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The map label for this gene is rbsC [H]

Identifier: 209551903

GI number: 209551903

Start: 4501388

End: 4502410

Strand: Direct

Name: rbsC [H]

Synonym: Rleg2_4336

Alternate gene names: 209551903

Gene position: 4501388-4502410 (Clockwise)

Preceding gene: 209551902

Following gene: 209551904

Centisome position: 99.19

GC content: 60.7

Gene sequence:

>1023_bases
GTGTCCGCCAGCATTGAAAAACAGACCGAGGCGAAAGAGGCGCGCTTCTGGGACAAGCTTATCCGGATCTCGATGAAGGA
GGCGGGCGTCGCCATTGCCCTGATCCTGATCCTGGCGTTTTTCTCGGCGACGGCGCCCTATTTCGCCACGCCCGAGAATT
TCCTGAAGATCTTCGTTCAGATCGCCATCAACACCGTGCTTGCCGCGGGCATGACTTTCGTCATCCTGGTCGGCGGCATT
GATCTCTCGGTGGGATCGCTCCTTGCCCTTTGCACGGTGATCGGCGCCACGATCATGATCAATCCGGCCTTTTCGCCCTG
GCAGGCGATTGTTCTCGCCTGTCTGGCCTCGATGGGCACCGGTGCTGCGCTTGGCGCCGTCAATGGCTGGATCTGCGAGA
AGTGGAAGCTTCCCTCCTTCATCGTCACCCTCGGCATGCTGAATGTCGCGAGCGGCCTGGCCCGCGTCGTCAGCGACAAT
TCGACCATTACCGGCCTGCCGCAGCCTTTCGTCGATTTCGGCAACCTGATCTTCTGGGGCATATTCCCGTCGATCTTCCT
GATTGCGATCGTCGTCGTCCTGATCGGCTGGTTCGTGCTGCGTTACACCGTCTTCGGCCGCTTCGTTTTCGCCATCGGCA
CCAATGAAGAGGCTGTCCGTCTCTCCGGGCACCAGCCGAAACGATACAAGATCGCCGTCTTCACCATCTCAGGGCTGACG
GCCGGCATCGCCGCCATGGTCTATCTGCTCCGCCTCAATGTCGGCAGCCCGGTCGCCGGCATCGGCTACGAGCTGAATGC
CATTGCCGCCGTCATCATCGGTGGCACCAGCCTTTCTGGCGGCAAGGGCTCGATCATCGGCACGCTTGTCGGCGCCTGCA
TTCTGCAGGTGCTGTCGACCGGATTGCAGCTGCTCGGCGCTGACGACAATATCAAGCCGATCGTCATCGGCGCCGTCATC
GTGCTTGCCGTCATTCTCGACAGCTATCGCGGCCGGCTGATGCGGATCCTCGAAACACGGTAA

Upstream 100 bases:

>100_bases
CGCATCATCGTCTTCTCCGACGGCAAGATCGCGGGTGAAATCGTTCGGGAACAATTTGACGAAAGCAGGATCCTTTCGCT
CGCCTACAAGGAGTACAGCC

Downstream 100 bases:

>100_bases
TTGGGTGGCGGCGGCAAGCCTTGATTGACCGTTGCGTTTGATACCCGGCCGACCTACATCTGTCCGGCATTCAGCGAGGG
ACGGAAATGGCCAAGATCAC

Product: Monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSASIEKQTEAKEARFWDKLIRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLAAGMTFVILVGGI
DLSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGTGAALGAVNGWICEKWKLPSFIVTLGMLNVASGLARVVSDN
STITGLPQPFVDFGNLIFWGIFPSIFLIAIVVVLIGWFVLRYTVFGRFVFAIGTNEEAVRLSGHQPKRYKIAVFTISGLT
AGIAAMVYLLRLNVGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLSTGLQLLGADDNIKPIVIGAVI
VLAVILDSYRGRLMRILETR

Sequences:

>Translated_340_residues
MSASIEKQTEAKEARFWDKLIRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLAAGMTFVILVGGI
DLSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGTGAALGAVNGWICEKWKLPSFIVTLGMLNVASGLARVVSDN
STITGLPQPFVDFGNLIFWGIFPSIFLIAIVVVLIGWFVLRYTVFGRFVFAIGTNEEAVRLSGHQPKRYKIAVFTISGLT
AGIAAMVYLLRLNVGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLSTGLQLLGADDNIKPIVIGAVI
VLAVILDSYRGRLMRILETR
>Mature_339_residues
SASIEKQTEAKEARFWDKLIRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQIAINTVLAAGMTFVILVGGID
LSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGTGAALGAVNGWICEKWKLPSFIVTLGMLNVASGLARVVSDNS
TITGLPQPFVDFGNLIFWGIFPSIFLIAIVVVLIGWFVLRYTVFGRFVFAIGTNEEAVRLSGHQPKRYKIAVFTISGLTA
GIAAMVYLLRLNVGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLSTGLQLLGADDNIKPIVIGAVIV
LAVILDSYRGRLMRILETR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=315, Percent_Identity=39.6825396825397, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1790524, Length=334, Percent_Identity=36.2275449101796, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI145693152, Length=334, Percent_Identity=31.437125748503, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1788896, Length=333, Percent_Identity=33.033033033033, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI87082395, Length=260, Percent_Identity=36.1538461538462, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1789992, Length=137, Percent_Identity=47.4452554744526, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI145693214, Length=287, Percent_Identity=31.0104529616725, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787793, Length=287, Percent_Identity=29.9651567944251, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787794, Length=284, Percent_Identity=29.9295774647887, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788471, Length=320, Percent_Identity=31.875, Blast_Score=92, Evalue=7e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35968; Mature: 35837

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASIEKQTEAKEARFWDKLIRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
IAINTVLAAGMTFVILVGGIDLSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGT
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCC
GAALGAVNGWICEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWG
CHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
IFPSIFLIAIVVVLIGWFVLRYTVFGRFVFAIGTNEEAVRLSGHQPKRYKIAVFTISGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCEEEEEEEEECCHH
AGIAAMVYLLRLNVGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLST
HHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
GLQLLGADDNIKPIVIGAVIVLAVILDSYRGRLMRILETR
HHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SASIEKQTEAKEARFWDKLIRISMKEAGVAIALILILAFFSATAPYFATPENFLKIFVQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
IAINTVLAAGMTFVILVGGIDLSVGSLLALCTVIGATIMINPAFSPWQAIVLACLASMGT
HHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCC
GAALGAVNGWICEKWKLPSFIVTLGMLNVASGLARVVSDNSTITGLPQPFVDFGNLIFWG
CHHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
IFPSIFLIAIVVVLIGWFVLRYTVFGRFVFAIGTNEEAVRLSGHQPKRYKIAVFTISGLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCCEEEEEEEEECCHH
AGIAAMVYLLRLNVGSPVAGIGYELNAIAAVIIGGTSLSGGKGSIIGTLVGACILQVLST
HHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
GLQLLGADDNIKPIVIGAVIVLAVILDSYRGRLMRILETR
HHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]