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The map label for this gene is 209694531

Identifier: 209694531

GI number: 209694531

Start: 1064843

End: 1066204

Strand: Reverse

Name: 209694531

Synonym: VSAL_I0966

Alternate gene names: NA

Gene position: 1066204-1064843 (Counterclockwise)

Preceding gene: 209694532

Following gene: 209694530

Centisome position: 32.06

GC content: 33.7

Gene sequence:

>1362_bases
ATGCCTTATCGTAAATTAAGAAATTTTAAAAGTTGGAGTCATATTGACCCACTAAGCAAAAAATTAAAATTTAATTATTC
TAAAGACATACAATTCTTTACGTGGAGCAATCATAATCCTTGTTATGAAGCAAATATGTTCGTGCATCAACGAATGCTAG
CTAAAATAGCAAATTCAACATTAAAACAAGAAGCAGGATTAATTATTCATCTTATCCACTTTGTTGAACAGCAACCCTCC
CTTACCTCTTTTAATCAACTTACCGACGCTACTTTCACTCTCTTTGTTCAAAATTTACAAAACGAAAGAGAACCTACCGG
CGAATTAAAACGCTCCAACAATCGTGTTATTGATATTGCAGAAAAATGTTTGGACTTTCTTAAATTCATTCAAGACCTTA
ATGATTTATCTCACTTCATAGGGAGTGATAAAGCCAATGCTATACGAACAACCGAAAAACCTTACAAAATAAAAATAGAT
GGACATAAGGGATATAAAATATGTATTTCAATTTCTCATAATAGTATTCCATCTAAAGATGCCATTAGAACAAGACACCC
AATATCTTCAAGTGATTCCTTAAAACTCTGGAACTACCTCAAGGCACAACCAGTAGGAAGAGATAAACGAACTAGAGATA
AGGCAATGTATGTTGTGATGGAGCAACTTGGTGCGAGGATCACAGAGTTTCACCTTATAACAATCTCAGATTATGAGGAG
GCAAGAAAAACAGGGTCGATAAAACTAACTACATTAAAGCGAAAAGAAGATAAACACCGCTTCCTTCCTATTCCCCAAAT
GGTTTTGAATTACATAGCTCCCTATATAAAAATTCGAAAGAGAGTCATGAATAAGAAAAGAACAAAACATGACATGCTGT
TTATTAATTTAAACAATGGAGAAGCATTTTCACCTAGTTCTTGGGGCGCTTACCTAAACCAGTGGAAAAGGGAAATAGGT
ATAGAGGGAAATTTACATGCTCACCTTTATAGACATGCGTTTATTACTGATAAGTTGAAAGAAATCATCCTTGCCCACAA
TGAAATAAATGGAAAGGATGGTTTTCGTAAACATTTATTGCACACGAAAGCATTCAAACAAGAGTTGCAGCAATGGACTG
GGCACACTCTATTGAGCTCATTGGATACCTACATTGATTTAGTTTTTGAAGATATCAACGGGTATACTGAGACCTATAAT
GCTGTTTCATTAAAAAACAGTGTTACACTTATAAAACGTCAACTTACTGATTTAAAAGACATCTATAAGAAAAAAGAACT
AACCCTAGGTGAATATAACTTACGTCTGAATGAAATGTTAAATAGCTTTGAGCAAGATATCGACAATAGTATAAACACAT
AA

Upstream 100 bases:

>100_bases
ATTTATGAAGGTTCTGTAGAAGAACGAAAGGAACTCTATCGAAAATTCAACGAAGGGGCCGAAACAAAATTAAGTTACAC
CCTTAATGGGAAGTTTTAAT

Downstream 100 bases:

>100_bases
TTTTGATACTCATCAGCGAAGATAATTAAAGCCTCAATTGACTGTATATTTAAACAGTTATCGCGTACAATTTAGACTTA
AAGAACTAATCTAAAACAAC

Product: phage recombinase/integrase

Products: NA

Alternate protein names: Phage Recombinase/Integrase; Phage Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Family Protein

Number of amino acids: Translated: 453; Mature: 452

Protein sequence:

>453_residues
MPYRKLRNFKSWSHIDPLSKKLKFNYSKDIQFFTWSNHNPCYEANMFVHQRMLAKIANSTLKQEAGLIIHLIHFVEQQPS
LTSFNQLTDATFTLFVQNLQNEREPTGELKRSNNRVIDIAEKCLDFLKFIQDLNDLSHFIGSDKANAIRTTEKPYKIKID
GHKGYKICISISHNSIPSKDAIRTRHPISSSDSLKLWNYLKAQPVGRDKRTRDKAMYVVMEQLGARITEFHLITISDYEE
ARKTGSIKLTTLKRKEDKHRFLPIPQMVLNYIAPYIKIRKRVMNKKRTKHDMLFINLNNGEAFSPSSWGAYLNQWKREIG
IEGNLHAHLYRHAFITDKLKEIILAHNEINGKDGFRKHLLHTKAFKQELQQWTGHTLLSSLDTYIDLVFEDINGYTETYN
AVSLKNSVTLIKRQLTDLKDIYKKKELTLGEYNLRLNEMLNSFEQDIDNSINT

Sequences:

>Translated_453_residues
MPYRKLRNFKSWSHIDPLSKKLKFNYSKDIQFFTWSNHNPCYEANMFVHQRMLAKIANSTLKQEAGLIIHLIHFVEQQPS
LTSFNQLTDATFTLFVQNLQNEREPTGELKRSNNRVIDIAEKCLDFLKFIQDLNDLSHFIGSDKANAIRTTEKPYKIKID
GHKGYKICISISHNSIPSKDAIRTRHPISSSDSLKLWNYLKAQPVGRDKRTRDKAMYVVMEQLGARITEFHLITISDYEE
ARKTGSIKLTTLKRKEDKHRFLPIPQMVLNYIAPYIKIRKRVMNKKRTKHDMLFINLNNGEAFSPSSWGAYLNQWKREIG
IEGNLHAHLYRHAFITDKLKEIILAHNEINGKDGFRKHLLHTKAFKQELQQWTGHTLLSSLDTYIDLVFEDINGYTETYN
AVSLKNSVTLIKRQLTDLKDIYKKKELTLGEYNLRLNEMLNSFEQDIDNSINT
>Mature_452_residues
PYRKLRNFKSWSHIDPLSKKLKFNYSKDIQFFTWSNHNPCYEANMFVHQRMLAKIANSTLKQEAGLIIHLIHFVEQQPSL
TSFNQLTDATFTLFVQNLQNEREPTGELKRSNNRVIDIAEKCLDFLKFIQDLNDLSHFIGSDKANAIRTTEKPYKIKIDG
HKGYKICISISHNSIPSKDAIRTRHPISSSDSLKLWNYLKAQPVGRDKRTRDKAMYVVMEQLGARITEFHLITISDYEEA
RKTGSIKLTTLKRKEDKHRFLPIPQMVLNYIAPYIKIRKRVMNKKRTKHDMLFINLNNGEAFSPSSWGAYLNQWKREIGI
EGNLHAHLYRHAFITDKLKEIILAHNEINGKDGFRKHLLHTKAFKQELQQWTGHTLLSSLDTYIDLVFEDINGYTETYNA
VSLKNSVTLIKRQLTDLKDIYKKKELTLGEYNLRLNEMLNSFEQDIDNSINT

Specific function: Unknown

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52992; Mature: 52860

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYRKLRNFKSWSHIDPLSKKLKFNYSKDIQFFTWSNHNPCYEANMFVHQRMLAKIANST
CCCHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LKQEAGLIIHLIHFVEQQPSLTSFNQLTDATFTLFVQNLQNEREPTGELKRSNNRVIDIA
HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEHHH
EKCLDFLKFIQDLNDLSHFIGSDKANAIRTTEKPYKIKIDGHKGYKICISISHNSIPSKD
HHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCEEEEEEEECCCCCCCH
AIRTRHPISSSDSLKLWNYLKAQPVGRDKRTRDKAMYVVMEQLGARITEFHLITISDYEE
HHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCHHH
ARKTGSIKLTTLKRKEDKHRFLPIPQMVLNYIAPYIKIRKRVMNKKRTKHDMLFINLNNG
HHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
EAFSPSSWGAYLNQWKREIGIEGNLHAHLYRHAFITDKLKEIILAHNEINGKDGFRKHLL
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HTKAFKQELQQWTGHTLLSSLDTYIDLVFEDINGYTETYNAVSLKNSVTLIKRQLTDLKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHH
IYKKKELTLGEYNLRLNEMLNSFEQDIDNSINT
HHHHHCCCCCHHCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PYRKLRNFKSWSHIDPLSKKLKFNYSKDIQFFTWSNHNPCYEANMFVHQRMLAKIANST
CCHHHHCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LKQEAGLIIHLIHFVEQQPSLTSFNQLTDATFTLFVQNLQNEREPTGELKRSNNRVIDIA
HHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEHHH
EKCLDFLKFIQDLNDLSHFIGSDKANAIRTTEKPYKIKIDGHKGYKICISISHNSIPSKD
HHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEECCCCEEEEEEEECCCCCCCH
AIRTRHPISSSDSLKLWNYLKAQPVGRDKRTRDKAMYVVMEQLGARITEFHLITISDYEE
HHHCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCHHH
ARKTGSIKLTTLKRKEDKHRFLPIPQMVLNYIAPYIKIRKRVMNKKRTKHDMLFINLNNG
HHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
EAFSPSSWGAYLNQWKREIGIEGNLHAHLYRHAFITDKLKEIILAHNEINGKDGFRKHLL
CCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
HTKAFKQELQQWTGHTLLSSLDTYIDLVFEDINGYTETYNAVSLKNSVTLIKRQLTDLKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHH
IYKKKELTLGEYNLRLNEMLNSFEQDIDNSINT
HHHHHCCCCCHHCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA