Click here to switch to the map view.

The map label for this gene is oxaA [H]

Identifier: 209554229

GI number: 209554229

Start: 872643

End: 873794

Strand: Reverse

Name: oxaA [H]

Synonym: UUR10_0707

Alternate gene names: 209554229

Gene position: 873794-872643 (Counterclockwise)

Preceding gene: 209554287

Following gene: 209554601

Centisome position: 99.92

GC content: 31.08

Gene sequence:

>1152_bases
ATGTCATCGGTTGATAAACAAAATCTAATGAATAGAATGCGAATTTCTGTTTCACATTTTGCTGGCGCATCAAATGCGAA
TTCAACAAAAAAAGAACGTAGGAAAAAGATTTTAAACATTTTATTAAAAGTTTTTAAAGTTATTGTTTATACGTTCTTCT
TGGGTATTGGTTTATATGGTTGCTTTCAAAATATGGCTAATCATTGAACAATTAACTCTACTGTTGTCGGTAATGGTTTT
GAATTAGGATTTCACGTAGATCCTATTCTTGGCGCTAATGACATTCGCTTTGATTTAATTTATTCAGGGACAGGACCTTG
ATATCCAATGTCAGACTTCTCGTTTGATTATGGACCTTTCTATGCTTTATTCGTATGGCCAATCGCACAAATTTTATTAC
ATTTTATGTATGCAACAAGAGATTGACCAGCTGGTTTAAATGCTATTTTAGGATTGATTATCATTTTATTAATTATTCGT
GTAATTACAATGTTAATTTCAGCACGTGCTACAATTCAAACGGAGCGAATCTCTGAAATTCAAGGTAAAATTGCTGAAAT
CAATGCTAAATATAAAGACGCAAAAGACATGCAATCACGCCAAAAGAAACAAATGGAAACAAAAGAGTTATATCAAAAAC
ATAATGTTAAACCTTTAGCGCCATTTGAAAGTATGATTATTACTTTACCGATCTTTTTAATTATTTATCGTGTTGTTACA
ATTTTAAGACCACTTAAATTCATTAGTATCTTCTACATTTGAGACTTATCAGCGACGCCTATTTCTGAGATTTTCTCAAA
CTTTACAACTTCAGGTTGACCTTATATTTTCTTCTTATTAATCATTATTCCAGTGCAAATCTTATCGCAAAAAATACCAC
AGTTATTAGCTAAGAAACGAAATCGTAGTGCAACAACTGTTGGTGCTAAAAACAAACAACAATTAAAACGTGTGCGAATG
ACACAAAACATTATTGCGATTGTTTTAGCTGTTGTAGTAGCGATTTCTGCTTCAGGGATTGGTTTATATTGATTCTTTAA
CGCAATCTTTACAATTTTACAATCATATATTATTCACGTTATTATTATGAAACGTCGTTCAAATAGTGCCACAAGAATTG
AATCAAAACTTGCCAAATTAGGAATTAGCTAA

Upstream 100 bases:

>100_bases
TTTGTTTTAAATTGTGATAATATTAAAAAAATTCTTCAAACAATTATTAGTAAGCATAAACAAAATAAAATTAATAAATA
ATTTTAAAAAGGAGGTATAA

Downstream 100 bases:

>100_bases
CTTGAATAAAACAGTCATTAAAAATAAACTCAAGCAAGAAAGTTTTGTTCCATCAAAAAAAATGGGGCAAAACTTCTTGT
TGTCTAATGAGATAAAAAAC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSSVDKQNLMNRMRISVSHFAGASNANSTKKERRKKILNILLKVFKVIVYTFFLGIGLYGCFQNMANHWTINSTVVGNGF
ELGFHVDPILGANDIRFDLIYSGTGPWYPMSDFSFDYGPFYALFVWPIAQILLHFMYATRDWPAGLNAILGLIIILLIIR
VITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKPLAPFESMIITLPIFLIIYRVVT
ILRPLKFISIFYIWDLSATPISEIFSNFTTSGWPYIFFLLIIIPVQILSQKIPQLLAKKRNRSATTVGAKNKQQLKRVRM
TQNIIAIVLAVVVAISASGIGLYWFFNAIFTILQSYIIHVIIMKRRSNSATRIESKLAKLGIS

Sequences:

>Translated_383_residues
MSSVDKQNLMNRMRISVSHFAGASNANSTKKERRKKILNILLKVFKVIVYTFFLGIGLYGCFQNMANH*TINSTVVGNGF
ELGFHVDPILGANDIRFDLIYSGTGP*YPMSDFSFDYGPFYALFVWPIAQILLHFMYATRD*PAGLNAILGLIIILLIIR
VITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKPLAPFESMIITLPIFLIIYRVVT
ILRPLKFISIFYI*DLSATPISEIFSNFTTSG*PYIFFLLIIIPVQILSQKIPQLLAKKRNRSATTVGAKNKQQLKRVRM
TQNIIAIVLAVVVAISASGIGLY*FFNAIFTILQSYIIHVIIMKRRSNSATRIESKLAKLGIS
>Mature_382_residues
SSVDKQNLMNRMRISVSHFAGASNANSTKKERRKKILNILLKVFKVIVYTFFLGIGLYGCFQNMANH*TINSTVVGNGFE
LGFHVDPILGANDIRFDLIYSGTGP*YPMSDFSFDYGPFYALFVWPIAQILLHFMYATRD*PAGLNAILGLIIILLIIRV
ITMLISARATIQTERISEIQGKIAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKPLAPFESMIITLPIFLIIYRVVTI
LRPLKFISIFYI*DLSATPISEIFSNFTTSG*PYIFFLLIIIPVQILSQKIPQLLAKKRNRSATTVGAKNKQQLKRVRMT
QNIIAIVLAVVVAISASGIGLY*FFNAIFTILQSYIIHVIIMKRRSNSATRIESKLAKLGIS

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 42463; Mature: 42332

Theoretical pI: Translated: 10.70; Mature: 10.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVDKQNLMNRMRISVSHFAGASNANSTKKERRKKILNILLKVFKVIVYTFFLGIGLYG
CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFQNMANHTINSTVVGNGFELGFHVDPILGANDIRFDLIYSGTGPYPMSDFSFDYGPFYA
HHHHHHHCCCCCCEECCCEEECEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH
LFVWPIAQILLHFMYATRDPAGLNAILGLIIILLIIRVITMLISARATIQTERISEIQGK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKPLAPFESMIITLPIFLIIYRVVTILR
HHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLKFISIFYIDLSATPISEIFSNFTTSGPYIFFLLIIIPVQILSQKIPQLLAKKRNRSAT
HHHHHHHHEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVGAKNKQQLKRVRMTQNIIAIVLAVVVAISASGIGLYFFNAIFTILQSYIIHVIIMKRR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SNSATRIESKLAKLGIS
CCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSVDKQNLMNRMRISVSHFAGASNANSTKKERRKKILNILLKVFKVIVYTFFLGIGLYG
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFQNMANHTINSTVVGNGFELGFHVDPILGANDIRFDLIYSGTGPYPMSDFSFDYGPFYA
HHHHHHHCCCCCCEECCCEEECEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHH
LFVWPIAQILLHFMYATRDPAGLNAILGLIIILLIIRVITMLISARATIQTERISEIQGK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEINAKYKDAKDMQSRQKKQMETKELYQKHNVKPLAPFESMIITLPIFLIIYRVVTILR
HHHHCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLKFISIFYIDLSATPISEIFSNFTTSGPYIFFLLIIIPVQILSQKIPQLLAKKRNRSAT
HHHHHHHHEEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TVGAKNKQQLKRVRMTQNIIAIVLAVVVAISASGIGLYFFNAIFTILQSYIIHVIIMKRR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SNSATRIESKLAKLGIS
CCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]