Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209693659

Identifier: 209693659

GI number: 209693659

Start: 27776

End: 28180

Strand: Direct

Name: 209693659

Synonym: VSAL_I0026

Alternate gene names: NA

Gene position: 27776-28180 (Clockwise)

Preceding gene: 209693658

Following gene: 209693660

Centisome position: 0.84

GC content: 36.05

Gene sequence:

>405_bases
ATGGAAGTATTAGCTCGATTTTCATTTCCGCATGAAGCTCACATAGCCAAAGCAAGTCTTGAGGCTGCTGGGATCGGAAG
TGTGATTGCTGATGAACATACTGTGAATGCTCAATGGTTGTATTCTAATGCAGTTGGAGGTGTTCGATTAATGGTTAATG
AAGCTGATGTTGAAATGGCATTATCAATCATAAATACGGATTTCTCAGAAGCGGTTATAAATAGTCCTGAAACTGAAATA
ATAAAAAATTGTTGTCCTAATTGCGGCAGTGAGGATTTAGTTCTATTCACCAAGGGTAAAAAACCAGCATTTGTTGTTTT
TATTCTTCTTGGTTTTCCATTATTTTTCTTTAAGCATGGTTATAAGTGTCAAGGCTGTAATGAGTTCATCCAAAAAGTTG
AGTAA

Upstream 100 bases:

>100_bases
GAGGATCAAATAGGAAAGCCTATAGTTCTTGGAAGTGTTAATAATGAAAAATTCACGTTCACTTTAAAATAGAGTGTTAA
TGTATCGTTGAAGATTAATA

Downstream 100 bases:

>100_bases
CGGTATAACAAGCTCATGATCACGTTTTAATTCAAATATAGCTAAAATGAGTCATAACTTCATTGTCATGTGACATTAAG
GTATACCCTAATGTCACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMALSIINTDFSEAVINSPETEI
IKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHGYKCQGCNEFIQKVE

Sequences:

>Translated_134_residues
MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMALSIINTDFSEAVINSPETEI
IKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHGYKCQGCNEFIQKVE
>Mature_134_residues
MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMALSIINTDFSEAVINSPETEI
IKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHGYKCQGCNEFIQKVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14729; Mature: 14729

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMA
CCCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCEEEEECCCCCCEEEEEECCCHHHH
LSIINTDFSEAVINSPETEIIKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHG
HHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
YKCQGCNEFIQKVE
CCCCCHHHHHHHCC
>Mature Secondary Structure
MEVLARFSFPHEAHIAKASLEAAGIGSVIADEHTVNAQWLYSNAVGGVRLMVNEADVEMA
CCCCCCCCCCCHHHHHHHHHCCCCCCCHHCCCCCCCEEEEECCCCCCEEEEEECCCHHHH
LSIINTDFSEAVINSPETEIIKNCCPNCGSEDLVLFTKGKKPAFVVFILLGFPLFFFKHG
HHHHCCCHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCC
YKCQGCNEFIQKVE
CCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA