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The map label for this gene is ycgN [C]

Identifier: 209694568

GI number: 209694568

Start: 1109923

End: 1110495

Strand: Direct

Name: ycgN [C]

Synonym: VSAL_I1007

Alternate gene names: 209694568

Gene position: 1109923-1110495 (Clockwise)

Preceding gene: 209694566

Following gene: 209694572

Centisome position: 33.38

GC content: 41.54

Gene sequence:

>573_bases
ATGCGCAAAATACCACTCTTCATCTTTCAGGTCAAAGTTAGTCTGGATTCTTATCTTGTGATCTGTAAACCACTTGCACT
TTTATCTCAAGATGGGTATAAAACCGCCTCTTCCCATAATGAGTGTAAAGCAATGACTGAGCAATTTTGGCAACAAAAAA
AACTAGAAGAGATGACAGAGCAAGAGTGGGAATCTCTTTGTGACGGCTGTGGGAAGTGCTGTTTACATAAATTAATGGAT
GAAGATACCGATGAAGTTTACTACACCAATGTTGCGTGTAGTTGGCTAAATAGCAAAACGTGCTCATGCAAGGATTACGC
TAAGCGTTTTACCTCCGGTGAAGAGTGCTTAAAACTGAGTCGTGAGAACATCGCCGAGTTTAACTGGCTTCCAGTAACTT
GTGCGTATCGTTTATTAGCAGAAGGCAATCCGATCCCAGAATGGCACCCATTGATTACTGGATCTAAATCAGCGATGCAT
GCGGCTGGCGAAAGCGTTAGAAATAAAGTTGTGTATGCGATCGATGTGAAGAACTGGGAAGATCACATTACAAATCACCC
TCATAGAAACTAA

Upstream 100 bases:

>100_bases
TTGGCATTCCAGGAATAAATGAAGTAATACTTGGGGCAATACAGCAGGCACCGCAATATAATCTACATTCCATACATCAT
CTCATTGCATCAATTAAAGG

Downstream 100 bases:

>100_bases
GCTATACAAGGGTTTTCAGTAACTTAAAAATCAACACTGTACAAATAACCATATATAAATGCACATGTTGGTAAATTATG
TAGTCAATTTGTAGTCATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MRKIPLFIFQVKVSLDSYLVICKPLALLSQDGYKTASSHNECKAMTEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMD
EDTDEVYYTNVACSWLNSKTCSCKDYAKRFTSGEECLKLSRENIAEFNWLPVTCAYRLLAEGNPIPEWHPLITGSKSAMH
AAGESVRNKVVYAIDVKNWEDHITNHPHRN

Sequences:

>Translated_190_residues
MRKIPLFIFQVKVSLDSYLVICKPLALLSQDGYKTASSHNECKAMTEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMD
EDTDEVYYTNVACSWLNSKTCSCKDYAKRFTSGEECLKLSRENIAEFNWLPVTCAYRLLAEGNPIPEWHPLITGSKSAMH
AAGESVRNKVVYAIDVKNWEDHITNHPHRN
>Mature_190_residues
MRKIPLFIFQVKVSLDSYLVICKPLALLSQDGYKTASSHNECKAMTEQFWQQKKLEEMTEQEWESLCDGCGKCCLHKLMD
EDTDEVYYTNVACSWLNSKTCSCKDYAKRFTSGEECLKLSRENIAEFNWLPVTCAYRLLAEGNPIPEWHPLITGSKSAMH
AAGESVRNKVVYAIDVKNWEDHITNHPHRN

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=139, Percent_Identity=63.3093525179856, Blast_Score=199, Evalue=9e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 21875; Mature: 21875

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIPLFIFQVKVSLDSYLVICKPLALLSQDGYKTASSHNECKAMTEQFWQQKKLEEMTE
CCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QEWESLCDGCGKCCLHKLMDEDTDEVYYTNVACSWLNSKTCSCKDYAKRFTSGEECLKLS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
RENIAEFNWLPVTCAYRLLAEGNPIPEWHPLITGSKSAMHAAGESVRNKVVYAIDVKNWE
HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHH
DHITNHPHRN
HHHCCCCCCC
>Mature Secondary Structure
MRKIPLFIFQVKVSLDSYLVICKPLALLSQDGYKTASSHNECKAMTEQFWQQKKLEEMTE
CCCCCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QEWESLCDGCGKCCLHKLMDEDTDEVYYTNVACSWLNSKTCSCKDYAKRFTSGEECLKLS
HHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHH
RENIAEFNWLPVTCAYRLLAEGNPIPEWHPLITGSKSAMHAAGESVRNKVVYAIDVKNWE
HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHH
DHITNHPHRN
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA