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The map label for this gene is hpcD

Identifier: 209693891

GI number: 209693891

Start: 333134

End: 333484

Strand: Direct

Name: hpcD

Synonym: VSAL_I0284

Alternate gene names: NA

Gene position: 333134-333484 (Clockwise)

Preceding gene: 209693888

Following gene: 209693892

Centisome position: 10.02

GC content: 40.17

Gene sequence:

>351_bases
ATGATGCCGCACTTAGTTATGGAATATTCAAATTCAGCAGACGAACGATTAAATATGCAGGGCTTGTTAGAAGATTTACA
TCAAGTGGCGATAGAGTCGGAACTGTTTTCTGTTGATGATGTTAAATCAAGGGCGATTCGAGTGCATTCATGGTTAGTTG
GCGATAAAGGAAATAGTGTGGACTTTATTCACATTACCATCGAGCTACTGTCAGGCAGAACCACTGAGCAAAAAAGAGAA
CTCAGTCGAGCATTAATGGATGTACTAGCAGAACAGGCGAGCCATATTGATAGCCTCACGATTAATGTGCGTGATATGGA
AAAAGAAAGCTTTCAAAAAGTGGGTCAATAA

Upstream 100 bases:

>100_bases
TAACTTGTGCACTTTTTTATTGAGGGGATTGTAACTTAATCTCTTTCACTGAATGATGGAAAAGTAATCACTTTTATTCT
GCTACACAAACAAGGAAGTA

Downstream 100 bases:

>100_bases
GTACGGCTGCGAGACAAAGCCCCTGCGTATTTTTTAATGTTTGATTTTACATTGAGCATTAGGAAATTGAATAATATCGG
CGGCTTGATGCTCATCCATG

Product: 5-carboxymethyl-2-hydroxymuconate isomerase

Products: 5-carboxy-2-oxohept-3-enedioate

Alternate protein names: 5-Carboxymethyl-2-Hydroxymuconate Isomerase; 5-Carboxymethyl-2-Hydroxymuconate Delta-Isomerase; 5-Carboxymethyl-2-Hydroxymuconate D-Isomerase

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MMPHLVMEYSNSADERLNMQGLLEDLHQVAIESELFSVDDVKSRAIRVHSWLVGDKGNSVDFIHITIELLSGRTTEQKRE
LSRALMDVLAEQASHIDSLTINVRDMEKESFQKVGQ

Sequences:

>Translated_116_residues
MMPHLVMEYSNSADERLNMQGLLEDLHQVAIESELFSVDDVKSRAIRVHSWLVGDKGNSVDFIHITIELLSGRTTEQKRE
LSRALMDVLAEQASHIDSLTINVRDMEKESFQKVGQ
>Mature_116_residues
MMPHLVMEYSNSADERLNMQGLLEDLHQVAIESELFSVDDVKSRAIRVHSWLVGDKGNSVDFIHITIELLSGRTTEQKRE
LSRALMDVLAEQASHIDSLTINVRDMEKESFQKVGQ

Specific function: Unknown

COG id: COG3232

COG function: function code E; 5-carboxymethyl-2-hydroxymuconate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.3.3.10

Molecular weight: Translated: 13210; Mature: 13210

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPHLVMEYSNSADERLNMQGLLEDLHQVAIESELFSVDDVKSRAIRVHSWLVGDKGNSV
CCCCHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCCE
DFIHITIELLSGRTTEQKRELSRALMDVLAEQASHIDSLTINVRDMEKESFQKVGQ
EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCHHHHHHHCC
>Mature Secondary Structure
MMPHLVMEYSNSADERLNMQGLLEDLHQVAIESELFSVDDVKSRAIRVHSWLVGDKGNSV
CCCCHHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCCCCCE
DFIHITIELLSGRTTEQKRELSRALMDVLAEQASHIDSLTINVRDMEKESFQKVGQ
EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 5-carboxymethyl-2-hydroxymuconate

Specific reaction: 5-carboxymethyl-2-hydroxymuconate = 5-carboxy-2-oxohept-3-enedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA