| Definition | Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome. |
|---|---|
| Accession | NC_011374 |
| Length | 874,478 |
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The map label for this gene is 209554617
Identifier: 209554617
GI number: 209554617
Start: 534300
End: 535475
Strand: Reverse
Name: 209554617
Synonym: UUR10_0485
Alternate gene names: NA
Gene position: 535475-534300 (Counterclockwise)
Preceding gene: 209554048
Following gene: 209554366
Centisome position: 61.23
GC content: 22.7
Gene sequence:
>1176_bases ATGGCAGATAATAATCTTAGTGAAAAAACAAATTTTTGAACCAAAAAAAATATTTGTTTTTTATCAATTGGTTTACTAGT TTGTTTATTAATGATCATTGTTTCAATTTTATTTATTTTAGATATTGATTTTCATAATTTATTTATGAAAATTTCTAATA GCTTAAAAACAATTAAATTAGCTGTTTTATGATTGTTAATTCTTATTGGTTTTAGTTTTTTTAGAGCTTTTATGTTTACA ATTATAGCAGTTTTTGATGCTTATAAAAATCAAGTTAAAATAGATTGATGAAAGTGAATTTTATATAGTTTTAGTTTAAT TTTTTTAAACGCTGTAACGCCTTTTTCTGTTGGTAGTGAGCCTTTTTCAATTTATTTTTTAAATAAAAATGGATATCATA ATTTAAAAAAAGTTTCGGCTTTATTACTTGTTTCTTCAACTTTTTATGAACTAGGACAAGTGATAGTAACGATTCCATCA TTTATTTATGTTAATTATGAGTTAATAACTTATGCAGTTGAAAATAAAACAGCTTTACCATTTTATTATTATTTAGCTGT TGTTGGTGTTATTGTTGATTTGTGTATGACTGGTGTTTATTTTATTTTAGGCTTTTCTAAAAAATTACATTTTAATTTAG CATTGGTTTTTAATTGAGTTAAAAAAATTTTAAAATTCAAGTATTTATCAAAAGCTGAATTAATTCAAAAAAGCGATGAA AACACTAGTTTTAAAGCTATTTATTTAATTTATTTTAAAAATTTACGTGTTTCATTAGTTGCATTTATTATTGGGATAGT ATATAACGTTGCTATTTATGCGTTAATGTATATTTCATATCGTTTAATTGAATCTAATCCCCACAATGTCTTTTTTGATT TGTTTAATTACACTAACGTTGCAGTAACAGCAACCAATTTCGTTCCTCTACCAGGTTCTGAAGGCTCAATTCAATACATG TTGCGAATTTTTTTAGCAAATGATCAACATCAAATTCGTTATGCAATGAATTATTTATCAACTCAAGATGTTAATAATAT TATTTTTATTTGACGAGCGTTTAGTATTTATTTAGGTAGTTTTATTGGCATGTTTGGTTTTGGTTATTTTTTAGTTACTG ATTTATATAAATTTATTAAAAAAGCTAAAGTTAATAAAAAAATATCAAAATCATAA
Upstream 100 bases:
>100_bases GTTTTAATCATTTTTTAGAAGGGAAATTATCCCTTCTATTTTTTTTTAGTTTATTAATAAATTATATAATTTTAATAGTT ATAATAAAGGTCTTTAAAAA
Downstream 100 bases:
>100_bases ATTTTTTACTAACTCTTTAATGAGGTGGTTATAAAATGAACTATTTGGTTTTTAAAGTTATTTATGCGAATGCAAACGTT GTTATTGGTGAACACAATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MADNNLSEKTNFWTKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLAVLWLLILIGFSFFRAFMFT IIAVFDAYKNQVKIDWWKWILYSFSLIFLNAVTPFSVGSEPFSIYFLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPS FIYVNYELITYAVENKTALPFYYYLAVVGVIVDLCMTGVYFILGFSKKLHFNLALVFNWVKKILKFKYLSKAELIQKSDE NTSFKAIYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATNFVPLPGSEGSIQYM LRIFLANDQHQIRYAMNYLSTQDVNNIIFIWRAFSIYLGSFIGMFGFGYFLVTDLYKFIKKAKVNKKISKS
Sequences:
>Translated_391_residues MADNNLSEKTNF*TKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLAVL*LLILIGFSFFRAFMFT IIAVFDAYKNQVKID**K*ILYSFSLIFLNAVTPFSVGSEPFSIYFLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPS FIYVNYELITYAVENKTALPFYYYLAVVGVIVDLCMTGVYFILGFSKKLHFNLALVFN*VKKILKFKYLSKAELIQKSDE NTSFKAIYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATNFVPLPGSEGSIQYM LRIFLANDQHQIRYAMNYLSTQDVNNIIFI*RAFSIYLGSFIGMFGFGYFLVTDLYKFIKKAKVNKKISKS >Mature_390_residues ADNNLSEKTNF*TKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLAVL*LLILIGFSFFRAFMFTI IAVFDAYKNQVKID**K*ILYSFSLIFLNAVTPFSVGSEPFSIYFLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPSF IYVNYELITYAVENKTALPFYYYLAVVGVIVDLCMTGVYFILGFSKKLHFNLALVFN*VKKILKFKYLSKAELIQKSDEN TSFKAIYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATNFVPLPGSEGSIQYML RIFLANDQHQIRYAMNYLSTQDVNNIIFI*RAFSIYLGSFIGMFGFGYFLVTDLYKFIKKAKVNKKISKS
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022791 [H]
Pfam domain/function: PF03706 UPF0104 [H]
EC number: NA
Molecular weight: Translated: 43966; Mature: 43835
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNNLSEKTNFTKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLA CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHH VLLLILIGFSFFRAFMFTIIAVFDAYKNQVKIDKILYSFSLIFLNAVTPFSVGSEPFSIY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE FLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPSFIYVNYELITYAVENKTALPFYYYL EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEEEEECCCCCCHHHHHH AVVGVIVDLCMTGVYFILGFSKKLHFNLALVFNVKKILKFKYLSKAELIQKSDENTSFKA HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEE IYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATN EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEE FVPLPGSEGSIQYMLRIFLANDQHQIRYAMNYLSTQDVNNIIFIRAFSIYLGSFIGMFGF EEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHH GYFLVTDLYKFIKKAKVNKKISKS HHHHHHHHHHHHHHHHHCHHHCCC >Mature Secondary Structure ADNNLSEKTNFTKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLA CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHH VLLLILIGFSFFRAFMFTIIAVFDAYKNQVKIDKILYSFSLIFLNAVTPFSVGSEPFSIY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE FLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPSFIYVNYELITYAVENKTALPFYYYL EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEEEEECCCCCCHHHHHH AVVGVIVDLCMTGVYFILGFSKKLHFNLALVFNVKKILKFKYLSKAELIQKSDENTSFKA HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEE IYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATN EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEE FVPLPGSEGSIQYMLRIFLANDQHQIRYAMNYLSTQDVNNIIFIRAFSIYLGSFIGMFGF EEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHH GYFLVTDLYKFIKKAKVNKKISKS HHHHHHHHHHHHHHHHHCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7569993 [H]