Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209694499

Identifier: 209694499

GI number: 209694499

Start: 1029589

End: 1029864

Strand: Reverse

Name: 209694499

Synonym: VSAL_I0931

Alternate gene names: NA

Gene position: 1029864-1029589 (Counterclockwise)

Preceding gene: 209694501

Following gene: 209694489

Centisome position: 30.97

GC content: 36.96

Gene sequence:

>276_bases
ATGAAATCAGACGTAGATAAAATGTTGAATAAACATCAAGACTTAACTCATAGTACGGATATGAAAGTAACCTCTCACAC
TCAACGTGAAGTTGGGGATTGGGTGCTGCATACCGTTATGATTGAAAACTGCAATACTCCGTTTAAATTTAAACGAAGCC
AAGCCTACAAATCACTTAAAGGCGCGAACGTAAACATGACTTACTATCCTAGTACTGAGTCTCTTGCCGGTTTTGAACTT
GAAATAATGAAAGTTGTTCGAATTAAACGCAGTTAA

Upstream 100 bases:

>100_bases
TTTCTTAGACATGGTAATTTCCCTATATTATGGTTGAATAGTAACAATGCGTTGAAAATAAGATTATCATGGTTTTGTAT
ATATATTACTGGTGAGCCCA

Downstream 100 bases:

>100_bases
TTTTTCCGTTTTAGCTCTGCTTTATAAAAAACCAAAGCATCTAAAATCGATTTTTCTTTAATTGGCTTAGTTATAATGTA
ATCCGCACCTGCAGATAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLKGANVNMTYYPSTESLAGFEL
EIMKVVRIKRS

Sequences:

>Translated_91_residues
MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLKGANVNMTYYPSTESLAGFEL
EIMKVVRIKRS
>Mature_91_residues
MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLKGANVNMTYYPSTESLAGFEL
EIMKVVRIKRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10552; Mature: 10552

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLK
CCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHC
GANVNMTYYPSTESLAGFELEIMKVVRIKRS
CCCCEEEECCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLK
CCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHC
GANVNMTYYPSTESLAGFELEIMKVVRIKRS
CCCCEEEECCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA