| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is dps [H]
Identifier: 209551909
GI number: 209551909
Start: 4508093
End: 4508611
Strand: Direct
Name: dps [H]
Synonym: Rleg2_4342
Alternate gene names: 209551909
Gene position: 4508093-4508611 (Clockwise)
Preceding gene: 209551906
Following gene: 209551911
Centisome position: 99.34
GC content: 61.46
Gene sequence:
>519_bases ATGTCCCCGACCTCAGCCGAAACCCGCAGGCTCTCGCCGCTCAAGACGCCTTCCACCCTGCCGACCAACGCCGTCACCGA TATTTCGGCGGCGCTGACCGCGCTGCTTGCCGATGTCTTCGCGCTTTATATGAAAACCAAGAACTTCCATTGGCACATGT CCGGCCCGCATTTCCGCGATTATCATCTGCTGCTCGATGAACAGGCGGAGCAGATCTTCGCGATGACCGACGACATTGCC GAGCGCGCCCGCAAGATCGGCGGCGTGACGCTGCGCTCCATTGGCCAGATCTCCCGCCAGCAGCGCATCGCCGACAATGA CGCGGATTTCGTCACGCCCGAGGACATGCTGTCGGAACTGCGCGAGGATAACGGTCAGCTCGTTTCGCTGCTGCGCGAGG TGCACGATCTCTGCGACGAGCACAATGATGTCGCGACCGCCAGCCTGATCGAGAACTGGATCGACGAGTCCGAGCGCCGC ACCTGGTTCCTGTTCGAAACGACCCGGCGGCAGAAATAA
Upstream 100 bases:
>100_bases CTTGCTAGTTCTCTTTCTGCACGCGCGCCGCGACCGTCCTTTGGGCCTCTCGAACAGGCGCGCGGCGCTCTCGAGATTTT GATCACCAAGGAGAGAATTG
Downstream 100 bases:
>100_bases TATCAGCAGTCGGGGCGTGGTGTCATCTGTGCGGCACGCCCGGCTCTCAGCCTTGGAGTGCCCGCGGCCGCAGCCATCTT GGGCTCCAGCCGAGGTTCAT
Product: ferritin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSPTSAETRRLSPLKTPSTLPTNAVTDISAALTALLADVFALYMKTKNFHWHMSGPHFRDYHLLLDEQAEQIFAMTDDIA ERARKIGGVTLRSIGQISRQQRIADNDADFVTPEDMLSELREDNGQLVSLLREVHDLCDEHNDVATASLIENWIDESERR TWFLFETTRRQK
Sequences:
>Translated_172_residues MSPTSAETRRLSPLKTPSTLPTNAVTDISAALTALLADVFALYMKTKNFHWHMSGPHFRDYHLLLDEQAEQIFAMTDDIA ERARKIGGVTLRSIGQISRQQRIADNDADFVTPEDMLSELREDNGQLVSLLREVHDLCDEHNDVATASLIENWIDESERR TWFLFETTRRQK >Mature_171_residues SPTSAETRRLSPLKTPSTLPTNAVTDISAALTALLADVFALYMKTKNFHWHMSGPHFRDYHLLLDEQAEQIFAMTDDIAE RARKIGGVTLRSIGQISRQQRIADNDADFVTPEDMLSELREDNGQLVSLLREVHDLCDEHNDVATASLIENWIDESERRT WFLFETTRRQK
Specific function: Protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. It efficiently inhibits hydroxyl radical production by the Fenton reaction. Does
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 19687; Mature: 19556
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTSAETRRLSPLKTPSTLPTNAVTDISAALTALLADVFALYMKTKNFHWHMSGPHFRD CCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCH YHLLLDEQAEQIFAMTDDIAERARKIGGVTLRSIGQISRQQRIADNDADFVTPEDMLSEL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH REDNGQLVSLLREVHDLCDEHNDVATASLIENWIDESERRTWFLFETTRRQK HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC >Mature Secondary Structure SPTSAETRRLSPLKTPSTLPTNAVTDISAALTALLADVFALYMKTKNFHWHMSGPHFRD CCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCH YHLLLDEQAEQIFAMTDDIAERARKIGGVTLRSIGQISRQQRIADNDADFVTPEDMLSEL HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH REDNGQLVSLLREVHDLCDEHNDVATASLIENWIDESERRTWFLFETTRRQK HHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]