Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is wzz [C]

Identifier: 209693886

GI number: 209693886

Start: 327417

End: 328394

Strand: Direct

Name: wzz [C]

Synonym: VSAL_I0278

Alternate gene names: 209693886

Gene position: 327417-328394 (Clockwise)

Preceding gene: 209693885

Following gene: 209693887

Centisome position: 9.85

GC content: 42.64

Gene sequence:

>978_bases
ATGAATGAAAAACAACAACTGCCACATTCTCAACATTTAGCGTTTCCACCGGCAATGCCCGCCGACGACGAGATCGACTT
ACGTGAGCTCTTTGGCGCACTGTGGAAAGGCAAATGGATAATCATAGCAACCACGTTTATTTTTGCTGTCGGTGGCGTAT
TATTTGCGTTATCACAACCTAACACCTACAAAGCGGAAGTTGTATTAGCCCCTGCGGGCGAGAGCGGCGGTGGCCTTGCG
GTAATGGCAGGAGAGTTAGGTGGCTTAGCCTCATTAGCAGGTATTAACATTGGCGGCGGTGGTACTGACAGCAAAGGTAT
GTCATTAGCCGTTTTGCAATCTCGTCAATTCATTAATGCCTTTATTACCAAGCATGATTTGGTTGTACCGTTATTTGCAG
GTACTGAATGGAATAAACAGTCGGGTGAGTTAATCATTGACCCTGAGGTTTATAATACAGAAACAAAAGAGTGGGTGCGT
GAAGTTAAACCAGATGAGTCACCAGTACCAACAGATTGGCAAGCACACAAAGCGTTTAAAGGTTTTTTAAGTACCGCTGA
TGCTAAAGACACGGGTTTAGTTACTTTATCCGTTACTCATATTTCTCCAATTATTGCTCAACAATGGGTAGAGTGGTTAG
TGGCTGATTTGAACCTTTGGATGAAAGATAAGTCTCTTACTGAAACCAAACGTAATATCGGATATTTAGAGCAGCAGTTA
CAAAAAACCGATATCTCTGACATGCGCTCAGTGTTTTATCAGTTAATTGAAGATCAAACTAAAAACCTGATGTTGGCAGA
GGTTGAAGCGGAGTTTGCCTTTAAAACCATAGACCCAGCGGTTATTCCAGAAGAGAAAGCCGGACCAAAACGTGCCTTAA
TTTGTGTGTTGTCAGTATTATTAGGCGGCATGTTAGGTGTGGCGGTGGTATTAGTGAGATTCGCATTTAGAAAAGAAGAA
CTAGAAACTAGAAACTAG

Upstream 100 bases:

>100_bases
TCTAACTCTCAAATATAAGGAAAACAAAGAGCATAAAGACTCAAAAAGCCAAATAAACCAAGCTTTTATAGTCTCTAGCC
TCTAGTTTCTAGTTTCTAGC

Downstream 100 bases:

>100_bases
AAACTAGAAAGATCAAGAGCAGTGATGCATTCTGCTCTTGATCTTTTTTTAGCTTTGGCTTTGCTTTTATAGGAGCGAAG
CGGTCTAGTCTCTAGTTTCT

Product: O-antigen length determinant protein

Products: NA

Alternate protein names: Chain Length Determinant Protein; Lipopolysaccharide Biosynthesis; Chain Length Determinant Family Protein; OtnB Protein; O-Antigen Length Determinant Protein

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNEKQQLPHSQHLAFPPAMPADDEIDLRELFGALWKGKWIIIATTFIFAVGGVLFALSQPNTYKAEVVLAPAGESGGGLA
VMAGELGGLASLAGINIGGGGTDSKGMSLAVLQSRQFINAFITKHDLVVPLFAGTEWNKQSGELIIDPEVYNTETKEWVR
EVKPDESPVPTDWQAHKAFKGFLSTADAKDTGLVTLSVTHISPIIAQQWVEWLVADLNLWMKDKSLTETKRNIGYLEQQL
QKTDISDMRSVFYQLIEDQTKNLMLAEVEAEFAFKTIDPAVIPEEKAGPKRALICVLSVLLGGMLGVAVVLVRFAFRKEE
LETRN

Sequences:

>Translated_325_residues
MNEKQQLPHSQHLAFPPAMPADDEIDLRELFGALWKGKWIIIATTFIFAVGGVLFALSQPNTYKAEVVLAPAGESGGGLA
VMAGELGGLASLAGINIGGGGTDSKGMSLAVLQSRQFINAFITKHDLVVPLFAGTEWNKQSGELIIDPEVYNTETKEWVR
EVKPDESPVPTDWQAHKAFKGFLSTADAKDTGLVTLSVTHISPIIAQQWVEWLVADLNLWMKDKSLTETKRNIGYLEQQL
QKTDISDMRSVFYQLIEDQTKNLMLAEVEAEFAFKTIDPAVIPEEKAGPKRALICVLSVLLGGMLGVAVVLVRFAFRKEE
LETRN
>Mature_325_residues
MNEKQQLPHSQHLAFPPAMPADDEIDLRELFGALWKGKWIIIATTFIFAVGGVLFALSQPNTYKAEVVLAPAGESGGGLA
VMAGELGGLASLAGINIGGGGTDSKGMSLAVLQSRQFINAFITKHDLVVPLFAGTEWNKQSGELIIDPEVYNTETKEWVR
EVKPDESPVPTDWQAHKAFKGFLSTADAKDTGLVTLSVTHISPIIAQQWVEWLVADLNLWMKDKSLTETKRNIGYLEQQL
QKTDISDMRSVFYQLIEDQTKNLMLAEVEAEFAFKTIDPAVIPEEKAGPKRALICVLSVLLGGMLGVAVVLVRFAFRKEE
LETRN

Specific function: Part Of The Ferric Enterobactin Transport System. [C]

COG id: COG3206

COG function: function code M; Uncharacterized protein involved in exopolysaccharide biosynthesis

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35710; Mature: 35710

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKQQLPHSQHLAFPPAMPADDEIDLRELFGALWKGKWIIIATTFIFAVGGVLFALSQP
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHEEECCC
NTYKAEVVLAPAGESGGGLAVMAGELGGLASLAGINIGGGGTDSKGMSLAVLQSRQFINA
CCEEEEEEEEECCCCCCCEEEEECCCCCHHHHHCEECCCCCCCCCCCEEEHHHHHHHHHH
FITKHDLVVPLFAGTEWNKQSGELIIDPEVYNTETKEWVREVKPDESPVPTDWQAHKAFK
HHHHCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH
GFLSTADAKDTGLVTLSVTHISPIIAQQWVEWLVADLNLWMKDKSLTETKRNIGYLEQQL
HHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QKTDISDMRSVFYQLIEDQTKNLMLAEVEAEFAFKTIDPAVIPEEKAGPKRALICVLSVL
HHCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
LGGMLGVAVVLVRFAFRKEELETRN
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNEKQQLPHSQHLAFPPAMPADDEIDLRELFGALWKGKWIIIATTFIFAVGGVLFALSQP
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHEEECCC
NTYKAEVVLAPAGESGGGLAVMAGELGGLASLAGINIGGGGTDSKGMSLAVLQSRQFINA
CCEEEEEEEEECCCCCCCEEEEECCCCCHHHHHCEECCCCCCCCCCCEEEHHHHHHHHHH
FITKHDLVVPLFAGTEWNKQSGELIIDPEVYNTETKEWVREVKPDESPVPTDWQAHKAFK
HHHHCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHH
GFLSTADAKDTGLVTLSVTHISPIIAQQWVEWLVADLNLWMKDKSLTETKRNIGYLEQQL
HHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QKTDISDMRSVFYQLIEDQTKNLMLAEVEAEFAFKTIDPAVIPEEKAGPKRALICVLSVL
HHCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
LGGMLGVAVVLVRFAFRKEELETRN
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA