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The map label for this gene is amiD [H]

Identifier: 209554631

GI number: 209554631

Start: 789616

End: 790614

Strand: Reverse

Name: amiD [H]

Synonym: UUR10_0657

Alternate gene names: 209554631

Gene position: 790614-789616 (Counterclockwise)

Preceding gene: 209554414

Following gene: 209554479

Centisome position: 90.41

GC content: 32.03

Gene sequence:

>999_bases
ATGGCTAAGTTTGGACAATATTTAAAAGAAAAATCAAAAAGTCTTGCTTCATCATTTGTTGATGAACTAGCTTCTGATGC
ACCAAATAAATTTTTACAACCTTTTCAACATCAACAATGAAAAATTATTGGTCATTTAATTGAATTTAGAGATAATACAT
ACATGGGTGGTCGTCCACGTCCATTCCGTGAATTTGCTAATCGTTACGGGCGTTCTTTTTCAGGATTAATTGGATTAGCA
ATTATTATTATTTTATTTATATTAGCAATTATTATTCCTTTTACAACAGGATCACCAACTGAACTTCGTCCTAATCAACG
TTATTTAGATTATTTTACAGATGGCTTCATCTTTGGGACTGATAATAATGGACGTGATCTATGAGCGATGTTATGATGAG
GGTTACGTTATTCATTAGGGATTGCGATCATTGTAACAGCTATTGAATTAGTTGTTGGGGTAACCTTAGGAATCTTAATG
GGTTATTTTGAAATGTTTGATAAGATTATGACTTTCATTATTAAAATCTTAACAAACGTTCCAACCATTATTATCTTAAT
GATCTTAACAATTATTCTAAAACCATCATTTGGAGTAATGATCTTTGCGATTTCATTCTCAGGGTGGATTACAATGGCGA
ACCAAATGCGTTCACAAGTAAAACGTGCTCGTAGTTTCTTATGAGTAGCTGCTTCAAAAACATTGGGAACAAAAGCATGA
AGAATCATTTGAAATTTCTTACCAATTTTAGTACCAATGATGATTACACAATTAGTGTTTAGTATACCAGGGGCAATTTT
AGCTGAATCATCACTTGCTTTCATTGGTTTATCATTACCAAATACACCAACATTAGGTAACTTAATTGCTGATGGTTCAT
CAATTATTACTTTATATCCAAGATTTACTTTAATTCCATCATTTTTACTAGTTTGCTTAGTTGCTTCAATTCAATTAGTT
GGGGGTGCCACACAAGACGCATTAAGACGTCAAAGATAA

Upstream 100 bases:

>100_bases
GTAATTATTTATTCATTAATTACAATTATTGGTTATACAATTCGGGATGCTTTATATCAAATTATTGACCCACGTATTAG
AAGAGGAGGAAAATAGGCTT

Downstream 100 bases:

>100_bases
TTTATGAAACCAAAAAACAATCGATATACTTATATTAAATATCTTCGTAGTCAACGTGCTTTTGTTCAAGCATTAAAACC
ACAAGTTTTAGTAGAACCAA

Product: oligopeptide transport system permease protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 331

Protein sequence:

>332_residues
MAKFGQYLKEKSKSLASSFVDELASDAPNKFLQPFQHQQWKIIGHLIEFRDNTYMGGRPRPFREFANRYGRSFSGLIGLA
IIIILFILAIIIPFTTGSPTELRPNQRYLDYFTDGFIFGTDNNGRDLWAMLWWGLRYSLGIAIIVTAIELVVGVTLGILM
GYFEMFDKIMTFIIKILTNVPTIIILMILTIILKPSFGVMIFAISFSGWITMANQMRSQVKRARSFLWVAASKTLGTKAW
RIIWNFLPILVPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLIPSFLLVCLVASIQLV
GGATQDALRRQR

Sequences:

>Translated_332_residues
MAKFGQYLKEKSKSLASSFVDELASDAPNKFLQPFQHQQ*KIIGHLIEFRDNTYMGGRPRPFREFANRYGRSFSGLIGLA
IIIILFILAIIIPFTTGSPTELRPNQRYLDYFTDGFIFGTDNNGRDL*AML**GLRYSLGIAIIVTAIELVVGVTLGILM
GYFEMFDKIMTFIIKILTNVPTIIILMILTIILKPSFGVMIFAISFSGWITMANQMRSQVKRARSFL*VAASKTLGTKA*
RII*NFLPILVPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLIPSFLLVCLVASIQLV
GGATQDALRRQR
>Mature_331_residues
AKFGQYLKEKSKSLASSFVDELASDAPNKFLQPFQHQQ*KIIGHLIEFRDNTYMGGRPRPFREFANRYGRSFSGLIGLAI
IIILFILAIIIPFTTGSPTELRPNQRYLDYFTDGFIFGTDNNGRDL*AML**GLRYSLGIAIIVTAIELVVGVTLGILMG
YFEMFDKIMTFIIKILTNVPTIIILMILTIILKPSFGVMIFAISFSGWITMANQMRSQVKRARSFL*VAASKTLGTKA*R
II*NFLPILVPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLIPSFLLVCLVASIQLVG
GATQDALRRQR

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788505, Length=244, Percent_Identity=28.6885245901639, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787054, Length=277, Percent_Identity=23.826714801444, Blast_Score=78, Evalue=7e-16,
Organism=Escherichia coli, GI1787760, Length=254, Percent_Identity=28.3464566929134, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787498, Length=220, Percent_Identity=30, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35862; Mature: 35731

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKFGQYLKEKSKSLASSFVDELASDAPNKFLQPFQHQQKIIGHLIEFRDNTYMGGRPRP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FREFANRYGRSFSGLIGLAIIIILFILAIIIPFTTGSPTELRPNQRYLDYFTDGFIFGTD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECC
NNGRDLAMLGLRYSLGIAIIVTAIELVVGVTLGILMGYFEMFDKIMTFIIKILTNVPTII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ILMILTIILKPSFGVMIFAISFSGWITMANQMRSQVKRARSFLVAASKTLGTKARIINFL
HHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
PILVPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLIPS
HHHHHHHHHHHHHHCCHHHHHCCCHHEEEECCCCCCCHHHHHCCCCCEEEECHHHHHHHH
FLLVCLVASIQLVGGATQDALRRQR
HHHHHHHHHHHHHCCCCHHHHHCCC
>Mature Secondary Structure 
AKFGQYLKEKSKSLASSFVDELASDAPNKFLQPFQHQQKIIGHLIEFRDNTYMGGRPRP
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
FREFANRYGRSFSGLIGLAIIIILFILAIIIPFTTGSPTELRPNQRYLDYFTDGFIFGTD
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEECC
NNGRDLAMLGLRYSLGIAIIVTAIELVVGVTLGILMGYFEMFDKIMTFIIKILTNVPTII
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
ILMILTIILKPSFGVMIFAISFSGWITMANQMRSQVKRARSFLVAASKTLGTKARIINFL
HHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
PILVPMMITQLVFSIPGAILAESSLAFIGLSLPNTPTLGNLIADGSSIITLYPRFTLIPS
HHHHHHHHHHHHHHCCHHHHHCCCHHEEEECCCCCCCHHHHHCCCCCEEEECHHHHHHHH
FLLVCLVASIQLVGGATQDALRRQR
HHHHHHHHHHHHHCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2352474; 11463916 [H]