Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is bolA [H]

Identifier: 209694515

GI number: 209694515

Start: 1045625

End: 1045939

Strand: Direct

Name: bolA [H]

Synonym: VSAL_I0948

Alternate gene names: 209694515

Gene position: 1045625-1045939 (Clockwise)

Preceding gene: 209694508

Following gene: 209694516

Centisome position: 31.45

GC content: 37.46

Gene sequence:

>315_bases
ATGATTCAGCAACAAATAGAGCAAAAATTACACTCAGAGCTGTCTTCATCATACTTAAAAGTATTGAATGAGAGTTATAT
GCACAATGTACCAGAAGGATCTGAGAGCCATTTTAAAGTCATAGTGGTTAGTGATCAGTTTAATGATAAGCGCTTATTAG
CTCGTCATCGAATGATTAATGCAATATTAGCGGATGAATTGGCGAACCATATTCATGCACTAGCCATTCATACTTACACG
GAATCAGAATGGCAGGCGTTGGATTCTGAATTGGTTCCGAGCTCACCTAATTGTATGGGTGGATCAAAAAGTTAA

Upstream 100 bases:

>100_bases
TTTTCATATATAGGATCTTCAAATAAGGAACGCTTCTGGCTATTGTCGCAAATGGTGTATAAAGTGGAAATAGAAGAATT
GAAATAAAGAAGGGATTTAT

Downstream 100 bases:

>100_bases
TGATGAAACAAGATTGTTTATTCCTTAACATTAAGCAAACAATGGTTACTTTTTCTTGTTGATTTTTTACGTGTTACCCA
TGTCATTGCCACTAAGGTGG

Product: BolA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MIQQQIEQKLHSELSSSYLKVLNESYMHNVPEGSESHFKVIVVSDQFNDKRLLARHRMINAILADELANHIHALAIHTYT
ESEWQALDSELVPSSPNCMGGSKS

Sequences:

>Translated_104_residues
MIQQQIEQKLHSELSSSYLKVLNESYMHNVPEGSESHFKVIVVSDQFNDKRLLARHRMINAILADELANHIHALAIHTYT
ESEWQALDSELVPSSPNCMGGSKS
>Mature_104_residues
MIQQQIEQKLHSELSSSYLKVLNESYMHNVPEGSESHFKVIVVSDQFNDKRLLARHRMINAILADELANHIHALAIHTYT
ESEWQALDSELVPSSPNCMGGSKS

Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And

COG id: COG0271

COG function: function code T; Stress-induced morphogen (activity unknown)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Homo sapiens, GI7705638, Length=102, Percent_Identity=43.1372549019608, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI87081740, Length=102, Percent_Identity=52.9411764705882, Blast_Score=119, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17541430, Length=100, Percent_Identity=43, Blast_Score=94, Evalue=1e-20,
Organism=Drosophila melanogaster, GI221459039, Length=105, Percent_Identity=42.8571428571429, Blast_Score=87, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 11774; Mature: 11774

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQQQIEQKLHSELSSSYLKVLNESYMHNVPEGSESHFKVIVVSDQFNDKRLLARHRMIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
AILADELANHIHALAIHTYTESEWQALDSELVPSSPNCMGGSKS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIQQQIEQKLHSELSSSYLKVLNESYMHNVPEGSESHFKVIVVSDQFNDKRLLARHRMIN
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHH
AILADELANHIHALAIHTYTESEWQALDSELVPSSPNCMGGSKS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7805867 [H]