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The map label for this gene is ureD [H]

Identifier: 209554456

GI number: 209554456

Start: 523988

End: 524851

Strand: Reverse

Name: ureD [H]

Synonym: UUR10_0473

Alternate gene names: 209554456

Gene position: 524851-523988 (Counterclockwise)

Preceding gene: 209554382

Following gene: 209554529

Centisome position: 60.02

GC content: 29.63

Gene sequence:

>864_bases
ATGATTTTAAGTAAAGAAAAAATTAACAATTATGCTGCTTATTTATACATTAAAGTAGCATATGATGAAGCACACAACAA
AATGGCGCATACTGTGTATTTCACTAATTTCTATCGTTCATCAAAACCACTATTTTTAGATGAAGAAGACCCAATTAATC
CCTGTTTTCAAACTATTAGTATGGGCGGGGGTTATGTATCTGGTGAAGTGTATCGTTCTGATTTTGAAGTTGAAGCAAAT
GCACGTTGCATTATTACTACGCAATCATCAGCCAAAGCTTATAAAGCAGTTGATGGTAAAACTTCAGAACAACACACAAA
TATTACATTAGGAAAAAATAGTATTTTAGAATACATAAGTGATAATGTAATTGTGTATGAAGATGGAAAATTTGCCCAAT
TTAACAATTTTAAAATGGATTCAACTGCTACACTAATTTACACAGAATGTTTTGGTCCTGGTTGATCGCCACATGGATCT
GCTTATCAATACGAAAAAATGTATTTAAATACTAAAATATATTATGACAATAAATTGGTTTTATTTGATAATTTAAAATT
TCAACCACGTAAAAATGATGAATCAGCATTTGGTATTATGGATGGTTATCACTATTGTGGAACAATGATTGTAATTAACC
AAGAAGTTGTTGAAGAAGATGTGATTAAAATTCGTGATTTAGTTAAGGAAAAATATCCCGATATGGATATGATATTTGGG
GTATCACGAATGGATATTCCTGGATTAGGATTACGAGTTTTAGCCAATACTTATTACCATGTTGAAAAAATTAATGCTGT
TGCACATGATTACTTTAGAAGAAAATTATTCAATAAAAAACCATTAATTTTACGAAAACCATAG

Upstream 100 bases:

>100_bases
CTTTGTAACAAATTTAAAAACAGATGAAGGTCTAAAATCTGTTGCTGATTGAGTTGAAAAACGTTTACAATTAGCTTTAC
TTGAAGAATAAGACTAACAA

Downstream 100 bases:

>100_bases
AAGATTTAAAAACCTTAAAAACGTACTTGTTTTTAAGGTTTTTTGTTACTAAAAAATTCTTAATAAATTTATAAAATATT
TATATAATATATATGAATTT

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MILSKEKINNYAAYLYIKVAYDEAHNKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTISMGGGYVSGEVYRSDFEVEAN
ARCIITTQSSAKAYKAVDGKTSEQHTNITLGKNSILEYISDNVIVYEDGKFAQFNNFKMDSTATLIYTECFGPGWSPHGS
AYQYEKMYLNTKIYYDNKLVLFDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQEVVEEDVIKIRDLVKEKYPDMDMIFG
VSRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP

Sequences:

>Translated_287_residues
MILSKEKINNYAAYLYIKVAYDEAHNKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTISMGGGYVSGEVYRSDFEVEAN
ARCIITTQSSAKAYKAVDGKTSEQHTNITLGKNSILEYISDNVIVYEDGKFAQFNNFKMDSTATLIYTECFGPG*SPHGS
AYQYEKMYLNTKIYYDNKLVLFDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQEVVEEDVIKIRDLVKEKYPDMDMIFG
VSRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP
>Mature_287_residues
MILSKEKINNYAAYLYIKVAYDEAHNKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTISMGGGYVSGEVYRSDFEVEAN
ARCIITTQSSAKAYKAVDGKTSEQHTNITLGKNSILEYISDNVIVYEDGKFAQFNNFKMDSTATLIYTECFGPG*SPHGS
AYQYEKMYLNTKIYYDNKLVLFDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQEVVEEDVIKIRDLVKEKYPDMDMIFG
VSRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 32956; Mature: 32956

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSKEKINNYAAYLYIKVAYDEAHNKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTIS
CCCCHHHCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCEEECCCCCCCHHHHHHH
MGGGYVSGEVYRSDFEVEANARCIITTQSSAKAYKAVDGKTSEQHTNITLGKNSILEYIS
CCCCEEECEEEECCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCEEEECHHHHHHHHC
DNVIVYEDGKFAQFNNFKMDSTATLIYTECFGPGSPHGSAYQYEKMYLNTKIYYDNKLVL
CCEEEEECCCEEEECCEEECCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCEEEE
FDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQEVVEEDVIKIRDLVKEKYPDMDMIFGV
EECCEECCCCCCCCEEEECCCHHHHCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCC
SRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MILSKEKINNYAAYLYIKVAYDEAHNKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTIS
CCCCHHHCCCEEEEEEEEEEEECCCCCEEEEEEEEEEECCCCCEEECCCCCCCHHHHHHH
MGGGYVSGEVYRSDFEVEANARCIITTQSSAKAYKAVDGKTSEQHTNITLGKNSILEYIS
CCCCEEECEEEECCEEEECCCEEEEEECCCCCEEEECCCCCCCCCCEEEECHHHHHHHHC
DNVIVYEDGKFAQFNNFKMDSTATLIYTECFGPGSPHGSAYQYEKMYLNTKIYYDNKLVL
CCEEEEECCCEEEECCEEECCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCEEEE
FDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQEVVEEDVIKIRDLVKEKYPDMDMIFGV
EECCEECCCCCCCCEEEECCCHHHHCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCC
SRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA