| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is yheV [H]
Identifier: 209693907
GI number: 209693907
Start: 348447
End: 348641
Strand: Direct
Name: yheV [H]
Synonym: VSAL_I0301
Alternate gene names: 209693907
Gene position: 348447-348641 (Clockwise)
Preceding gene: 209693906
Following gene: 209693908
Centisome position: 10.48
GC content: 41.54
Gene sequence:
>195_bases GTGAAAAAAAGATTCATTGCGGGTGCAGTTTGTCCGTCATGTAAAGTGTCAGACACTCTACGTTGGTGGCAAGAAAGTAA TATTGAGCATGTCGAATGTGTGGAGTGTGGTCATATGGATCGCAGAACCCCGAAATCGATAGAAACAAGCAAACACGCTC AAGATGATGTTATTGGTGTATTTAAACCTGAATAG
Upstream 100 bases:
>100_bases AAGCCGCTCGAATAGAGTTAGAAGAGATTTTTGGTTTGGAAATGGAAAGTGAACGTTCAAACCAGGCTCACTGGGATTAA TTTGCACAAGGATATTTACC
Downstream 100 bases:
>100_bases CGTTATCTTTGTGGCAATAAATATCATCCTTTAATGCGAAGTGCATCCGGAGTTAAAATGAAAATTGAAAAGAATGTTGT AGTTAGCCTTGCTTACCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGVFKPE
Sequences:
>Translated_64_residues MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGVFKPE >Mature_64_residues MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGVFKPE
Specific function: Unknown
COG id: COG3529
COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082247, Length=64, Percent_Identity=45.3125, Blast_Score=68, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012658 [H]
Pfam domain/function: PF09526 DUF2387 [H]
EC number: NA
Molecular weight: Translated: 7345; Mature: 7345
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGV CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE FKPE ECCC >Mature Secondary Structure MKKRFIAGAVCPSCKVSDTLRWWQESNIEHVECVECGHMDRRTPKSIETSKHAQDDVIGV CCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEE FKPE ECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]