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The map label for this gene is iucD [H]

Identifier: 209693757

GI number: 209693757

Start: 171464

End: 172792

Strand: Direct

Name: iucD [H]

Synonym: VSAL_I0135

Alternate gene names: 209693757

Gene position: 171464-172792 (Clockwise)

Preceding gene: 209693756

Following gene: 209693758

Centisome position: 5.16

GC content: 39.73

Gene sequence:

>1329_bases
GTGAATAAAAATATATACGATATTTTAGGTGTCGGTATTGGTCCATTTAATCTTAGCCTTGCCGCCCTTTCTTCCTCTGT
TCCTGACTGTAAAAGCATTTTTCTTGATGCTCGTAGCCACTTCGATTGGCACCCAGGGATGATGTTAGAGGGCACAAGAT
TACAGACACCTTTTATGTCTGACCTTGTCACAATGGCTGATCCAACCAATGAATACAGTTTTCTTAACTACGCAAAATTA
AATGATCGTCTGTACCCTTTTTATATAAGAGAAAACTTCTTTTTAGCCAGAGAAGAATACAACCACTATTGCCAATGGGC
TTGTAACCGCCTATCAAACCTAACGTTTAATAGCTGCGTCACCCATATTGATTATGATGAAAATGAGGCGATATATTGCG
TAAAAACACAAAACACGTTACTGGATCGTGAAGAAACCTATTACTGCCATCATTTAGTTCTCGGCACTGGGACACAGCCT
TACCTGCCTGACTTTTGCAGTAAAAAGGAACCGAAAGTGACCCACTCTGCTCACTACCTAATGAATAAAGCAGAATTAAA
AGCGTCTACCTGCATCACTGTTGTTGGTAGTGGTCAAAGTGCGGCTGAGATTTTCTATGATTTATTAACCGACATCGACG
TAGAAAAGTACCGTCTTCGCTGGCTAACGCGTTCTCCTCGATTCTTCTCATTGGAGTATACAAAACTCACATTGGAAATG
ACGTCACCAGAATACATCGACTATTTCCATCAACTTGAACCAGAGCAACGCCGAGTATTAATCCAGAAACAAAAGCACCT
ATATAAAGGCATTAACGCCGATTTGATTAATGATATTTATGATCTTTTATACATTAAACAGTTATCACATGACTTTACTG
TTGAAATGATGACGAACGTTTCTGTTCACTCTTTATCAAGCGAACAATCACAGGTAACGCTTCATTGTCTGCACACTGAA
ACTCAACATAATTTCGAACTACAGACTCAACACATTGTGATGGCAACGGGTTATGAATATCAATTACCTCAATTTCTAGA
TGGCATTTGCGCGCATTTACGCTTTGATTCACATGGAGAACTTGATGTTCAGCGAAACTACAGCGTTGATAGAAACAACA
AAATCTTCGTACAAAACGTTGGCTTACATACTCATGGGCTGACTTCCCCAGATCTTGGAATGGTGTGCTATAGAAACGCG
ACCATTTTGAATCAGGTACTTGGCAGAACCCACTACAAAGTAGAAAAATCCATCGCCTTTCAGCAATTCTCTCCTCCAAA
TTGCGAAAGTCATTTATATAACGCAACCACTGAACACTCACTCGAATAA

Upstream 100 bases:

>100_bases
ATCGTTGCCGTATTTGAAGCCATTAATACGTGTGGTCATTCAATCACCGAGCAACTGCTTACCAATGTAAAACAAAGCGC
CTAATAAAAAAGGATATCCA

Downstream 100 bases:

>100_bases
AGAGATAACGATGACAGATTTCACAGCCAAAGCTCAATGTAGCTTTACGGATCGTTACGCGCCAAAAAAAGACCAATTAA
TCAATATCTCTGAATTTGAG

Product: siderophore biosynthetis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MNKNIYDILGVGIGPFNLSLAALSSSVPDCKSIFLDARSHFDWHPGMMLEGTRLQTPFMSDLVTMADPTNEYSFLNYAKL
NDRLYPFYIRENFFLAREEYNHYCQWACNRLSNLTFNSCVTHIDYDENEAIYCVKTQNTLLDREETYYCHHLVLGTGTQP
YLPDFCSKKEPKVTHSAHYLMNKAELKASTCITVVGSGQSAAEIFYDLLTDIDVEKYRLRWLTRSPRFFSLEYTKLTLEM
TSPEYIDYFHQLEPEQRRVLIQKQKHLYKGINADLINDIYDLLYIKQLSHDFTVEMMTNVSVHSLSSEQSQVTLHCLHTE
TQHNFELQTQHIVMATGYEYQLPQFLDGICAHLRFDSHGELDVQRNYSVDRNNKIFVQNVGLHTHGLTSPDLGMVCYRNA
TILNQVLGRTHYKVEKSIAFQQFSPPNCESHLYNATTEHSLE

Sequences:

>Translated_442_residues
MNKNIYDILGVGIGPFNLSLAALSSSVPDCKSIFLDARSHFDWHPGMMLEGTRLQTPFMSDLVTMADPTNEYSFLNYAKL
NDRLYPFYIRENFFLAREEYNHYCQWACNRLSNLTFNSCVTHIDYDENEAIYCVKTQNTLLDREETYYCHHLVLGTGTQP
YLPDFCSKKEPKVTHSAHYLMNKAELKASTCITVVGSGQSAAEIFYDLLTDIDVEKYRLRWLTRSPRFFSLEYTKLTLEM
TSPEYIDYFHQLEPEQRRVLIQKQKHLYKGINADLINDIYDLLYIKQLSHDFTVEMMTNVSVHSLSSEQSQVTLHCLHTE
TQHNFELQTQHIVMATGYEYQLPQFLDGICAHLRFDSHGELDVQRNYSVDRNNKIFVQNVGLHTHGLTSPDLGMVCYRNA
TILNQVLGRTHYKVEKSIAFQQFSPPNCESHLYNATTEHSLE
>Mature_442_residues
MNKNIYDILGVGIGPFNLSLAALSSSVPDCKSIFLDARSHFDWHPGMMLEGTRLQTPFMSDLVTMADPTNEYSFLNYAKL
NDRLYPFYIRENFFLAREEYNHYCQWACNRLSNLTFNSCVTHIDYDENEAIYCVKTQNTLLDREETYYCHHLVLGTGTQP
YLPDFCSKKEPKVTHSAHYLMNKAELKASTCITVVGSGQSAAEIFYDLLTDIDVEKYRLRWLTRSPRFFSLEYTKLTLEM
TSPEYIDYFHQLEPEQRRVLIQKQKHLYKGINADLINDIYDLLYIKQLSHDFTVEMMTNVSVHSLSSEQSQVTLHCLHTE
TQHNFELQTQHIVMATGYEYQLPQFLDGICAHLRFDSHGELDVQRNYSVDRNNKIFVQNVGLHTHGLTSPDLGMVCYRNA
TILNQVLGRTHYKVEKSIAFQQFSPPNCESHLYNATTEHSLE

Specific function: Unknown

COG id: COG3486

COG function: function code Q; Lysine/ornithine N-monooxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lysine N(6)-hydroxylase/L-ornithine N(5)-oxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51314; Mature: 51314

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKNIYDILGVGIGPFNLSLAALSSSVPDCKSIFLDARSHFDWHPGMMLEGTRLQTPFMS
CCCCEEEEEECCCCCCCEEHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHH
DLVTMADPTNEYSFLNYAKLNDRLYPFYIRENFFLAREEYNHYCQWACNRLSNLTFNSCV
HHHHHCCCCCCCCEEEEEECCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCHHHHE
THIDYDENEAIYCVKTQNTLLDREETYYCHHLVLGTGTQPYLPDFCSKKEPKVTHSAHYL
EEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHH
MNKAELKASTCITVVGSGQSAAEIFYDLLTDIDVEKYRLRWLTRSPRFFSLEYTKLTLEM
HHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCHHHEEEEEEECCCCEEEEEEEEEEEEE
TSPEYIDYFHQLEPEQRRVLIQKQKHLYKGINADLINDIYDLLYIKQLSHDFTVEMMTNV
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECC
SVHSLSSEQSQVTLHCLHTETQHNFELQTQHIVMATGYEYQLPQFLDGICAHLRFDSHGE
EEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
LDVQRNYSVDRNNKIFVQNVGLHTHGLTSPDLGMVCYRNATILNQVLGRTHYKVEKSIAF
EEEEECCCCCCCCEEEEEECCEEECCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHH
QQFSPPNCESHLYNATTEHSLE
HCCCCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNKNIYDILGVGIGPFNLSLAALSSSVPDCKSIFLDARSHFDWHPGMMLEGTRLQTPFMS
CCCCEEEEEECCCCCCCEEHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHH
DLVTMADPTNEYSFLNYAKLNDRLYPFYIRENFFLAREEYNHYCQWACNRLSNLTFNSCV
HHHHHCCCCCCCCEEEEEECCCCEEEEEEECCEEEEHHHHHHHHHHHHHHHCCCCHHHHE
THIDYDENEAIYCVKTQNTLLDREETYYCHHLVLGTGTQPYLPDFCSKKEPKVTHSAHYL
EEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHH
MNKAELKASTCITVVGSGQSAAEIFYDLLTDIDVEKYRLRWLTRSPRFFSLEYTKLTLEM
HHHHHCCCEEEEEEEECCCHHHHHHHHHHHCCCHHHEEEEEEECCCCEEEEEEEEEEEEE
TSPEYIDYFHQLEPEQRRVLIQKQKHLYKGINADLINDIYDLLYIKQLSHDFTVEMMTNV
CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECC
SVHSLSSEQSQVTLHCLHTETQHNFELQTQHIVMATGYEYQLPQFLDGICAHLRFDSHGE
EEEECCCCCCEEEEEEEECCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCC
LDVQRNYSVDRNNKIFVQNVGLHTHGLTSPDLGMVCYRNATILNQVLGRTHYKVEKSIAF
EEEEECCCCCCCCEEEEEECCEEECCCCCCCCCEEEECCHHHHHHHHCCCHHHHHHHHHH
QQFSPPNCESHLYNATTEHSLE
HCCCCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8566764; 12910271 [H]