Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is lnt [H]

Identifier: 209694555

GI number: 209694555

Start: 1095871

End: 1097376

Strand: Reverse

Name: lnt [H]

Synonym: VSAL_I0992

Alternate gene names: 209694555

Gene position: 1097376-1095871 (Counterclockwise)

Preceding gene: 209694556

Following gene: 209694553

Centisome position: 33.0

GC content: 40.7

Gene sequence:

>1506_bases
ATGCCCTTTTTAAACCATTATCTTTCTCGCCTTCTTATCGCTGTATTATTTGGTGCCAGTGCAACACTCGCTTTTGCGCC
TTATTCTTTATGGCCTTTTGCTTTTATTGCACCACTCGTTTTATTTCTGTTGTTGAATAACCAAACAACCAAACGATCCA
CATGGATTGGTTTTTTCTGGGGGATAGGTTATTTTGGCAGTGGCATAAATTGGATACATATCAGCATCGATAATTTTGGT
GGCATGCCTATCGCTGCAAGTCTTTTTCTAATGATCGGACTTATTAGCTATCTTGCTCTTTATCCCATGTTATTTGCTTT
TTTAGCCACTCGCTTTTTCTCTTTGCATTCCTTACATAAATATTTACTCGCTTTCCCTGCTCTTTGGTTAGTGACCGATT
GGTTGCGTGGCTGGGTCTTTACCGGCTTTCCATGGCTATGGCTTGGATACAGTCAAATAGATAGCCCTTTCTCTGCCTGG
GCTCCAATTTTTGGTGTCGAGGGCATTACCGCCATCATTATCCTTTCTGTCGGTGCAATCACTTACGCCTTACTAGAGAA
AAAATGGACTTTATTACTTGTTCCTGCAATTTTAGCGGCGACATCTTTTGCAATAAAACCATTTGATTGGGTAACACCAC
AACCTGAGAAAGCCACTAAAGTTGCGTTAATTCAGGGGAATGTTAATCAAGCATTAAAATGGCTACCAAGCGAACGTTGG
CCAACCATCATGAAATACATGGATTTAAGTCGTAAAAATTGGGATGCTGATTTAATCGTATGGCCAGAGGCTGCAATTCC
AGCGTTAGAAAGTGAGATCCCAAGCTTTCTTCGTAACCTTGATAGCGCTGCCACAATGAACAACAGCACTATAATTACCG
GTATTGTAGGTCAAAGCCCGACAGGTAATTTTTATAATAATATAATCTCGTTAGGTAAGAATGGAACAAATGGTTACGAT
TACCTTGAACAGCCAAGGTACAGCAAGCATCATTTACTTCCTTTTGGTGAATTTGTACCTTTTGAAGCATTACTTCGCCC
ATTAGCCCCTATTTTTAACTTACCAATGTCTTCTTTTAGCCGTGGTAGTTATATACAGCCAAACATTCAAGCAAGTGGTT
CTCATTTAGCGCCCGCATTATGCTATGAAATTGTTTATGGTGAACAAGTTAGAGAAAATATTACCGAACAAACTGATTAC
ATTTTAACGCTTTCTAATGACGCTTGGTTTGGCACTTCTATTGGTCCATTACAGCACATGGAAATGGCTCAGATGAGAGC
TTTAGAAACAGGAAAGCCCGTTATTCGTTCAACCAATAATGGCGTAACCGCGATCACGGATTACCGAGGAAACATCATTA
AGCAAATTCCTCAGTTCACAACGGCGGTATTGCGTGGGGAGGTCATTCCAACGACAGGTACAACCCCATATCGCTATTGG
GGAACATGGCCTTTGTACTTACTTGTGATGCTGTCTTTACTCATCGCTTGGCGTAAACAAAAATAA

Upstream 100 bases:

>100_bases
GAAGAGTAACATTCTCAGCCGCTTATTAATAAGCGGCTGAACTTTATCTGGCTTCCAGAGACTAAATAGCTGTTATTTCA
TTATTTGTTTGAGATCCTTC

Downstream 100 bases:

>100_bases
AAAGAATGCTTGGCCTGTATGCGTAAATATACGAATACAGGTCATTCAATCTACTAACCTCATTTTCACACTACGGTTTT
AACGACAAACGAGTGAATTC

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MPFLNHYLSRLLIAVLFGASATLAFAPYSLWPFAFIAPLVLFLLLNNQTTKRSTWIGFFWGIGYFGSGINWIHISIDNFG
GMPIAASLFLMIGLISYLALYPMLFAFLATRFFSLHSLHKYLLAFPALWLVTDWLRGWVFTGFPWLWLGYSQIDSPFSAW
APIFGVEGITAIIILSVGAITYALLEKKWTLLLVPAILAATSFAIKPFDWVTPQPEKATKVALIQGNVNQALKWLPSERW
PTIMKYMDLSRKNWDADLIVWPEAAIPALESEIPSFLRNLDSAATMNNSTIITGIVGQSPTGNFYNNIISLGKNGTNGYD
YLEQPRYSKHHLLPFGEFVPFEALLRPLAPIFNLPMSSFSRGSYIQPNIQASGSHLAPALCYEIVYGEQVRENITEQTDY
ILTLSNDAWFGTSIGPLQHMEMAQMRALETGKPVIRSTNNGVTAITDYRGNIIKQIPQFTTAVLRGEVIPTTGTTPYRYW
GTWPLYLLVMLSLLIAWRKQK

Sequences:

>Translated_501_residues
MPFLNHYLSRLLIAVLFGASATLAFAPYSLWPFAFIAPLVLFLLLNNQTTKRSTWIGFFWGIGYFGSGINWIHISIDNFG
GMPIAASLFLMIGLISYLALYPMLFAFLATRFFSLHSLHKYLLAFPALWLVTDWLRGWVFTGFPWLWLGYSQIDSPFSAW
APIFGVEGITAIIILSVGAITYALLEKKWTLLLVPAILAATSFAIKPFDWVTPQPEKATKVALIQGNVNQALKWLPSERW
PTIMKYMDLSRKNWDADLIVWPEAAIPALESEIPSFLRNLDSAATMNNSTIITGIVGQSPTGNFYNNIISLGKNGTNGYD
YLEQPRYSKHHLLPFGEFVPFEALLRPLAPIFNLPMSSFSRGSYIQPNIQASGSHLAPALCYEIVYGEQVRENITEQTDY
ILTLSNDAWFGTSIGPLQHMEMAQMRALETGKPVIRSTNNGVTAITDYRGNIIKQIPQFTTAVLRGEVIPTTGTTPYRYW
GTWPLYLLVMLSLLIAWRKQK
>Mature_500_residues
PFLNHYLSRLLIAVLFGASATLAFAPYSLWPFAFIAPLVLFLLLNNQTTKRSTWIGFFWGIGYFGSGINWIHISIDNFGG
MPIAASLFLMIGLISYLALYPMLFAFLATRFFSLHSLHKYLLAFPALWLVTDWLRGWVFTGFPWLWLGYSQIDSPFSAWA
PIFGVEGITAIIILSVGAITYALLEKKWTLLLVPAILAATSFAIKPFDWVTPQPEKATKVALIQGNVNQALKWLPSERWP
TIMKYMDLSRKNWDADLIVWPEAAIPALESEIPSFLRNLDSAATMNNSTIITGIVGQSPTGNFYNNIISLGKNGTNGYDY
LEQPRYSKHHLLPFGEFVPFEALLRPLAPIFNLPMSSFSRGSYIQPNIQASGSHLAPALCYEIVYGEQVRENITEQTDYI
LTLSNDAWFGTSIGPLQHMEMAQMRALETGKPVIRSTNNGVTAITDYRGNIIKQIPQFTTAVLRGEVIPTTGTTPYRYWG
TWPLYLLVMLSLLIAWRKQK

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=501, Percent_Identity=48.502994011976, Blast_Score=467, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 56363; Mature: 56232

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFLNHYLSRLLIAVLFGASATLAFAPYSLWPFAFIAPLVLFLLLNNQTTKRSTWIGFFW
CCHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
GIGYFGSGINWIHISIDNFGGMPIAASLFLMIGLISYLALYPMLFAFLATRFFSLHSLHK
HHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLAFPALWLVTDWLRGWVFTGFPWLWLGYSQIDSPFSAWAPIFGVEGITAIIILSVGAI
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHH
TYALLEKKWTLLLVPAILAATSFAIKPFDWVTPQPEKATKVALIQGNVNQALKWLPSERW
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCC
PTIMKYMDLSRKNWDADLIVWPEAAIPALESEIPSFLRNLDSAATMNNSTIITGIVGQSP
HHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
TGNFYNNIISLGKNGTNGYDYLEQPRYSKHHLLPFGEFVPFEALLRPLAPIFNLPMSSFS
CCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCC
RGSYIQPNIQASGSHLAPALCYEIVYGEQVRENITEQTDYILTLSNDAWFGTSIGPLQHM
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
EMAQMRALETGKPVIRSTNNGVTAITDYRGNIIKQIPQFTTAVLRGEVIPTTGTTPYRYW
HHHHHHHHHCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEC
GTWPLYLLVMLSLLIAWRKQK
CCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PFLNHYLSRLLIAVLFGASATLAFAPYSLWPFAFIAPLVLFLLLNNQTTKRSTWIGFFW
CHHHHHHHHHHHHHHHCCCHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
GIGYFGSGINWIHISIDNFGGMPIAASLFLMIGLISYLALYPMLFAFLATRFFSLHSLHK
HHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLAFPALWLVTDWLRGWVFTGFPWLWLGYSQIDSPFSAWAPIFGVEGITAIIILSVGAI
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHH
TYALLEKKWTLLLVPAILAATSFAIKPFDWVTPQPEKATKVALIQGNVNQALKWLPSERW
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHCCCCCC
PTIMKYMDLSRKNWDADLIVWPEAAIPALESEIPSFLRNLDSAATMNNSTIITGIVGQSP
HHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
TGNFYNNIISLGKNGTNGYDYLEQPRYSKHHLLPFGEFVPFEALLRPLAPIFNLPMSSFS
CCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCC
RGSYIQPNIQASGSHLAPALCYEIVYGEQVRENITEQTDYILTLSNDAWFGTSIGPLQHM
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHH
EMAQMRALETGKPVIRSTNNGVTAITDYRGNIIKQIPQFTTAVLRGEVIPTTGTTPYRYW
HHHHHHHHHCCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEC
GTWPLYLLVMLSLLIAWRKQK
CCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12620739 [H]