| Definition | Aliivibrio salmonicida LFI1238 chromosome 1, complete genome. |
|---|---|
| Accession | NC_011312 |
| Length | 3,325,165 |
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The map label for this gene is 209693659
Identifier: 209693659
GI number: 209693659
Start: 27776
End: 28180
Strand: Direct
Name: 209693659
Synonym: VSAL_I0026
Alternate gene names: NA
Gene position: 27776-28180 (Clockwise)
Preceding gene: 209693658
Following gene: 209693660
Centisome position: 0.84
GC content: 36.05
Gene sequence:
>405_bases ATGGAAGTATTAGCTCGATTTTCATTTCCGCATGAAGCTCACATAGCCAAAGCAAGTCTTGAGGCTGCTGGGATCGGAAG TGTGATTGCTGATGAACATACTGTGAATGCTCAATGGTTGTATTCTAATGCAGTTGGAGGTGTTCGATTAATGGTTAATG AAGCTGATGTTGAAATGGCATTATCAATCATAAATACGGATTTCTCAGAAGCGGTTATAAATAGTCCTGAAACTGAAATA ATAAAAAATTGTTGTCCTAATTGCGGCAGTGAGGATTTAGTTCTATTCACCAAGGGTAAAAAACCAGCATTTGTTGTTTT TATTCTTCTTGGTTTTCCATTATTTTTCTTTAAGCATGGTTATAAGTGTCAAGGCTGTAATGAGTTCATCCAAAAAGTTG AGTAA
Upstream 100 bases:
>100_bases GAGGATCAAATAGGAAAGCCTATAGTTCTTGGAAGTGTTAATAATGAAAAATTCACGTTCACTTTAAAATAGAGTGTTAA TGTATCGTTGAAGATTAATA
Downstream 100 bases:
>100_bases CGGTATAACAAGCTCATGATCACGTTTTAATTCAAATATAGCTAAAATGAGTCATAACTTCATTGTCATGTGACATTAAG GTATACCCTAATGTCACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMALSIINTDFSEAVINSPETEI IKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHGYKCQGCNEFIQKVE
Sequences:
>Translated_134_residues MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMALSIINTDFSEAVINSPETEI IKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHGYKCQGCNEFIQKVE >Mature_134_residues MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMALSIINTDFSEAVINSPETEI IKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHGYKCQGCNEFIQKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14729; Mature: 14729
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMA CCCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCEEEEECCCCCCEEEEEECCCHHHH LSIINTDFSEAVINSPETEIIKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHG HHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC YKCQGCNEFIQKVE CCCCCHHHHHHHCC >Mature Secondary Structure MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMA CCCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCEEEEECCCCCCEEEEEECCCHHHH LSIINTDFSEAVINSPETEIIKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHG HHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC YKCQGCNEFIQKVE CCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA