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The map label for this gene is yhgA [C]

Identifier: 209693670

GI number: 209693670

Start: 41289

End: 42239

Strand: Direct

Name: yhgA [C]

Synonym: VSAL_I0039

Alternate gene names: 209693670

Gene position: 41289-42239 (Clockwise)

Preceding gene: 209693669

Following gene: 209693671

Centisome position: 1.24

GC content: 40.69

Gene sequence:

>951_bases
ATGAATAAAAAAAACACATCGACACCCCATGACGGGTTGTTTAAAGCCTTTTTAAGCAAGCCTGATACCGCTAAAGATAT
GCTGGAAACCCATTTACCAGCACATCTTCAAACGTTGTGTGACTTATCGACCTTGAAACTGGAGTCAGGCACGTTTTTAG
AAGACGACTTACGTCCGTACTATTCAGACGTGCTCTATTCAATGAAGACAGAATGTGGTGATGGGTACATTTATGCGTTA
ATCGAGCACCAAAGTAGCCCAGACGAACACATGGCCTTTCGGATGTTCAGATATGCTATTGCAGCAATGCAAAAGCATCT
TGACGCTGGAAACAAAGAGCTGCCATTGGTTGTTCCACTTCTGTTTTACCACGGTAAAACATCACCGTATCCATACAGCA
TGAATTGGTTGGATTGTTTTACTAACCCAGACATGGCGAAAATACTCTACAGTAATAATTTTCCATTGGTGGATGTTACT
GTGATGGATGACAGCGAGATAATGCAACACAAACGAATTGCGTTATTAGAGTTGGTTCAGAAGCACATTTACCAAAAAGA
CATCATAGAAATAATCAAACCGTTAGCCATTTTACTATCAAATGATTATCATACAGACAGCCAAATCCGAACCCTGATTG
AATACTTAGTAACGGTAGGGGAAAGCCAGAACGTAAGTACGTTGTTGGAAGAGTTGGCACAACAAGTACCAAAACATGAG
GGCGTACTAATGACAATAGCCGAGCAACTAATTCAACAAGGCGAGCAAAAAGGGCTTTTACGAGGCGAACAGACAGGGCT
AAAAAAAGGACTTGAAAAAGGACTTGAAAAAGGTCGCCAAGATACATTAAATGAAATGGCTCGTAACTTATTGCAATCAG
GTGTAGATAAAGACGTGATCATGAAAGCGACAGGATTTAGCTCTCGTGAATTAGAGCTTCTTTCGCATTAA

Upstream 100 bases:

>100_bases
ATGGATCTGAAAAAATAAAAAACCTCGATATTGCACAACATTATTATCCTATTCGATTAATGGTATACTTCACTTAATCA
GTAAAGTGGATCACTTCTTT

Downstream 100 bases:

>100_bases
TAGAACGTATAAATTCAGGACGGGGGTTAGTTTCCCCGTCCTATTTCATACTATTTCTAACTCTTTTTACAAGTATGAGT
CATTTGGTTTCTAATTTAGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNKKNTSTPHDGLFKAFLSKPDTAKDMLETHLPAHLQTLCDLSTLKLESGTFLEDDLRPYYSDVLYSMKTECGDGYIYAL
IEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTNPDMAKILYSNNFPLVDVT
VMDDSEIMQHKRIALLELVQKHIYQKDIIEIIKPLAILLSNDYHTDSQIRTLIEYLVTVGESQNVSTLLEELAQQVPKHE
GVLMTIAEQLIQQGEQKGLLRGEQTGLKKGLEKGLEKGRQDTLNEMARNLLQSGVDKDVIMKATGFSSRELELLSH

Sequences:

>Translated_316_residues
MNKKNTSTPHDGLFKAFLSKPDTAKDMLETHLPAHLQTLCDLSTLKLESGTFLEDDLRPYYSDVLYSMKTECGDGYIYAL
IEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTNPDMAKILYSNNFPLVDVT
VMDDSEIMQHKRIALLELVQKHIYQKDIIEIIKPLAILLSNDYHTDSQIRTLIEYLVTVGESQNVSTLLEELAQQVPKHE
GVLMTIAEQLIQQGEQKGLLRGEQTGLKKGLEKGLEKGRQDTLNEMARNLLQSGVDKDVIMKATGFSSRELELLSH
>Mature_316_residues
MNKKNTSTPHDGLFKAFLSKPDTAKDMLETHLPAHLQTLCDLSTLKLESGTFLEDDLRPYYSDVLYSMKTECGDGYIYAL
IEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKELPLVVPLLFYHGKTSPYPYSMNWLDCFTNPDMAKILYSNNFPLVDVT
VMDDSEIMQHKRIALLELVQKHIYQKDIIEIIKPLAILLSNDYHTDSQIRTLIEYLVTVGESQNVSTLLEELAQQVPKHE
GVLMTIAEQLIQQGEQKGLLRGEQTGLKKGLEKGLEKGRQDTLNEMARNLLQSGVDKDVIMKATGFSSRELELLSH

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1789816, Length=315, Percent_Identity=53.015873015873, Blast_Score=340, Evalue=5e-95,
Organism=Escherichia coli, GI1788643, Length=316, Percent_Identity=47.7848101265823, Blast_Score=315, Evalue=2e-87,
Organism=Escherichia coli, GI1788577, Length=311, Percent_Identity=46.6237942122186, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI1786324, Length=307, Percent_Identity=42.3452768729642, Blast_Score=269, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 35921; Mature: 35921

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKNTSTPHDGLFKAFLSKPDTAKDMLETHLPAHLQTLCDLSTLKLESGTFLEDDLRPY
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCHHHHHHH
YSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKELPLVVPL
HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LFYHGKTSPYPYSMNWLDCFTNPDMAKILYSNNFPLVDVTVMDDSEIMQHKRIALLELVQ
HHHCCCCCCCCCCCCHHHHCCCCCHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIYQKDIIEIIKPLAILLSNDYHTDSQIRTLIEYLVTVGESQNVSTLLEELAQQVPKHE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GVLMTIAEQLIQQGEQKGLLRGEQTGLKKGLEKGLEKGRQDTLNEMARNLLQSGVDKDVI
CHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHE
MKATGFSSRELELLSH
EEECCCCCCHHHHHCC
>Mature Secondary Structure
MNKKNTSTPHDGLFKAFLSKPDTAKDMLETHLPAHLQTLCDLSTLKLESGTFLEDDLRPY
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHEECCCCCCHHHHHHH
YSDVLYSMKTECGDGYIYALIEHQSSPDEHMAFRMFRYAIAAMQKHLDAGNKELPLVVPL
HHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LFYHGKTSPYPYSMNWLDCFTNPDMAKILYSNNFPLVDVTVMDDSEIMQHKRIALLELVQ
HHHCCCCCCCCCCCCHHHHCCCCCHHHHEECCCCCEEEEEECCCHHHHHHHHHHHHHHHH
KHIYQKDIIEIIKPLAILLSNDYHTDSQIRTLIEYLVTVGESQNVSTLLEELAQQVPKHE
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
GVLMTIAEQLIQQGEQKGLLRGEQTGLKKGLEKGLEKGRQDTLNEMARNLLQSGVDKDVI
CHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHE
MKATGFSSRELELLSH
EEECCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]