| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209694499
Identifier: 209694499
GI number: 209694499
Start: 1029589
End: 1029864
Strand: Reverse
Name: 209694499
Synonym: VSAL_I0931
Alternate gene names: NA
Gene position: 1029864-1029589 (Counterclockwise)
Preceding gene: 209694501
Following gene: 209694489
Centisome position: 30.97
GC content: 36.96
Gene sequence:
>276_bases ATGAAATCAGACGTAGATAAAATGTTGAATAAACATCAAGACTTAACTCATAGTACGGATATGAAAGTAACCTCTCACAC TCAACGTGAAGTTGGGGATTGGGTGCTGCATACCGTTATGATTGAAAACTGCAATACTCCGTTTAAATTTAAACGAAGCC AAGCCTACAAATCACTTAAAGGCGCGAACGTAAACATGACTTACTATCCTAGTACTGAGTCTCTTGCCGGTTTTGAACTT GAAATAATGAAAGTTGTTCGAATTAAACGCAGTTAA
Upstream 100 bases:
>100_bases TTTCTTAGACATGGTAATTTCCCTATATTATGGTTGAATAGTAACAATGCGTTGAAAATAAGATTATCATGGTTTTGTAT ATATATTACTGGTGAGCCCA
Downstream 100 bases:
>100_bases TTTTTCCGTTTTAGCTCTGCTTTATAAAAAACCAAAGCATCTAAAATCGATTTTTCTTTAATTGGCTTAGTTATAATGTA ATCCGCACCTGCAGATAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLKGANVNMTYYPSTESLAGFEL EIMKVVRIKRS
Sequences:
>Translated_91_residues MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLKGANVNMTYYPSTESLAGFEL EIMKVVRIKRS >Mature_91_residues MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLKGANVNMTYYPSTESLAGFEL EIMKVVRIKRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10552; Mature: 10552
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLK CCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHC GANVNMTYYPSTESLAGFELEIMKVVRIKRS CCCCEEEECCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MKSDVDKMLNKHQDLTHSTDMKVTSHTQREVGDWVLHTVMIENCNTPFKFKRSQAYKSLK CCCHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHC GANVNMTYYPSTESLAGFELEIMKVVRIKRS CCCCEEEECCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA