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The map label for this gene is ydcI [H]

Identifier: 209554449

GI number: 209554449

Start: 29863

End: 31983

Strand: Reverse

Name: ydcI [H]

Synonym: UUR10_0029

Alternate gene names: 209554449

Gene position: 31983-29863 (Counterclockwise)

Preceding gene: 209554576

Following gene: 209554213

Centisome position: 3.66

GC content: 25.7

Gene sequence:

>2121_bases
ATGATTGATTTAATTATTAAAACACTAGTTCAAAAATTAAAAATTGAAGCAAAATATATAACAAATGTTTTGGATTTGTT
AGCTGATAATAATACTATCGCTTTTATTGCTCGATATCGTAAGCATTTAACTAATAATATGGATGAATTTCAAATTCAAG
CAATTGCTCATGAATATGAATATCTTACAAAATTAAATAAGCGTAAAGAAGCAATTATTAAAAATTTAGAACAAAAAGGT
TTATTAACTGATGACTTATTAGAATCAATTAATAATTGCCAACGCCTTGTTGATCTTGAAAATCTTTATGAACCTTATGC
TTCAAATAAGAAAACAAAAGCATCAATGGCGATTGAAAAAGGACTAGAACCATTAGCATTATTAATCTTAAAAAATAATC
CTAATTGTAATATTAAAGAAGTTGCCAAACAATATTTAAATGAACAAGTTTTAAGTGTTGATGAAGCTATTGCTGGAGCT
TGTGATATTATTGCCCAAAAAGTTGCTAATGATGCAACTTTAAGACAAATGCTTTATGAAACAATTAGCAAACACGCTAA
ATTGATTACAAAAATTAATAAAATAGCAAATGACCCAACCGAAAACTTTGCTTTATATTATGAGTTTAGTTGCCCAATTA
AATATTTAAAAGCATATCAACTAATGGCTATTGATCGAGCCAATGAATTAAAAATCATTACATTTAAACTTGATTTTAAA
AAAGAATTTCTTATTGATTTTGCTATCAATAAATATACTAGAAAAAATAAAAGTGACAGTTATGATTACATTAAATTAGC
TGTTAATGATGGCTTTGATCGTTTATTAATTCCTTCAGTTTCAAATGCTGTTTACAAAGAAAAATTAGATGAAGCTCACC
AACAATCAGCACAGATTTTTAGTGATAATTTACAGCAATTATTATTGCAAAAACCTTTAAAAGACCACATTGTTTTAGGA
TTTGATCCAGGCTATGCACACGGTTGTAAATTAGCAGTTGTTGATAAAAATAATCAATTATTACACACTGATATTATTTA
TCCTCACAAACCTCAAGAATTAATTGAACAAGCCAAAAATACGTTAATATCTTTGATTAATAAATATCAAATTAATACAA
TAGCAATTGGCAATGGAACAGCATCAAATGAAAGTGTCATTTTTATTAGTGATCTAATTAAAGAATTTAAATTAAATATT
AATTATTGTGTAATTAGTGAAGATGGCGCTTCAATTTATTCAGCATCATTAATTGCAAGCGAAGAATTCCCTAATTTAAG
TGTTGAAAAACGTTCAGCAATTAGTATTGCACGAAGAATTATTGATCCTTTAGGTGAGTTAATAAAAATTGACCCAAAAA
GTATTGGTGTAGGTCAATACCAACACGATATTAACAAAAACATTCTTGAACAAAAAGTTGATTTTTGTATTGATTATTGC
GTTAATCAAGTTGGTGTTGATGTTAATACTGCTTCTATACCTTTATTATCTAAAGTATCAGGTTTAAATAAAAGAAGTGC
TAAAAAGATTTTTGAATATGTTAAAGAACATCAATCTATTAAAAGCCGTGAACAATTAAAAACTATTCCTTATGTTACTG
ATAAAGTTTTTGAACAAGCAGCAGGATTTTTAAGAATTAATAATAGCTTAAATTTTTTAGATAAAACAAGCATTCATCCA
GAATCATATGCAATTGTTAACCAATTATGTGAATATATTAAATTACCAATTAATGATTTGATAAACAATCATCAAGTTTT
AAATCAACTAAATCCAAACGATTTAACCAATGTTTTAAAAACAGATGTTTATACTATTGAAAATATTATTAATAATTTAA
AAAATCCTTTACAAGATGTTCGTGATGATTATGATATTCCTATTTTACGTTCACAAATGGTTGATATTAATGATTTAAAA
GTAGGAATGTTAGTTCAAGGAACAATTCGTAACCAAACCCAATTTGGTAGTTTTGTTGATATTGGTTTAAAAAATGACGC
ATTATTACATATTTCACACTATAGTGAACAAGATAATTTGCATGTTAATAAAAATATTAATGCTTATATTGATAAAATAG
ATACAATTGCTCAAAAAATTTCATTAAAGTTAAGACCATAG

Upstream 100 bases:

>100_bases
CTCCAATTATCTTTTATTTAGAATTATAAGGCATTTGAATTAACATAACTAATTTTGACTATCAAAAGTTTATAATTTAT
TAACTTTAGGAAGGTTTAAT

Downstream 100 bases:

>100_bases
AAATTATGAAAACAAAGTTTAAAAAAATAATTATTCTTTTTTTAGGATTGCCAGTTTTAGCAATTCCTTTTATTGTTAGT
GCTTGCTCACAACTTAAGAT

Product: protein tex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MIDLIIKTLVQKLKIEAKYITNVLDLLADNNTIAFIARYRKHLTNNMDEFQIQAIAHEYEYLTKLNKRKEAIIKNLEQKG
LLTDDLLESINNCQRLVDLENLYEPYASNKKTKASMAIEKGLEPLALLILKNNPNCNIKEVAKQYLNEQVLSVDEAIAGA
CDIIAQKVANDATLRQMLYETISKHAKLITKINKIANDPTENFALYYEFSCPIKYLKAYQLMAIDRANELKIITFKLDFK
KEFLIDFAINKYTRKNKSDSYDYIKLAVNDGFDRLLIPSVSNAVYKEKLDEAHQQSAQIFSDNLQQLLLQKPLKDHIVLG
FDPGYAHGCKLAVVDKNNQLLHTDIIYPHKPQELIEQAKNTLISLINKYQINTIAIGNGTASNESVIFISDLIKEFKLNI
NYCVISEDGASIYSASLIASEEFPNLSVEKRSAISIARRIIDPLGELIKIDPKSIGVGQYQHDINKNILEQKVDFCIDYC
VNQVGVDVNTASIPLLSKVSGLNKRSAKKIFEYVKEHQSIKSREQLKTIPYVTDKVFEQAAGFLRINNSLNFLDKTSIHP
ESYAIVNQLCEYIKLPINDLINNHQVLNQLNPNDLTNVLKTDVYTIENIINNLKNPLQDVRDDYDIPILRSQMVDINDLK
VGMLVQGTIRNQTQFGSFVDIGLKNDALLHISHYSEQDNLHVNKNINAYIDKIDTIAQKISLKLRP

Sequences:

>Translated_706_residues
MIDLIIKTLVQKLKIEAKYITNVLDLLADNNTIAFIARYRKHLTNNMDEFQIQAIAHEYEYLTKLNKRKEAIIKNLEQKG
LLTDDLLESINNCQRLVDLENLYEPYASNKKTKASMAIEKGLEPLALLILKNNPNCNIKEVAKQYLNEQVLSVDEAIAGA
CDIIAQKVANDATLRQMLYETISKHAKLITKINKIANDPTENFALYYEFSCPIKYLKAYQLMAIDRANELKIITFKLDFK
KEFLIDFAINKYTRKNKSDSYDYIKLAVNDGFDRLLIPSVSNAVYKEKLDEAHQQSAQIFSDNLQQLLLQKPLKDHIVLG
FDPGYAHGCKLAVVDKNNQLLHTDIIYPHKPQELIEQAKNTLISLINKYQINTIAIGNGTASNESVIFISDLIKEFKLNI
NYCVISEDGASIYSASLIASEEFPNLSVEKRSAISIARRIIDPLGELIKIDPKSIGVGQYQHDINKNILEQKVDFCIDYC
VNQVGVDVNTASIPLLSKVSGLNKRSAKKIFEYVKEHQSIKSREQLKTIPYVTDKVFEQAAGFLRINNSLNFLDKTSIHP
ESYAIVNQLCEYIKLPINDLINNHQVLNQLNPNDLTNVLKTDVYTIENIINNLKNPLQDVRDDYDIPILRSQMVDINDLK
VGMLVQGTIRNQTQFGSFVDIGLKNDALLHISHYSEQDNLHVNKNINAYIDKIDTIAQKISLKLRP
>Mature_706_residues
MIDLIIKTLVQKLKIEAKYITNVLDLLADNNTIAFIARYRKHLTNNMDEFQIQAIAHEYEYLTKLNKRKEAIIKNLEQKG
LLTDDLLESINNCQRLVDLENLYEPYASNKKTKASMAIEKGLEPLALLILKNNPNCNIKEVAKQYLNEQVLSVDEAIAGA
CDIIAQKVANDATLRQMLYETISKHAKLITKINKIANDPTENFALYYEFSCPIKYLKAYQLMAIDRANELKIITFKLDFK
KEFLIDFAINKYTRKNKSDSYDYIKLAVNDGFDRLLIPSVSNAVYKEKLDEAHQQSAQIFSDNLQQLLLQKPLKDHIVLG
FDPGYAHGCKLAVVDKNNQLLHTDIIYPHKPQELIEQAKNTLISLINKYQINTIAIGNGTASNESVIFISDLIKEFKLNI
NYCVISEDGASIYSASLIASEEFPNLSVEKRSAISIARRIIDPLGELIKIDPKSIGVGQYQHDINKNILEQKVDFCIDYC
VNQVGVDVNTASIPLLSKVSGLNKRSAKKIFEYVKEHQSIKSREQLKTIPYVTDKVFEQAAGFLRINNSLNFLDKTSIHP
ESYAIVNQLCEYIKLPINDLINNHQVLNQLNPNDLTNVLKTDVYTIENIINNLKNPLQDVRDDYDIPILRSQMVDINDLK
VGMLVQGTIRNQTQFGSFVDIGLKNDALLHISHYSEQDNLHVNKNINAYIDKIDTIAQKISLKLRP

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=748, Percent_Identity=32.7540106951872, Blast_Score=384, Evalue=1e-106,
Organism=Homo sapiens, GI27597090, Length=347, Percent_Identity=25.3602305475504, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI87082262, Length=697, Percent_Identity=35.2941176470588, Blast_Score=441, Evalue=1e-125,
Organism=Caenorhabditis elegans, GI17511129, Length=735, Percent_Identity=26.2585034013605, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI62484314, Length=748, Percent_Identity=29.9465240641711, Blast_Score=345, Evalue=9e-95,
Organism=Drosophila melanogaster, GI24640080, Length=502, Percent_Identity=21.7131474103586, Blast_Score=76, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 80380; Mature: 80380

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLIIKTLVQKLKIEAKYITNVLDLLADNNTIAFIARYRKHLTNNMDEFQIQAIAHEYE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLTKLNKRKEAIIKNLEQKGLLTDDLLESINNCQRLVDLENLYEPYASNKKTKASMAIEK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GLEPLALLILKNNPNCNIKEVAKQYLNEQVLSVDEAIAGACDIIAQKVANDATLRQMLYE
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TISKHAKLITKINKIANDPTENFALYYEFSCPIKYLKAYQLMAIDRANELKIITFKLDFK
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHEECCCCCEEEEEEEECCC
KEFLIDFAINKYTRKNKSDSYDYIKLAVNDGFDRLLIPSVSNAVYKEKLDEAHQQSAQIF
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
SDNLQQLLLQKPLKDHIVLGFDPGYAHGCKLAVVDKNNQLLHTDIIYPHKPQELIEQAKN
HHHHHHHHHHCCCHHCEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHH
TLISLINKYQINTIAIGNGTASNESVIFISDLIKEFKLNINYCVISEDGASIYSASLIAS
HHHHHHHHHCEEEEEECCCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCC
EEFPNLSVEKRSAISIARRIIDPLGELIKIDPKSIGVGQYQHDINKNILEQKVDFCIDYC
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VNQVGVDVNTASIPLLSKVSGLNKRSAKKIFEYVKEHQSIKSREQLKTIPYVTDKVFEQA
HHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
AGFLRINNSLNFLDKTSIHPESYAIVNQLCEYIKLPINDLINNHQVLNQLNPNDLTNVLK
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCHHHHHHCCCHHHHHHHHH
TDVYTIENIINNLKNPLQDVRDDYDIPILRSQMVDINDLKVGMLVQGTIRNQTQFGSFVD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEE
IGLKNDALLHISHYSEQDNLHVNKNINAYIDKIDTIAQKISLKLRP
ECCCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIDLIIKTLVQKLKIEAKYITNVLDLLADNNTIAFIARYRKHLTNNMDEFQIQAIAHEYE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLTKLNKRKEAIIKNLEQKGLLTDDLLESINNCQRLVDLENLYEPYASNKKTKASMAIEK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GLEPLALLILKNNPNCNIKEVAKQYLNEQVLSVDEAIAGACDIIAQKVANDATLRQMLYE
CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TISKHAKLITKINKIANDPTENFALYYEFSCPIKYLKAYQLMAIDRANELKIITFKLDFK
HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHEECCCCCEEEEEEEECCC
KEFLIDFAINKYTRKNKSDSYDYIKLAVNDGFDRLLIPSVSNAVYKEKLDEAHQQSAQIF
HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH
SDNLQQLLLQKPLKDHIVLGFDPGYAHGCKLAVVDKNNQLLHTDIIYPHKPQELIEQAKN
HHHHHHHHHHCCCHHCEEEECCCCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHH
TLISLINKYQINTIAIGNGTASNESVIFISDLIKEFKLNINYCVISEDGASIYSASLIAS
HHHHHHHHHCEEEEEECCCCCCCCCEEEHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCC
EEFPNLSVEKRSAISIARRIIDPLGELIKIDPKSIGVGQYQHDINKNILEQKVDFCIDYC
CCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VNQVGVDVNTASIPLLSKVSGLNKRSAKKIFEYVKEHQSIKSREQLKTIPYVTDKVFEQA
HHHHCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC
AGFLRINNSLNFLDKTSIHPESYAIVNQLCEYIKLPINDLINNHQVLNQLNPNDLTNVLK
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHCHHHHHHCCCHHHHHHHHH
TDVYTIENIINNLKNPLQDVRDDYDIPILRSQMVDINDLKVGMLVQGTIRNQTQFGSFVD
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEE
IGLKNDALLHISHYSEQDNLHVNKNINAYIDKIDTIAQKISLKLRP
ECCCCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]