Click here to switch to the map view.

The map label for this gene is spo0M [H]

Identifier: 209693678

GI number: 209693678

Start: 51533

End: 52318

Strand: Direct

Name: spo0M [H]

Synonym: VSAL_I0048

Alternate gene names: 209693678

Gene position: 51533-52318 (Clockwise)

Preceding gene: 209693673

Following gene: 209693679

Centisome position: 1.55

GC content: 38.04

Gene sequence:

>786_bases
ATGTCATTTTTAAAGAAAACACTCGCATCGTTAGGAATAGGTTCTGCTAATGTAGATACAATTATTCACCATGAAGCCTT
AATTCCTGGGCAAAAAATAAAAATTACGATTGATATTACGGGTGGAGCAACGGCTCAAAGTATTGATAATATTGAGTTGA
AACTGTGTTGCCAATATAAAAAAGAAGTTGAGCGACAAGGTGAGAATAATTCACGTGAAGCAATCATCAAGCAAACCTAT
GTGCTTGCTGATTGGAGTTTGCCTTATGCGTTTACGATTAAACCTAAGCAACAGCGTCAATTTGATATTGATTTGGATCT
GCCATTAAATACACCAATTACGATTGGTGAGACAAAAGTATGGGTAGAAACGGGATTAGATATTTCTTTGGGATTAGATC
CCACCGATAAAGATCCGATAACCGTTAGACCAGATGAATTATTTGAGGGTGTATTAAGTGCGCTTGAAGGCGAAGGGTTG
CGAATTCGTCAAGTTGAATGCGAAGCGGCGAGTGGATTTGAATTGCCTTTTGTACAAGAGTTTGAATTTGTTCCATTTGA
TGGGCCTTATCATGGTCGCTGGCGTGAGCTTGAAATTATTGCTTATAGAGACAACGATAAACTCCAACTGTGGTTTGAGG
TTGATAGACAACAAAAAGGATTGTCGGGTTTATTATCTACTTTTATTGGTAGTAATGAGCTGAAACGTTATTTGGAAATA
CCATCCGATACCCCTCCGGATATTGCGGGTCAGCAAGTAATTGATTTTTTAAATCAAACCACGTAA

Upstream 100 bases:

>100_bases
GCCTATTAGTCGAGGTACATCTCAGTGTGATATTGGGATGTAGGTAATAATATTTGTATAATAAATTTGTCGATAGAACA
AAATTAATGACGGAGGGAAT

Downstream 100 bases:

>100_bases
AGCAATAAGATGTATTTTAAAGTGCCACATTTAAGCTTACAGTTGTACTCTTAAATGTGGCATACTGCTTTTATGTTGAG
TAATCACTCTATGAGAGTCC

Product: sporulation-control protein

Products: NA

Alternate protein names: Stage 0 sporulation protein M [H]

Number of amino acids: Translated: 261; Mature: 260

Protein sequence:

>261_residues
MSFLKKTLASLGIGSANVDTIIHHEALIPGQKIKITIDITGGATAQSIDNIELKLCCQYKKEVERQGENNSREAIIKQTY
VLADWSLPYAFTIKPKQQRQFDIDLDLPLNTPITIGETKVWVETGLDISLGLDPTDKDPITVRPDELFEGVLSALEGEGL
RIRQVECEAASGFELPFVQEFEFVPFDGPYHGRWRELEIIAYRDNDKLQLWFEVDRQQKGLSGLLSTFIGSNELKRYLEI
PSDTPPDIAGQQVIDFLNQTT

Sequences:

>Translated_261_residues
MSFLKKTLASLGIGSANVDTIIHHEALIPGQKIKITIDITGGATAQSIDNIELKLCCQYKKEVERQGENNSREAIIKQTY
VLADWSLPYAFTIKPKQQRQFDIDLDLPLNTPITIGETKVWVETGLDISLGLDPTDKDPITVRPDELFEGVLSALEGEGL
RIRQVECEAASGFELPFVQEFEFVPFDGPYHGRWRELEIIAYRDNDKLQLWFEVDRQQKGLSGLLSTFIGSNELKRYLEI
PSDTPPDIAGQQVIDFLNQTT
>Mature_260_residues
SFLKKTLASLGIGSANVDTIIHHEALIPGQKIKITIDITGGATAQSIDNIELKLCCQYKKEVERQGENNSREAIIKQTYV
LADWSLPYAFTIKPKQQRQFDIDLDLPLNTPITIGETKVWVETGLDISLGLDPTDKDPITVRPDELFEGVLSALEGEGLR
IRQVECEAASGFELPFVQEFEFVPFDGPYHGRWRELEIIAYRDNDKLQLWFEVDRQQKGLSGLLSTFIGSNELKRYLEIP
SDTPPDIAGQQVIDFLNQTT

Specific function: Controls the expression of spo0A and is required to pass the morphological stage 0 of sporulation [H]

COG id: COG4326

COG function: function code R; Sporulation control protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spo0M family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014756
- InterPro:   IPR009776 [H]

Pfam domain/function: PF07070 Spo0M [H]

EC number: NA

Molecular weight: Translated: 29397; Mature: 29265

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFLKKTLASLGIGSANVDTIIHHEALIPGQKIKITIDITGGATAQSIDNIELKLCCQYK
CHHHHHHHHHHCCCCCCCHHEEEHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHH
KEVERQGENNSREAIIKQTYVLADWSLPYAFTIKPKQQRQFDIDLDLPLNTPITIGETKV
HHHHHCCCCCCHHEEEEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCEEECCEEE
WVETGLDISLGLDPTDKDPITVRPDELFEGVLSALEGEGLRIRQVECEAASGFELPFVQE
EEEECCEEEECCCCCCCCCEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHC
FEFVPFDGPYHGRWRELEIIAYRDNDKLQLWFEVDRQQKGLSGLLSTFIGSNELKRYLEI
EEEECCCCCCCCCEEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCC
PSDTPPDIAGQQVIDFLNQTT
CCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
SFLKKTLASLGIGSANVDTIIHHEALIPGQKIKITIDITGGATAQSIDNIELKLCCQYK
HHHHHHHHHHCCCCCCCHHEEEHHHCCCCCEEEEEEEECCCCCCCCCCCCEEEEEHHHH
KEVERQGENNSREAIIKQTYVLADWSLPYAFTIKPKQQRQFDIDLDLPLNTPITIGETKV
HHHHHCCCCCCHHEEEEEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCCEEECCEEE
WVETGLDISLGLDPTDKDPITVRPDELFEGVLSALEGEGLRIRQVECEAASGFELPFVQE
EEEECCEEEECCCCCCCCCEEECHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHC
FEFVPFDGPYHGRWRELEIIAYRDNDKLQLWFEVDRQQKGLSGLLSTFIGSNELKRYLEI
EEEECCCCCCCCCEEEEEEEEEECCCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHCC
PSDTPPDIAGQQVIDFLNQTT
CCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9795118; 9202460; 9384377 [H]