| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yjeS [H]
Identifier: 209551886
GI number: 209551886
Start: 4486059
End: 4487210
Strand: Reverse
Name: yjeS [H]
Synonym: Rleg2_4319
Alternate gene names: 209551886
Gene position: 4487210-4486059 (Counterclockwise)
Preceding gene: 209551887
Following gene: 209551885
Centisome position: 98.88
GC content: 64.06
Gene sequence:
>1152_bases ATGCCCGAAGCTGATGACAAAGAGCGCCGCCGCCGCGACAATTTGACCAACTTCGTACGGGCGGAATCTGCCGCCAAGGG CTTCGATCTCTGCCGCATCACGCGTCCGGATGCGATCCCTGAAGCGAAGGAGCGCCTCGGCCAGTTCATCGATGCTGGGC GCCACGGGACGATGGAGTGGATGGCGGAGACGCGTGAGCGGCGCGGCGATCCCCGCACCCTCTGGAGCGAGGTGCGGTCC GTCGTCGTCTTCGGCCTCAATTACGCGCCGGAAGAAGATCCCCGCGGCATTCTCGCCAAGCCGGACAAGGCGGCGATTTC AGTCTATGCCCGCAACCGCGATTACCACGACATCATCAAGGGCCGGCTGAAGGAAATCGCCACGCGGTTTGCGGCGCGGG CCGGCGCCGATGTCAAAGTCTTCGTCGATACCGCCCCTGTCATGGAAAAGCCGCTGGCGGCGGCAGCCGGCCTCGGCTGG CAGGGCAAACACACCAATCTCGTCAGCCGCACGCATGGCTCCTGGCTGTTTCTCGGCAGCATGTTCACCACCGCCGATCT TGCCGTCGACGCTGAAGAGGCCGATCATTGCGGCTCCTGCCGCGCCTGCCTCGACATCTGTCCGACGGCCGCCTTCCCGG CGCCCTACCAGATCGACGCGCGGCGCTGCATCTCCTATCTCACCATCGAGCATAAGGGACCAATCGACCCGGAACTACGG CCGCTGATCGGCAATCGCATCTATGGCTGCGATGACTGTCTTGCCGCCTGTCCCTGGAACAAGTTCGCAAGTGCTGCCTC CGAAATGAAGCTGAAGGCGAGGGACGATCTGCAGGAGCCGTCGATTACCTTTCTGCTGACGCTCGACGATCCCACCTTCC GCGCCTTCTTCAGCGGCTCGCCGGTGAAGCGGATCGGCCGCGACCGCTTCATCCGCAATGTGCTGATCGCTGCCGGCAAT TCCGGCGAGAAGGCTCTCATCGGCCAATGTCGTATGCTCGCCGACGATGCCTCGCCGGTGGTGCGGGGGATGGCGGTGTG GGCGCTTTCGCGGCTGATGGCGGCTGGCGAATTCTCCGCCTTTGCCGCACAAAGGGCTGGTGAGAGCGACGACGACGTAT TGAACGAATGGCGGTTGGCGGGAGTGGGCTGA
Upstream 100 bases:
>100_bases GAAATCGCGCCCCTCCTTCCGGCCGATGCTGACCGAGCGGGTGCGCGGCCTGACGCCGGTTTCCCATTATGCCGATCTGG ATTTCTGACGAGGGCTCGTC
Downstream 100 bases:
>100_bases TGCATGTGATGATTTTTGGCTGCGGTTTTTCCGGCACGGCGATCGCCAGGGCCTTCGCCAACGACGGCGTGCGCATTTCC GGAACCACGCGGTCGGCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MPEADDKERRRRDNLTNFVRAESAAKGFDLCRITRPDAIPEAKERLGQFIDAGRHGTMEWMAETRERRGDPRTLWSEVRS VVVFGLNYAPEEDPRGILAKPDKAAISVYARNRDYHDIIKGRLKEIATRFAARAGADVKVFVDTAPVMEKPLAAAAGLGW QGKHTNLVSRTHGSWLFLGSMFTTADLAVDAEEADHCGSCRACLDICPTAAFPAPYQIDARRCISYLTIEHKGPIDPELR PLIGNRIYGCDDCLAACPWNKFASAASEMKLKARDDLQEPSITFLLTLDDPTFRAFFSGSPVKRIGRDRFIRNVLIAAGN SGEKALIGQCRMLADDASPVVRGMAVWALSRLMAAGEFSAFAAQRAGESDDDVLNEWRLAGVG
Sequences:
>Translated_383_residues MPEADDKERRRRDNLTNFVRAESAAKGFDLCRITRPDAIPEAKERLGQFIDAGRHGTMEWMAETRERRGDPRTLWSEVRS VVVFGLNYAPEEDPRGILAKPDKAAISVYARNRDYHDIIKGRLKEIATRFAARAGADVKVFVDTAPVMEKPLAAAAGLGW QGKHTNLVSRTHGSWLFLGSMFTTADLAVDAEEADHCGSCRACLDICPTAAFPAPYQIDARRCISYLTIEHKGPIDPELR PLIGNRIYGCDDCLAACPWNKFASAASEMKLKARDDLQEPSITFLLTLDDPTFRAFFSGSPVKRIGRDRFIRNVLIAAGN SGEKALIGQCRMLADDASPVVRGMAVWALSRLMAAGEFSAFAAQRAGESDDDVLNEWRLAGVG >Mature_382_residues PEADDKERRRRDNLTNFVRAESAAKGFDLCRITRPDAIPEAKERLGQFIDAGRHGTMEWMAETRERRGDPRTLWSEVRSV VVFGLNYAPEEDPRGILAKPDKAAISVYARNRDYHDIIKGRLKEIATRFAARAGADVKVFVDTAPVMEKPLAAAAGLGWQ GKHTNLVSRTHGSWLFLGSMFTTADLAVDAEEADHCGSCRACLDICPTAAFPAPYQIDARRCISYLTIEHKGPIDPELRP LIGNRIYGCDDCLAACPWNKFASAASEMKLKARDDLQEPSITFLLTLDDPTFRAFFSGSPVKRIGRDRFIRNVLIAAGNS GEKALIGQCRMLADDASPVVRGMAVWALSRLMAAGEFSAFAAQRAGESDDDVLNEWRLAGVG
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=341, Percent_Identity=36.950146627566, Blast_Score=244, Evalue=9e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 42235; Mature: 42104
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEADDKERRRRDNLTNFVRAESAAKGFDLCRITRPDAIPEAKERLGQFIDAGRHGTMEW CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHH MAETRERRGDPRTLWSEVRSVVVFGLNYAPEEDPRGILAKPDKAAISVYARNRDYHDIIK HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH GRLKEIATRFAARAGADVKVFVDTAPVMEKPLAAAAGLGWQGKHTNLVSRTHGSWLFLGS HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEECH MFTTADLAVDAEEADHCGSCRACLDICPTAAFPAPYQIDARRCISYLTIEHKGPIDPELR HHHHHHHEECCHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCHH PLIGNRIYGCDDCLAACPWNKFASAASEMKLKARDDLQEPSITFLLTLDDPTFRAFFSGS HHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCC PVKRIGRDRFIRNVLIAAGNSGEKALIGQCRMLADDASPVVRGMAVWALSRLMAAGEFSA CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHH FAAQRAGESDDDVLNEWRLAGVG HHHHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure PEADDKERRRRDNLTNFVRAESAAKGFDLCRITRPDAIPEAKERLGQFIDAGRHGTMEW CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHH MAETRERRGDPRTLWSEVRSVVVFGLNYAPEEDPRGILAKPDKAAISVYARNRDYHDIIK HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHH GRLKEIATRFAARAGADVKVFVDTAPVMEKPLAAAAGLGWQGKHTNLVSRTHGSWLFLGS HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEECH MFTTADLAVDAEEADHCGSCRACLDICPTAAFPAPYQIDARRCISYLTIEHKGPIDPELR HHHHHHHEECCHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCHH PLIGNRIYGCDDCLAACPWNKFASAASEMKLKARDDLQEPSITFLLTLDDPTFRAFFSGS HHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEECCC PVKRIGRDRFIRNVLIAAGNSGEKALIGQCRMLADDASPVVRGMAVWALSRLMAAGEFSA CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHH FAAQRAGESDDDVLNEWRLAGVG HHHHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]