| Definition | Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome. |
|---|---|
| Accession | NC_011374 |
| Length | 874,478 |
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The map label for this gene is gltX [H]
Identifier: 209554403
GI number: 209554403
Start: 869539
End: 870987
Strand: Reverse
Name: gltX [H]
Synonym: UUR10_0704
Alternate gene names: 209554403
Gene position: 870987-869539 (Counterclockwise)
Preceding gene: 209554027
Following gene: 209554507
Centisome position: 99.6
GC content: 26.64
Gene sequence:
>1449_bases ATGAAAATTAGAACACGTTATGCTCCATCACCAACTGGTTATTTACATATTGGTGGAGCGCGAACCGCTTTGTTTAATTA TTTATTAGCTAAAGCTTATGATGGTGATTTCATTATTCGCATTGAAGATACTGATGTTGAAAGAAATGTGGAAGGTGGAA TTGATTCTCAATTTAATTTTTTAGAATGAATGGGAATTGTTGCTGATGAATCAATTCGTAATCCTAAAACATTTGGACCA TATATTCAATCACAAAAACTAAAGCATTATGAAGCATTAGCTTTAGATTTAGTTGCACAAAAAAAAGCTTATTTTTGCTT TTGTAGTAAAGAACGATTAGATGCTGATCGTGAATTAGCTGAAAAATTACATGAAACACCTAAATATAAACGTCATTGTT TAAATTTAAATGAACAAACAATTCAAGCCAATTTATTAGCAAATAAAGAATATACAATTCGTTTAAAAATTGATGAAAAC AACGAGTATAGTTGAGATGATTTAATTCGGGGTAAAATCAGTATTCCAGGCAGTGCTTTAACCGATCCTGTTATTTTAAA GTCAAATAAAATTGCAATGTATAATTTCGCTGTTGTAATCGATGATTATGAAATGCAAATTTCGCATGTTATTCGTGGCG AAGAACATATTTCTAATACGCCTTATCAATTAGCAATTGCGCAAGCGCTAAATTATGATTTATCTAAAATTAAATATGGT CATTTATCAATTATTGTTGATGAAACAGGTAAAAAATTATCAAAGCGTAATTTAGCTTTAAAACAATTCGTATCTGATTA TGAAAAAGATGGCTATTGACCACATGCTATTACTAATTTTGTAGCATTATTAGGTTGAAGTCCAAAAAATAATCAAGAGA TTATGAGTTTAGTAGAAATGGTTGAGAATTTTGATGTTAATAATTTATCAAAATCACCTGCTTTTTTTGATATTAATAAA ATGAATTGATTTTCAACACAATACTTTAATAATATTTCACAAGATGAATTTATTGATTTTGTTAAGACTCATCCACTAAC AAAAGAATTAGTTTTAAAAGATACTACTTTCATTGATAAAGCACTATTATTTAAATCACACATTGTTAATTTAAAACAAT TAATTAATTTAGTTGATGAACAATTTAATTCTAATAAACAATTATTAGAAGAAGATGTAAATCATATTAAAAATAATCAA CTAACAAATGTTGTACAAGTTTTTTATGAACAATTAATAGTTAGTGAAAAATTTGATGAACAATCAATCAAAGAAGTAAT TAAGCAAGTTCAAAAAACAACAAACAATAAAGGTGCTAATTTATACATGCCAATTCGAATTGCTACAACGTTTAGTTCGC ATGGTCCTGAATTAGCGAAAACTATTTATTATTTAGGACGTGAAAATGTATTAAAAAATTTACAAAGTATTTTAAAAGTT TTAGGTTAG
Upstream 100 bases:
>100_bases TATAACGAATTATTGAGAGAGGGTTTTTATACAATTTTAAGCGGAGCAGGTAGCTCATTTATTTGCATAAAATTAAAAGA TAAGGAAAATCAAGTTATTC
Downstream 100 bases:
>100_bases TTGCGTTATGGTAAAAAATTTTTTTATAAAAGATCCTATTCATGGTTTAATCTCTTTTGATGAGCAATATGAATGAGCTT ATGAGCTAATTAAGACAAAA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MKIRTRYAPSPTGYLHIGGARTALFNYLLAKAYDGDFIIRIEDTDVERNVEGGIDSQFNFLEWMGIVADESIRNPKTFGP YIQSQKLKHYEALALDLVAQKKAYFCFCSKERLDADRELAEKLHETPKYKRHCLNLNEQTIQANLLANKEYTIRLKIDEN NEYSWDDLIRGKISIPGSALTDPVILKSNKIAMYNFAVVIDDYEMQISHVIRGEEHISNTPYQLAIAQALNYDLSKIKYG HLSIIVDETGKKLSKRNLALKQFVSDYEKDGYWPHAITNFVALLGWSPKNNQEIMSLVEMVENFDVNNLSKSPAFFDINK MNWFSTQYFNNISQDEFIDFVKTHPLTKELVLKDTTFIDKALLFKSHIVNLKQLINLVDEQFNSNKQLLEEDVNHIKNNQ LTNVVQVFYEQLIVSEKFDEQSIKEVIKQVQKTTNNKGANLYMPIRIATTFSSHGPELAKTIYYLGRENVLKNLQSILKV LG
Sequences:
>Translated_482_residues MKIRTRYAPSPTGYLHIGGARTALFNYLLAKAYDGDFIIRIEDTDVERNVEGGIDSQFNFLE*MGIVADESIRNPKTFGP YIQSQKLKHYEALALDLVAQKKAYFCFCSKERLDADRELAEKLHETPKYKRHCLNLNEQTIQANLLANKEYTIRLKIDEN NEYS*DDLIRGKISIPGSALTDPVILKSNKIAMYNFAVVIDDYEMQISHVIRGEEHISNTPYQLAIAQALNYDLSKIKYG HLSIIVDETGKKLSKRNLALKQFVSDYEKDGY*PHAITNFVALLG*SPKNNQEIMSLVEMVENFDVNNLSKSPAFFDINK MN*FSTQYFNNISQDEFIDFVKTHPLTKELVLKDTTFIDKALLFKSHIVNLKQLINLVDEQFNSNKQLLEEDVNHIKNNQ LTNVVQVFYEQLIVSEKFDEQSIKEVIKQVQKTTNNKGANLYMPIRIATTFSSHGPELAKTIYYLGRENVLKNLQSILKV LG >Mature_482_residues MKIRTRYAPSPTGYLHIGGARTALFNYLLAKAYDGDFIIRIEDTDVERNVEGGIDSQFNFLE*MGIVADESIRNPKTFGP YIQSQKLKHYEALALDLVAQKKAYFCFCSKERLDADRELAEKLHETPKYKRHCLNLNEQTIQANLLANKEYTIRLKIDEN NEYS*DDLIRGKISIPGSALTDPVILKSNKIAMYNFAVVIDDYEMQISHVIRGEEHISNTPYQLAIAQALNYDLSKIKYG HLSIIVDETGKKLSKRNLALKQFVSDYEKDGY*PHAITNFVALLG*SPKNNQEIMSLVEMVENFDVNNLSKSPAFFDINK MN*FSTQYFNNISQDEFIDFVKTHPLTKELVLKDTTFIDKALLFKSHIVNLKQLINLVDEQFNSNKQLLEEDVNHIKNNQ LTNVVQVFYEQLIVSEKFDEQSIKEVIKQVQKTTNNKGANLYMPIRIATTFSSHGPELAKTIYYLGRENVLKNLQSILKV LG
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=496, Percent_Identity=29.8387096774194, Blast_Score=223, Evalue=4e-58, Organism=Escherichia coli, GI1788743, Length=494, Percent_Identity=31.1740890688259, Blast_Score=245, Evalue=5e-66, Organism=Escherichia coli, GI226510925, Length=255, Percent_Identity=30.5882352941176, Blast_Score=102, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71993394, Length=495, Percent_Identity=34.3434343434343, Blast_Score=221, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6324540, Length=340, Percent_Identity=36.1764705882353, Blast_Score=196, Evalue=6e-51, Organism=Saccharomyces cerevisiae, GI6324742, Length=315, Percent_Identity=25.3968253968254, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321192, Length=321, Percent_Identity=25.8566978193146, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI24665321, Length=498, Percent_Identity=30.7228915662651, Blast_Score=218, Evalue=7e-57,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 54572; Mature: 54572
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRTRYAPSPTGYLHIGGARTALFNYLLAKAYDGDFIIRIEDTDVERNVEGGIDSQFNF CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC LEMGIVADESIRNPKTFGPYIQSQKLKHYEALALDLVAQKKAYFCFCSKERLDADRELAE EEECEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCHHHHHH KLHETPKYKRHCLNLNEQTIQANLLANKEYTIRLKIDENNEYSDDLIRGKISIPGSALTD HHHHCHHHHHHHCCCCHHHEEEEEEECCEEEEEEEECCCCCCCCHHHEEEEECCCCCCCC PVILKSNKIAMYNFAVVIDDYEMQISHVIRGEEHISNTPYQLAIAQALNYDLSKIKYGHL CEEEECCEEEEEEEEEEEECHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHEEECEE SIIVDETGKKLSKRNLALKQFVSDYEKDGYPHAITNFVALLGSPKNNQEIMSLVEMVENF EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DVNNLSKSPAFFDINKMNFSTQYFNNISQDEFIDFVKTHPLTKELVLKDTTFIDKALLFK CCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SHIVNLKQLINLVDEQFNSNKQLLEEDVNHIKNNQLTNVVQVFYEQLIVSEKFDEQSIKE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH VIKQVQKTTNNKGANLYMPIRIATTFSSHGPELAKTIYYLGRENVLKNLQSILKVLG HHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKIRTRYAPSPTGYLHIGGARTALFNYLLAKAYDGDFIIRIEDTDVERNVEGGIDSQFNF CCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCC LEMGIVADESIRNPKTFGPYIQSQKLKHYEALALDLVAQKKAYFCFCSKERLDADRELAE EEECEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHCCCHHHHHH KLHETPKYKRHCLNLNEQTIQANLLANKEYTIRLKIDENNEYSDDLIRGKISIPGSALTD HHHHCHHHHHHHCCCCHHHEEEEEEECCEEEEEEEECCCCCCCCHHHEEEEECCCCCCCC PVILKSNKIAMYNFAVVIDDYEMQISHVIRGEEHISNTPYQLAIAQALNYDLSKIKYGHL CEEEECCEEEEEEEEEEEECHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHEEECEE SIIVDETGKKLSKRNLALKQFVSDYEKDGYPHAITNFVALLGSPKNNQEIMSLVEMVENF EEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCC DVNNLSKSPAFFDINKMNFSTQYFNNISQDEFIDFVKTHPLTKELVLKDTTFIDKALLFK CCCCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH SHIVNLKQLINLVDEQFNSNKQLLEEDVNHIKNNQLTNVVQVFYEQLIVSEKFDEQSIKE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHH VIKQVQKTTNNKGANLYMPIRIATTFSSHGPELAKTIYYLGRENVLKNLQSILKVLG HHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA