Definition Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome.
Accession NC_011374
Length 874,478

Click here to switch to the map view.

The map label for this gene is 209554617

Identifier: 209554617

GI number: 209554617

Start: 534300

End: 535475

Strand: Reverse

Name: 209554617

Synonym: UUR10_0485

Alternate gene names: NA

Gene position: 535475-534300 (Counterclockwise)

Preceding gene: 209554048

Following gene: 209554366

Centisome position: 61.23

GC content: 22.7

Gene sequence:

>1176_bases
ATGGCAGATAATAATCTTAGTGAAAAAACAAATTTTTGAACCAAAAAAAATATTTGTTTTTTATCAATTGGTTTACTAGT
TTGTTTATTAATGATCATTGTTTCAATTTTATTTATTTTAGATATTGATTTTCATAATTTATTTATGAAAATTTCTAATA
GCTTAAAAACAATTAAATTAGCTGTTTTATGATTGTTAATTCTTATTGGTTTTAGTTTTTTTAGAGCTTTTATGTTTACA
ATTATAGCAGTTTTTGATGCTTATAAAAATCAAGTTAAAATAGATTGATGAAAGTGAATTTTATATAGTTTTAGTTTAAT
TTTTTTAAACGCTGTAACGCCTTTTTCTGTTGGTAGTGAGCCTTTTTCAATTTATTTTTTAAATAAAAATGGATATCATA
ATTTAAAAAAAGTTTCGGCTTTATTACTTGTTTCTTCAACTTTTTATGAACTAGGACAAGTGATAGTAACGATTCCATCA
TTTATTTATGTTAATTATGAGTTAATAACTTATGCAGTTGAAAATAAAACAGCTTTACCATTTTATTATTATTTAGCTGT
TGTTGGTGTTATTGTTGATTTGTGTATGACTGGTGTTTATTTTATTTTAGGCTTTTCTAAAAAATTACATTTTAATTTAG
CATTGGTTTTTAATTGAGTTAAAAAAATTTTAAAATTCAAGTATTTATCAAAAGCTGAATTAATTCAAAAAAGCGATGAA
AACACTAGTTTTAAAGCTATTTATTTAATTTATTTTAAAAATTTACGTGTTTCATTAGTTGCATTTATTATTGGGATAGT
ATATAACGTTGCTATTTATGCGTTAATGTATATTTCATATCGTTTAATTGAATCTAATCCCCACAATGTCTTTTTTGATT
TGTTTAATTACACTAACGTTGCAGTAACAGCAACCAATTTCGTTCCTCTACCAGGTTCTGAAGGCTCAATTCAATACATG
TTGCGAATTTTTTTAGCAAATGATCAACATCAAATTCGTTATGCAATGAATTATTTATCAACTCAAGATGTTAATAATAT
TATTTTTATTTGACGAGCGTTTAGTATTTATTTAGGTAGTTTTATTGGCATGTTTGGTTTTGGTTATTTTTTAGTTACTG
ATTTATATAAATTTATTAAAAAAGCTAAAGTTAATAAAAAAATATCAAAATCATAA

Upstream 100 bases:

>100_bases
GTTTTAATCATTTTTTAGAAGGGAAATTATCCCTTCTATTTTTTTTTAGTTTATTAATAAATTATATAATTTTAATAGTT
ATAATAAAGGTCTTTAAAAA

Downstream 100 bases:

>100_bases
ATTTTTTACTAACTCTTTAATGAGGTGGTTATAAAATGAACTATTTGGTTTTTAAAGTTATTTATGCGAATGCAAACGTT
GTTATTGGTGAACACAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MADNNLSEKTNFWTKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLAVLWLLILIGFSFFRAFMFT
IIAVFDAYKNQVKIDWWKWILYSFSLIFLNAVTPFSVGSEPFSIYFLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPS
FIYVNYELITYAVENKTALPFYYYLAVVGVIVDLCMTGVYFILGFSKKLHFNLALVFNWVKKILKFKYLSKAELIQKSDE
NTSFKAIYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATNFVPLPGSEGSIQYM
LRIFLANDQHQIRYAMNYLSTQDVNNIIFIWRAFSIYLGSFIGMFGFGYFLVTDLYKFIKKAKVNKKISKS

Sequences:

>Translated_391_residues
MADNNLSEKTNF*TKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLAVL*LLILIGFSFFRAFMFT
IIAVFDAYKNQVKID**K*ILYSFSLIFLNAVTPFSVGSEPFSIYFLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPS
FIYVNYELITYAVENKTALPFYYYLAVVGVIVDLCMTGVYFILGFSKKLHFNLALVFN*VKKILKFKYLSKAELIQKSDE
NTSFKAIYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATNFVPLPGSEGSIQYM
LRIFLANDQHQIRYAMNYLSTQDVNNIIFI*RAFSIYLGSFIGMFGFGYFLVTDLYKFIKKAKVNKKISKS
>Mature_390_residues
ADNNLSEKTNF*TKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLAVL*LLILIGFSFFRAFMFTI
IAVFDAYKNQVKID**K*ILYSFSLIFLNAVTPFSVGSEPFSIYFLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPSF
IYVNYELITYAVENKTALPFYYYLAVVGVIVDLCMTGVYFILGFSKKLHFNLALVFN*VKKILKFKYLSKAELIQKSDEN
TSFKAIYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATNFVPLPGSEGSIQYML
RIFLANDQHQIRYAMNYLSTQDVNNIIFI*RAFSIYLGSFIGMFGFGYFLVTDLYKFIKKAKVNKKISKS

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 43966; Mature: 43835

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNNLSEKTNFTKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLA
CCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHH
VLLLILIGFSFFRAFMFTIIAVFDAYKNQVKIDKILYSFSLIFLNAVTPFSVGSEPFSIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
FLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPSFIYVNYELITYAVENKTALPFYYYL
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEEEEECCCCCCHHHHHH
AVVGVIVDLCMTGVYFILGFSKKLHFNLALVFNVKKILKFKYLSKAELIQKSDENTSFKA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEE
IYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATN
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEE
FVPLPGSEGSIQYMLRIFLANDQHQIRYAMNYLSTQDVNNIIFIRAFSIYLGSFIGMFGF
EEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHH
GYFLVTDLYKFIKKAKVNKKISKS
HHHHHHHHHHHHHHHHHCHHHCCC
>Mature Secondary Structure 
ADNNLSEKTNFTKKNICFLSIGLLVCLLMIIVSILFILDIDFHNLFMKISNSLKTIKLA
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHH
VLLLILIGFSFFRAFMFTIIAVFDAYKNQVKIDKILYSFSLIFLNAVTPFSVGSEPFSIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
FLNKNGYHNLKKVSALLLVSSTFYELGQVIVTIPSFIYVNYELITYAVENKTALPFYYYL
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEEEEEEECCCCCCHHHHHH
AVVGVIVDLCMTGVYFILGFSKKLHFNLALVFNVKKILKFKYLSKAELIQKSDENTSFKA
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEE
IYLIYFKNLRVSLVAFIIGIVYNVAIYALMYISYRLIESNPHNVFFDLFNYTNVAVTATN
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEE
FVPLPGSEGSIQYMLRIFLANDQHQIRYAMNYLSTQDVNNIIFIRAFSIYLGSFIGMFGF
EEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHH
GYFLVTDLYKFIKKAKVNKKISKS
HHHHHHHHHHHHHHHHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]