELCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDLLDHRLGRGDIKEVILATNPTVEGEATAHYIAEI
CQEHHVSASRIAHGVPMGGELELVDGTTLSHSILGRQKLY
>Mature_200_residues
MRTSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSRAMSEIGHCSECRTFTEEDTCAICLNPKRQMN
GELCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGPSDIGLDLLDHRLGRGDIKEVILATNPTVEGEATAHYIAEI
CQEHHVSASRIAHGVPMGGELELVDGTTLSHSILGRQKLY

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=76.3819095477387, Blast_Score=322, Evalue=1e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_ALISL (B6EJ44)

Other databases:

- EMBL:   FM178379
- RefSeq:   YP_002262574.1
- GeneID:   6986838
- GenomeReviews:   FM178379_GR
- KEGG:   vsa:VSAL_I1087
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21693; Mature: 21693

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSRAMSEIGHCSEC
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH
RTFTEEDTCAICLNPKRQMNGELCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGP
CCCCCCCCEEEEECCHHHCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
SDIGLDLLDHRLGRGDIKEVILATNPTVEGEATAHYIAEICQEHHVSASRIAHGVPMGGE
CCCCHHHHHHHCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCE
LELVDGTTLSHSILGRQKLY
EEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MRTSGLLEQLMESLRCLPGVGPKSAQRMAFHLLQRNRQGGMQLADALSRAMSEIGHCSEC
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHH
RTFTEEDTCAICLNPKRQMNGELCIVESPADIVAVEATGQFSGRYFVLMGHLSPLDGIGP
CCCCCCCCEEEEECCHHHCCCCEEEEECCCCEEEEEECCCCCCEEEEEEECCCCCCCCCC
SDIGLDLLDHRLGRGDIKEVILATNPTVEGEATAHYIAEICQEHHVSASRIAHGVPMGGE
CCCCHHHHHHHCCCCCHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHCCCCCCCE
LELVDGTTLSHSILGRQKLY
EEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA