Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

Click here to switch to the map view.

The map label for this gene is yheV [H]

Identifier: 209693907

GI number: 209693907

Start: 348447

End: 348641

Strand: Direct

Name: yheV [H]

Synonym: VSAL_I0301

Alternate gene names: 209693907

Gene position: 348447-348641 (Clockwise)

Preceding gene: 209693906

Following gene: 209693908

Centisome position: 10.48

GC content: 41.54

Gene sequence:

>195_bases
GTGAAAAAAAGATTCATTGCGGGTGCAGTTTGTCCGTCATGTAAAGTGTCAGACACTCTACGTTGGTGGCAAGAAAGTAA
TATTGAGCATGTCGAATGTGTGGAGTGTGGTCATATGGATCGCAGAACCCCGAAATCGATAGAAACAAGCAAACACGCTC
AAGATGATGTTATTGGTGTATTTAAACCTGAATAG

Upstream 100 bases:

>100_bases
AAGCCGCTCGAATAGAGTTAGAAGAGATTTTTGGTTTGGAAATGGAAAGTGAACGTTCAAACCAGGCTCACTGGGATTAA
TTTGCACAAGGATATTTACC

Downstream 100 bases:

>100_bases
CGTTATCTTTGTGGCAATAAATATCATCCTTTAATGCGAAGTGCATCCGGAGTTAAAATGAAAATTGAAAAGAATGTTGT
AGTTAGCCTTGCTTACCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 64; Mature: 64

Protein sequence:

>64_residues
MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGVFKPE

Sequences:

>Translated_64_residues
MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGVFKPE
>Mature_64_residues
MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGVFKPE

Specific function: Unknown

COG id: COG3529

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082247, Length=64, Percent_Identity=45.3125, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012658 [H]

Pfam domain/function: PF09526 DUF2387 [H]

EC number: NA

Molecular weight: Translated: 7345; Mature: 7345

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGV
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
FKPE
ECCC
>Mature Secondary Structure
MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGV
CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE
FKPE
ECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]