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The map label for this gene is trcF

Identifier: 209558593

GI number:

Start: 5321

End: 8740

Strand: Direct

Name: trcF

Synonym: Spy49_0006

Alternate gene names: NA

Gene position: NA

Preceding gene: 209558592

Following gene: 209558594

Centisome position: NA

GC content: NA

Gene sequence:

>3420_bases
ATGGGGTTATCGGGTTCAAGTAAAGCATTGGCTATAGCTTCCGCTTATTTAGATGATCAAAAAAAAATAGTTGTGGTTAC
ATCAACTCAAAATGAGGTTGAAAAATTAGCCAGCGATTTATCTAGTTTACTTGATGAAGAACTTGTTTTCCAATTTTTTG
CAGACGATGTGGCTGCAGCGGAATTTATCTTTGCGTCAATGGATAAAGCTCTATCAAGAATAGAAACCCTGCAATTTTTA
AGGAATCCTAAATCTCAGGGCGTTTTAATTGTTAGTTTATCAGGCTTAAGAACTTTATTGCCAAACCCAGATGTTTTTAC
AAAGAGTCAGATTCAACTAACAGTTGGAGAAAATTATGATAGTGATACTCTTACTAAACAACTGATGACAATTGGATATC
AGAAGGTCTCACAGGTTATTAGTCCGGGAGAATTTAGCCGTCGAGGGGATATTTTAGATATCTATGAGATTACACAAGAA
TTGCCTTATCGATTGGAATTTTTTGGTGATGATATTGATAGTATTAGGCAATTTCATCCAGAAACTCAAAAATCTTTTGA
ACAACTAGAAGGTATTTTTATTAATCCAGCAAGTGATCTTATTTTTGAGGCTAGTGATTTTCAACGTGGCATTGAGCAAT
TAGAAAAGGCTCTACAAACAGCACAAGATGATAAAAAATCTTATTTAGAAGATGTATTAGCTGTTTCAAAAAACGGTTTT
AAACATAAGGATATCCGTAAATTTCAATCATTATTTTATGAAAAAGAGTGGTCATTATTAGATTATATTCCTAAGGGAAC
GCCAATCTTTTTTGATGATTTTCAAAAACTAGTTGATAAAAATGCAAGATTTGATTTAGAGATTGCTAATCTCTTGACAG
AAGATTTACAGCAAGGAAAGGCTCTTTCCAATCTTAACTACTTTACAGATAATTATCGAGAGCTTAGGCACTATAAGCCA
GCGACCTTCTTTTCAAATTTTCATAAGGGACTTGGAAATATCAAATTTGATCAGATGCATCAGCTAACTCAGTATGCCAT
GCAGGAATTTTTTAATCAATTTCCTTTGTTGATTGATGAGATTAAACGGTATCAAAAAAATCAAACAACGGTTATTGTAC
AGGTAGAGTCTCAGTATGCTTACGAACGACTTGAAAAATCTTTTCAAGATTACCAATTTCGCCTTCCTTTAGTGAGTGCT
AATCAAATTGTTTCACGTGAATCACAAATTGTAATTGGAGCTATCTCCAGTGGTTTTTATTTTGCTGATGAAAAGTTAGC
GTTAATCACAGAGCGTGAAATTTATCATAAAAAGATCAAACGACGCGCTAGACGATCTAATATTAGCAATGCTGAGCGTT
TGAAAGATTACAATGAGTTAGCAGTAGGTGATTACGTGGTTCATAATGTCCATGGTATCGGTCGCTTTCTTGGAATTGAA
ACGATTCAGATTCAGGGAATCCATCGAGATTATGTTACTATTCAATATCAAAATTCAGACCGTATTTCTCTTCCAATTGA
CCAAATTGGTAGCTTATCAAAGTACGTTTCTGCTGATGGAAAAGAACCTAAAATTAATAAACTCAATGATGGTCGTTTTC
AAAAGACAAAGCAAAAGGTCGCTAGACAAGTAGAGGATATTGCTGATGACCTTCTAAAATTATATGCTGAAAGAAGTCAG
CAAAAAGGATTTTCATTTTCACCAGATGATGACTTGCAGCGCGCTTTTGATGATGATTTTGCTTTTGTAGAAACAGAAGA
TCAACTTAGGTCTATAAAGGAAATTAAAGCTGATATGGAGAGCATGCAGCCTATGGATCGTCTTTTAGTAGGCGATGTAG
GATTTGGTAAGACAGAAGTAGCTATGAGGGCAGCCTTTAAAGCGGTGAATGATCACAAACAAGTAGCTGTCTTAGTTCCA
ACCACAGTCTTGGCCCAGCAGCATTATGAAAACTTCAAAGCACGCTTTGAAAATTACCCTGTTGAGGTTGACGTCTTAAG
TCGTTTCCGTAGTAAAAAAGAGCAAGCTGAAACACTAGAACGTGTACGAAAAGGTCAAATTGACATTATTATCGGAACCC
ATCGACTCCTATCAAAAGATGTGGTCTTTTCTGATTTAGGATTGATTGTGATTGATGAGGAACAACGGTTTGGTGTTAAG
CATAAAGAAACTTTAAAGGAATTAAAAACTAAGGTTGACGTCTTAACCTTAACAGCTACTCCGATTCCTAGAACCTTACA
CATGTCTATGTTAGGTATCCGAGATTTATCGGTTATTGAGACCCCACCAACCAATCGTTATCCTGTTCAAACCTATGTTT
TGGAAAATAATCCAGGTCTCGTTAGAGAAGCTATCATTCGTGAAATGGATCGTGGAGGACAAATTTTTTACGTTTACAAT
AAAGTTGACACTATTGAAAAGAAAGTTGCAGAGCTACAAGAATTAGTCCCAGAAGCTTCTATAGGTTTTGTTCATGGGCA
AATGAGTGAAATTCAACTTGAAAATACCTTGATTGACTTTATAAATGGTGATTATGATGTCCTTGTGGCTACAACGATCA
TCGAAACAGGAGTTGACATTTCTAATGTAAACACTTTGTTTATTGAGAATGCTGATCATATGGGATTGTCAACTTTATAT
CAACTACGAGGTCGTGTAGGAAGAAGTAATCGTATTGCCTATGCTTACCTGATGTATCGTCCTGATAAGATCCTAACAGA
AGTCTCTGAAAAACGTTTAGAGGCTATTAAAGGCTTTACTGAATTAGGTTCAGGCTTCAAGATTGCTATGCGAGATTTGT
CTATACGAGGAGCAGGTAATATTTTAGGAGCTTCTCAAAGTGGCTTTATTGATTCGGTCGGTTTTGAAATGTATTCTCAG
TTATTGGAACAGGCTATTGCTAGCAAGCAAGGAAAAACGACTGTTCGCCAAAAAGGGAATACTGAAATCAATCTTCAGAT
TGATGCCTATTTACCAGATGATTATATTGCAGATGAGCGCCAAAAAATTGACATTTACAAGCGTATTCGAGAAATTCAAT
CAAGAGAAGATTATCTCAATTTGCAAGATGAGCTTATGGATCGTTTTGGAGAGTATCCTGATCAAGTTGCCTATTTGTTA
GAGATAGCTCTGCTAAAACATTATATGGACAATGCCTTTGCGGAATTAGTTGAACGCAAAAATAATCAGGTCATTGTTCG
ATTTGAAGTAACTTCTTTAACTTATTTCTTGACTCAGGATTATTTCGAAGCCTTATCGAAAACCCATCTTAAAGCTAAAA
TTAGTGAACATCAGGGGAAAATCGATATCGTCTTTGACGTTCGCCATCAAAAAGATTATAGAATTTTAGAAGAATTGATG
TTATTTGGAGAAATGCTTAGTGAGATAAAAATCAGAAAAAACAATTCAGTTTTTAAATAA

Upstream 100 bases:

>100_bases
AATTTAATGGATAATCATGGATATTTTAGAATTATTTAGTCAGAATAAGAAAGTCCAATCCTGGCACTCTGGATTAACCA
CCTTAGGAAGACAACTGGTA

Downstream 100 bases:

>100_bases
TAATTTGAAACAACTTTTAGACTGAATAGTATTAATGACAATGGAACGAACTAGCTCTTTATACTTTTGTCAAAAATCTA
AGATCTTTGCTGCGAAATTA

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1139_residues
MGLSGSSKALAIASAYLDDQKKIVVVTSTQNEVEKLASDLSSLLDEELVFQFFADDVAAAEFIFASMDKALSRIETLQFL
RNPKSQGVLIVSLSGLRTLLPNPDVFTKSQIQLTVGENYDSDTLTKQLMTIGYQKVSQVISPGEFSRRGDILDIYEITQE
LPYRLEFFGDDIDSIRQFHPETQKSFEQLEGIFINPASDLIFEASDFQRGIEQLEKALQTAQDDKKSYLEDVLAVSKNGF
KHKDIRKFQSLFYEKEWSLLDYIPKGTPIFFDDFQKLVDKNARFDLEIANLLTEDLQQGKALSNLNYFTDNYRELRHYKP
ATFFSNFHKGLGNIKFDQMHQLTQYAMQEFFNQFPLLIDEIKRYQKNQTTVIVQVESQYAYERLEKSFQDYQFRLPLVSA
NQIVSRESQIVIGAISSGFYFADEKLALITEREIYHKKIKRRARRSNISNAERLKDYNELAVGDYVVHNVHGIGRFLGIE
TIQIQGIHRDYVTIQYQNSDRISLPIDQIGSLSKYVSADGKEPKINKLNDGRFQKTKQKVARQVEDIADDLLKLYAERSQ
QKGFSFSPDDDLQRAFDDDFAFVETEDQLRSIKEIKADMESMQPMDRLLVGDVGFGKTEVAMRAAFKAVNDHKQVAVLVP
TTVLAQQHYENFKARFENYPVEVDVLSRFRSKKEQAETLERVRKGQIDIIIGTHRLLSKDVVFSDLGLIVIDEEQRFGVK
HKETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTYVLENNPGLVREAIIREMDRGGQIFYVYN
KVDTIEKKVAELQELVPEASIGFVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFIENADHMGLSTLY
QLRGRVGRSNRIAYAYLMYRPDKILTEVSEKRLEAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQ
LLEQAIASKQGKTTVRQKGNTEINLQIDAYLPDDYIADERQKIDIYKRIREIQSREDYLNLQDELMDRFGEYPDQVAYLL
EIALLKHYMDNAFAELVERKNNQVIVRFEVTSLTYFLTQDYFEALSKTHLKAKISEHQGKIDIVFDVRHQKDYRILEELM
LFGEMLSEIKIRKNNSVFK

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA