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The map label for this gene is uvrC [H]

Identifier: 209554512

GI number: 209554512

Start: 470231

End: 471985

Strand: Reverse

Name: uvrC [H]

Synonym: UUR10_0424

Alternate gene names: 209554512

Gene position: 471985-470231 (Counterclockwise)

Preceding gene: 209554471

Following gene: 209554356

Centisome position: 53.97

GC content: 23.13

Gene sequence:

>1755_bases
ATGAATGATTTATTAAAAACTAAATTAAAATTAATTCCTCACAAACCTGGTTGTTATTTGTGAAAAGATGAATTTGATCA
AATTATTTATATTGGTAAAGCCAAAGATTTATATAATAGAACACATTCATATTTTAATGGTCCAAAAGATAATAAAACTA
GTAAATTAGTAAGTAATATTAAAGATCTTGAATACATTGTGGTTAATAATGTTAATGAAGCTTTAATTTTAGAAAATAAT
TTAATTAAAACACATCGCCCAAAATATAATATCTTACTAAAAGATGGTTCTAACTATCCTTATATCATGATTACAAACGA
ACAATATCCACGATTAAAATATGTTCGTACTTATGATAAAAATAAAGGAATTTATTTTGGTCCATTAGCTGATAGTACAA
ATAAATATCAATTATTTAACTTATTAAATAGTATATTTCCATTTAATAAATGTAATCACCAACCCCATCAAAAATGCATT
TACTATGATCTTCATCGATGCATAAATCAAGTACAACCGCAGACATATGAAAAAGCAATTGCTGAAGTTAAAGAAATTTT
TAAAGGTAATTTAGATCATATTTTAGCTATTTTAGAAAATAAAGAACAACATGCAGTTGCTAAATTAGATTTTGAAAATG
CTCAAAAATATGCTGAGCAACAAAAAGCACTTACTTATATTATTAACTCAGGTTTAGTACAATTAGATAATAATGAAAGT
TTTGATGTTGTAGGTTTTTATGAAAAAAACAATTATTTAGTAATTATTATTTTTAATTATGTTAAGGGTAAATTATTAAA
TAAAAGTGCTGATACATTTGCTATTTATGATCATGAAATTAATGAATTAATAACTTCATTTTTAATGCAATACTATTCAC
AAAATAGAATTAGTACAAAAATTATTGTGAGTTTAGATGATGATAATTTATTAGCTTTATCACAAAGATTTAAGACAAAA
TTTATTAATGCGCAAACGAAATTTCACAAACAAATTCTTAAATTAGCTTTTGATAATGCGATTTTATATTTTGATTCTAA
TATTAAGAGTGTAATTAATAAACAAAACGAATTAGATGAGGCTTTAAATCAATTAAAGCAAATTTTAAAGTTGCCAGATT
TAAGTATGATTGAGTGTTTTGATAACTCTAATATTAATTTAAGTTTACCAATTGCTGGAATGATTGTTTACCAAAATGGT
AAATTAAATAATAAATTAAATCGTAAATATAATTTAATGACAACTAAAAATGCTTCTGATTATCATTTTATGATCGAAGT
TATCACAAGACGTTATCAACGATTAGTTTCACAACATCAAAAATTACCCAATCTAATCGTAGTAGATGGAGGAAAACTAC
AAGTTAATGCAGCTTTGTATGCTTTAGAACAATTACAAATAAGTATTCCATTAATAGGATTAAAAAAAGATCAAAAACAC
AAAACTAATGCTATTGTTTTAGCTAATGGTGATGAAATTATTTTAGATCGTAAAAGTGTTTTATATAAGTTTTTAGCAAA
TATGCAAAATGATGTTCACAATTATGCCATTTCATTTTTAAGAAACAAACACACAAAATCTATTTTTAATTCTTTATTAA
ATGATGTTCAAGGTCTAGGTAAAAAGCGTTTAAATGAACTTTTAAATTATTATGATAGTATTAACGATTTAAAAAGTGCA
TCTGATCAAGAATTATTACAATTTTTACCTAAAAATGTCTTAGTTAATCTACGTGAAAAACTAAATAAAATATAA

Upstream 100 bases:

>100_bases
TTAAAACAAAGCAAATTGATGCTCCACTTTTTGAAAGTTTATACGAAGTTATTAATGAAAATCTAACACCAAAGTCTTTG
TTTAATAAAAGTTTTTGTTA

Downstream 100 bases:

>100_bases
TTATTTTTTATAAAATCAATTTTATAATGTAATGTTTTTTATCTATAATTTTTCAAAATTAATCAAAATTTTATAAAATG
TTAATTTCAATTTTTATTAA

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Protein uvrC; Excinuclease ABC subunit C [H]

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MNDLLKTKLKLIPHKPGCYLWKDEFDQIIYIGKAKDLYNRTHSYFNGPKDNKTSKLVSNIKDLEYIVVNNVNEALILENN
LIKTHRPKYNILLKDGSNYPYIMITNEQYPRLKYVRTYDKNKGIYFGPLADSTNKYQLFNLLNSIFPFNKCNHQPHQKCI
YYDLHRCINQVQPQTYEKAIAEVKEIFKGNLDHILAILENKEQHAVAKLDFENAQKYAEQQKALTYIINSGLVQLDNNES
FDVVGFYEKNNYLVIIIFNYVKGKLLNKSADTFAIYDHEINELITSFLMQYYSQNRISTKIIVSLDDDNLLALSQRFKTK
FINAQTKFHKQILKLAFDNAILYFDSNIKSVINKQNELDEALNQLKQILKLPDLSMIECFDNSNINLSLPIAGMIVYQNG
KLNNKLNRKYNLMTTKNASDYHFMIEVITRRYQRLVSQHQKLPNLIVVDGGKLQVNAALYALEQLQISIPLIGLKKDQKH
KTNAIVLANGDEIILDRKSVLYKFLANMQNDVHNYAISFLRNKHTKSIFNSLLNDVQGLGKKRLNELLNYYDSINDLKSA
SDQELLQFLPKNVLVNLREKLNKI

Sequences:

>Translated_584_residues
MNDLLKTKLKLIPHKPGCYL*KDEFDQIIYIGKAKDLYNRTHSYFNGPKDNKTSKLVSNIKDLEYIVVNNVNEALILENN
LIKTHRPKYNILLKDGSNYPYIMITNEQYPRLKYVRTYDKNKGIYFGPLADSTNKYQLFNLLNSIFPFNKCNHQPHQKCI
YYDLHRCINQVQPQTYEKAIAEVKEIFKGNLDHILAILENKEQHAVAKLDFENAQKYAEQQKALTYIINSGLVQLDNNES
FDVVGFYEKNNYLVIIIFNYVKGKLLNKSADTFAIYDHEINELITSFLMQYYSQNRISTKIIVSLDDDNLLALSQRFKTK
FINAQTKFHKQILKLAFDNAILYFDSNIKSVINKQNELDEALNQLKQILKLPDLSMIECFDNSNINLSLPIAGMIVYQNG
KLNNKLNRKYNLMTTKNASDYHFMIEVITRRYQRLVSQHQKLPNLIVVDGGKLQVNAALYALEQLQISIPLIGLKKDQKH
KTNAIVLANGDEIILDRKSVLYKFLANMQNDVHNYAISFLRNKHTKSIFNSLLNDVQGLGKKRLNELLNYYDSINDLKSA
SDQELLQFLPKNVLVNLREKLNKI
>Mature_584_residues
MNDLLKTKLKLIPHKPGCYL*KDEFDQIIYIGKAKDLYNRTHSYFNGPKDNKTSKLVSNIKDLEYIVVNNVNEALILENN
LIKTHRPKYNILLKDGSNYPYIMITNEQYPRLKYVRTYDKNKGIYFGPLADSTNKYQLFNLLNSIFPFNKCNHQPHQKCI
YYDLHRCINQVQPQTYEKAIAEVKEIFKGNLDHILAILENKEQHAVAKLDFENAQKYAEQQKALTYIINSGLVQLDNNES
FDVVGFYEKNNYLVIIIFNYVKGKLLNKSADTFAIYDHEINELITSFLMQYYSQNRISTKIIVSLDDDNLLALSQRFKTK
FINAQTKFHKQILKLAFDNAILYFDSNIKSVINKQNELDEALNQLKQILKLPDLSMIECFDNSNINLSLPIAGMIVYQNG
KLNNKLNRKYNLMTTKNASDYHFMIEVITRRYQRLVSQHQKLPNLIVVDGGKLQVNAALYALEQLQISIPLIGLKKDQKH
KTNAIVLANGDEIILDRKSVLYKFLANMQNDVHNYAISFLRNKHTKSIFNSLLNDVQGLGKKRLNELLNYYDSINDLKSA
SDQELLQFLPKNVLVNLREKLNKI

Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision [H]

COG id: COG0322

COG function: function code L; Nuclease subunit of the excinuclease complex

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UVR domain [H]

Homologues:

Organism=Escherichia coli, GI87081999, Length=597, Percent_Identity=29.8157453936348, Blast_Score=246, Evalue=2e-66,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008985
- InterPro:   IPR010994
- InterPro:   IPR004791
- InterPro:   IPR001162
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG; PF08459 UvrC_HhH_N [H]

EC number: NA

Molecular weight: Translated: 67731; Mature: 67731

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: PS50164 UVRC_1 ; PS50165 UVRC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLLKTKLKLIPHKPGCYLKDEFDQIIYIGKAKDLYNRTHSYFNGPKDNKTSKLVSNIK
CCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHH
DLEYIVVNNVNEALILENNLIKTHRPKYNILLKDGSNYPYIMITNEQYPRLKYVRTYDKN
HCEEEEEECCCCEEEEECCCEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEEEECC
KGIYFGPLADSTNKYQLFNLLNSIFPFNKCNHQPHQKCIYYDLHRCINQVQPQTYEKAIA
CCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
EVKEIFKGNLDHILAILENKEQHAVAKLDFENAQKYAEQQKALTYIINSGLVQLDNNESF
HHHHHHHCCHHHHHHHHCCCCHHHEEEECHHHHHHHHHHHHHHHHHHHCCEEEECCCCCE
DVVGFYEKNNYLVIIIFNYVKGKLLNKSADTFAIYDHEINELITSFLMQYYSQNRISTKI
EEEEEEECCCEEEEEEEECCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEE
IVSLDDDNLLALSQRFKTKFINAQTKFHKQILKLAFDNAILYFDSNIKSVINKQNELDEA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCHHHHHHH
LNQLKQILKLPDLSMIECFDNSNINLSLPIAGMIVYQNGKLNNKLNRKYNLMTTKNASDY
HHHHHHHHCCCCCCEEEEECCCCCEEEECEEEEEEEECCCCCCCCCCEEEEEEECCCCCH
HFMIEVITRRYQRLVSQHQKLPNLIVVDGGKLQVNAALYALEQLQISIPLIGLKKDQKHK
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEHHHHHHHHHHEEEEEEEECCCCCCCC
TNAIVLANGDEIILDRKSVLYKFLANMQNDVHNYAISFLRNKHTKSIFNSLLNDVQGLGK
CCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLNELLNYYDSINDLKSASDQELLQFLPKNVLVNLREKLNKI
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MNDLLKTKLKLIPHKPGCYLKDEFDQIIYIGKAKDLYNRTHSYFNGPKDNKTSKLVSNIK
CCCHHHHHHHHCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHHHH
DLEYIVVNNVNEALILENNLIKTHRPKYNILLKDGSNYPYIMITNEQYPRLKYVRTYDKN
HCEEEEEECCCCEEEEECCCEECCCCCEEEEEECCCCCCEEEEECCCCCCEEEEEEEECC
KGIYFGPLADSTNKYQLFNLLNSIFPFNKCNHQPHQKCIYYDLHRCINQVQPQTYEKAIA
CCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
EVKEIFKGNLDHILAILENKEQHAVAKLDFENAQKYAEQQKALTYIINSGLVQLDNNESF
HHHHHHHCCHHHHHHHHCCCCHHHEEEECHHHHHHHHHHHHHHHHHHHCCEEEECCCCCE
DVVGFYEKNNYLVIIIFNYVKGKLLNKSADTFAIYDHEINELITSFLMQYYSQNRISTKI
EEEEEEECCCEEEEEEEECCCCHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCEEE
IVSLDDDNLLALSQRFKTKFINAQTKFHKQILKLAFDNAILYFDSNIKSVINKQNELDEA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHCCHHHHHHH
LNQLKQILKLPDLSMIECFDNSNINLSLPIAGMIVYQNGKLNNKLNRKYNLMTTKNASDY
HHHHHHHHCCCCCCEEEEECCCCCEEEECEEEEEEEECCCCCCCCCCEEEEEEECCCCCH
HFMIEVITRRYQRLVSQHQKLPNLIVVDGGKLQVNAALYALEQLQISIPLIGLKKDQKHK
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEHHHHHHHHHHEEEEEEEECCCCCCCC
TNAIVLANGDEIILDRKSVLYKFLANMQNDVHNYAISFLRNKHTKSIFNSLLNDVQGLGK
CCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRLNELLNYYDSINDLKSASDQELLQFLPKNVLVNLREKLNKI
HHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA