| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yejL [C]
Identifier: 209694618
GI number: 209694618
Start: 1151258
End: 1151485
Strand: Reverse
Name: yejL [C]
Synonym: VSAL_I1058
Alternate gene names: 209694618
Gene position: 1151485-1151258 (Counterclockwise)
Preceding gene: 209694621
Following gene: 209694617
Centisome position: 34.63
GC content: 36.84
Gene sequence:
>228_bases ATGGCTATTACTTCGAAATACAGCAACAAACAAATTGAACAAATGTTAACAGAGATGGTCGATGTATTAGATAAACATCG TGCTCCTGCAGATCTATCTCTAATGTTGGTTGGTAACATTGCGACTAATGTACTAAACCAAGAAGTGCCAGCAGAACAGC GTAAAATTATCGCTGAAAAATTTGCTCAAGCGCTGCTTAGCTCATTAGATATTCCAAAAACTCACTAA
Upstream 100 bases:
>100_bases TACGTTTGAAAGGATTAAACTCATAATAGAAAAGGTTTTTAGTTGACGTACATAGTAGGTTATCATAAGCCGCTTTCACT ATCATTAACTGAAAAGACTT
Downstream 100 bases:
>100_bases GAGCGAGAATTCAATTCACATGGTCGATAGCGGAAATACATACGGCGATAAAGTGTCCAAGTTAATTACTTGGGGCCACT GGTTCAGCTTTTTCAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MAITSKYSNKQIEQMLTEMVDVLDKHRAPADLSLMLVGNIATNVLNQEVPAEQRKIIAEKFAQALLSSLDIPKTH
Sequences:
>Translated_75_residues MAITSKYSNKQIEQMLTEMVDVLDKHRAPADLSLMLVGNIATNVLNQEVPAEQRKIIAEKFAQALLSSLDIPKTH >Mature_74_residues AITSKYSNKQIEQMLTEMVDVLDKHRAPADLSLMLVGNIATNVLNQEVPAEQRKIIAEKFAQALLSSLDIPKTH
Specific function: Unknown
COG id: COG3082
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0352 family
Homologues:
Organism=Escherichia coli, GI1788514, Length=71, Percent_Identity=50.7042253521127, Blast_Score=82, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1058_ALISL (B6EIU9)
Other databases:
- EMBL: FM178379 - RefSeq: YP_002262546.1 - ProteinModelPortal: B6EIU9 - GeneID: 6986826 - GenomeReviews: FM178379_GR - KEGG: vsa:VSAL_I1058 - HOGENOM: HBG296839 - OMA: HQAPTDL - ProtClustDB: PRK13689 - HAMAP: MF_00816 - InterPro: IPR009857 - InterPro: IPR023202 - PIRSF: PIRSF006188 - ProDom: PD027794
Pfam domain/function: PF07208 DUF1414
EC number: NA
Molecular weight: Translated: 8362; Mature: 8231
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAITSKYSNKQIEQMLTEMVDVLDKHRAPADLSLMLVGNIATNVLNQEVPAEQRKIIAEK CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FAQALLSSLDIPKTH HHHHHHHHCCCCCCC >Mature Secondary Structure AITSKYSNKQIEQMLTEMVDVLDKHRAPADLSLMLVGNIATNVLNQEVPAEQRKIIAEK CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH FAQALLSSLDIPKTH HHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA