| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209551881
Identifier: 209551881
GI number: 209551881
Start: 4479878
End: 4481416
Strand: Reverse
Name: 209551881
Synonym: Rleg2_4314
Alternate gene names: NA
Gene position: 4481416-4479878 (Counterclockwise)
Preceding gene: 209551882
Following gene: 209551880
Centisome position: 98.75
GC content: 63.55
Gene sequence:
>1539_bases ATGTCGCATGCCCCGGCCCGCCGACTGATCGCCCGCGCAATGTTCTGCGCCACGCTTGCCGGTTTTCCCGCAGCTCTCGC CGCCGGCTTCGATCTGCCGGCGAAGCGCACCGACCTTTCCGAAGCCGATCTGAAACGCGTCGCCGACGTCACCCGGCCGA CCAGGGATTTTTCCAAGGCCGAACAATATGAGGCGATGCAGGCGGGCGGCGCGACCTCGATCGATCCGGTTACCGAAGAC AGTTTCTCGCATATTTCGGCCAACATTCCCTTCGAGGAAGAGCAGAATTTCAAGCTCGGCAATGCGCTTTTCCGCAAGCT CTGGGTTTCCTCGCCCTCCTCGACGCAGGCCTCCGATGGGCTCGGCCCTCTCTTCAACGCCCGCTCCTGCATGAGCTGTC ACGTCAATGACGGCCGCGGCAAACCGCCGGAAGGGGGTCCAAGCGCCGTCTCGATGTTCCTGCGGCTTTCCCGCGCGGCC GCAACCCCGGAGGAAGAAAAGGCGATCGCGGGCGCGGATATCCTCAATTTCCCCGATCCGGTCTATGGCCATCAGCTGCA GGATCTTGCCGTTCCCGGCCTTGCCGCCGAAGGCCGGATGACGATCCGCTATGACGAGGAGACGGTGACGCTTGGTGACG GCGAAACCGTGTCTCTACGCCGCCCGCATTATGCGGCGACCAACCTGGCCTATGGACCGCTCGATGCGGCAACGACGATC TCGGCGCGTGTCGCCCCCGCGATGATCGGGCTCGGGCTGATCGAGGCCATTCCCGCGGCCGATATCCTTGCCCATGCCGA CCCTGAGGATGCCGATGGCGACGGCATCTCCGGCAAGGCGGCGATCGTCCGTGATCACCGCAGCGGCGAGATCGCGCTCG GCCGCTTCGGCTGGAAGGCGCAGAACGCCACGGTGCGCGACCAGAATGCCGACGCCTTCGCCAACGATATCGGTATCTCG ACACCCGACCACCCGGACGCGCATGGCGACTGCACCAAGGCGGAGGAGAAATGCCTCGATATGCCGACCGGCGTGCAGAA ACGGCTGGGCGCGGAAGAAGCGCCAGGCCCCATTCTCGACCTCGTGACCTTCTATTCCGAAAATCTTGCCGTTCCGGCGC GCCGCAAGGCGAGCTTCCCCGAGACGCTGAAGGGCAAACGGATTTTCTACGAAACCGGCTGCATTTCCTGCCATGTGCCG AAATTCGTCACCCGCCGGGATTCACCCGACAAGGCGCAGTCCTTCCAGCTGATCTGGCCCTATTCCGACTTCCTTCTGCA CGATATGGGCGACGGGCTTGCCGACGGGCAGCAGGTCGGTCTTGCAAGCGGACGTGAATGGCGCACGCCACCGCTATGGG GTATAGGACTGACCCGGACTGTCAGCGGACACAGCTTTTTCCTGCATGACGGCCGTGCGCGGGATCTCACCGAGGCGATC CTCTGGCACGGCGGCGAAGCAGACAAGGCCCGCAACGCTTTCTCCTCCCTGTCGAAAGACGACAGGAAGGCCCTGATTAC ATTCCTGGAGTCACTTTGA
Upstream 100 bases:
>100_bases GTTCAGCTTGAAGGTTCCGACAGCTTGGATAATCCTAACGCCGTCTTCAAATAAGCAAAAAGGCGGGCCGCTTCGATGAC GAGGCGGCCCGGACCCTGAA
Downstream 100 bases:
>100_bases TGCGCCTTTGGCACCCCCTGCTCTGCCTCACTCTGATCGGCCTCGCCACGTCGGCGGCCGCCCAGACCGCAGCCCCTCCG GCAGGGATGAACGAGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein; Thiol Oxidoreductase-Like; Thiol Oxidoreductase-Like Protein; Exported Protein; Signal Peptide
Number of amino acids: Translated: 512; Mature: 511
Protein sequence:
>512_residues MSHAPARRLIARAMFCATLAGFPAALAAGFDLPAKRTDLSEADLKRVADVTRPTRDFSKAEQYEAMQAGGATSIDPVTED SFSHISANIPFEEEQNFKLGNALFRKLWVSSPSSTQASDGLGPLFNARSCMSCHVNDGRGKPPEGGPSAVSMFLRLSRAA ATPEEEKAIAGADILNFPDPVYGHQLQDLAVPGLAAEGRMTIRYDEETVTLGDGETVSLRRPHYAATNLAYGPLDAATTI SARVAPAMIGLGLIEAIPAADILAHADPEDADGDGISGKAAIVRDHRSGEIALGRFGWKAQNATVRDQNADAFANDIGIS TPDHPDAHGDCTKAEEKCLDMPTGVQKRLGAEEAPGPILDLVTFYSENLAVPARRKASFPETLKGKRIFYETGCISCHVP KFVTRRDSPDKAQSFQLIWPYSDFLLHDMGDGLADGQQVGLASGREWRTPPLWGIGLTRTVSGHSFFLHDGRARDLTEAI LWHGGEADKARNAFSSLSKDDRKALITFLESL
Sequences:
>Translated_512_residues MSHAPARRLIARAMFCATLAGFPAALAAGFDLPAKRTDLSEADLKRVADVTRPTRDFSKAEQYEAMQAGGATSIDPVTED SFSHISANIPFEEEQNFKLGNALFRKLWVSSPSSTQASDGLGPLFNARSCMSCHVNDGRGKPPEGGPSAVSMFLRLSRAA ATPEEEKAIAGADILNFPDPVYGHQLQDLAVPGLAAEGRMTIRYDEETVTLGDGETVSLRRPHYAATNLAYGPLDAATTI SARVAPAMIGLGLIEAIPAADILAHADPEDADGDGISGKAAIVRDHRSGEIALGRFGWKAQNATVRDQNADAFANDIGIS TPDHPDAHGDCTKAEEKCLDMPTGVQKRLGAEEAPGPILDLVTFYSENLAVPARRKASFPETLKGKRIFYETGCISCHVP KFVTRRDSPDKAQSFQLIWPYSDFLLHDMGDGLADGQQVGLASGREWRTPPLWGIGLTRTVSGHSFFLHDGRARDLTEAI LWHGGEADKARNAFSSLSKDDRKALITFLESL >Mature_511_residues SHAPARRLIARAMFCATLAGFPAALAAGFDLPAKRTDLSEADLKRVADVTRPTRDFSKAEQYEAMQAGGATSIDPVTEDS FSHISANIPFEEEQNFKLGNALFRKLWVSSPSSTQASDGLGPLFNARSCMSCHVNDGRGKPPEGGPSAVSMFLRLSRAAA TPEEEKAIAGADILNFPDPVYGHQLQDLAVPGLAAEGRMTIRYDEETVTLGDGETVSLRRPHYAATNLAYGPLDAATTIS ARVAPAMIGLGLIEAIPAADILAHADPEDADGDGISGKAAIVRDHRSGEIALGRFGWKAQNATVRDQNADAFANDIGIST PDHPDAHGDCTKAEEKCLDMPTGVQKRLGAEEAPGPILDLVTFYSENLAVPARRKASFPETLKGKRIFYETGCISCHVPK FVTRRDSPDKAQSFQLIWPYSDFLLHDMGDGLADGQQVGLASGREWRTPPLWGIGLTRTVSGHSFFLHDGRARDLTEAIL WHGGEADKARNAFSSLSKDDRKALITFLESL
Specific function: Unknown
COG id: COG3488
COG function: function code C; Predicted thiol oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55097; Mature: 54966
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAPARRLIARAMFCATLAGFPAALAAGFDLPAKRTDLSEADLKRVADVTRPTRDFSKA CCCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH EQYEAMQAGGATSIDPVTEDSFSHISANIPFEEEQNFKLGNALFRKLWVSSPSSTQASDG HHHHHHHCCCCCCCCCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC LGPLFNARSCMSCHVNDGRGKPPEGGPSAVSMFLRLSRAAATPEEEKAIAGADILNFPDP CCCHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCCCC VYGHQLQDLAVPGLAAEGRMTIRYDEETVTLGDGETVSLRRPHYAATNLAYGPLDAATTI CCCCCHHHHCCCCCCCCCEEEEEECCCEEEECCCCEEEEECCCCHHCCCCCCCCCHHHHH SARVAPAMIGLGLIEAIPAADILAHADPEDADGDGISGKAAIVRDHRSGEIALGRFGWKA HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCC QNATVRDQNADAFANDIGISTPDHPDAHGDCTKAEEKCLDMPTGVQKRLGAEEAPGPILD CCCEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHH LVTFYSENLAVPARRKASFPETLKGKRIFYETGCISCHVPKFVTRRDSPDKAQSFQLIWP HHHHHHCCCCCCCHHCCCCCHHHCCCEEEEECCCEEECCCHHHHCCCCCCCCCCEEEECC YSDFLLHDMGDGLADGQQVGLASGREWRTPPLWGIGLTRTVSGHSFFLHDGRARDLTEAI HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHH LWHGGEADKARNAFSSLSKDDRKALITFLESL HHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHC >Mature Secondary Structure SHAPARRLIARAMFCATLAGFPAALAAGFDLPAKRTDLSEADLKRVADVTRPTRDFSKA CCCHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHH EQYEAMQAGGATSIDPVTEDSFSHISANIPFEEEQNFKLGNALFRKLWVSSPSSTQASDG HHHHHHHCCCCCCCCCCCCCCHHHEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC LGPLFNARSCMSCHVNDGRGKPPEGGPSAVSMFLRLSRAAATPEEEKAIAGADILNFPDP CCCHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHCCCCCC VYGHQLQDLAVPGLAAEGRMTIRYDEETVTLGDGETVSLRRPHYAATNLAYGPLDAATTI CCCCCHHHHCCCCCCCCCEEEEEECCCEEEECCCCEEEEECCCCHHCCCCCCCCCHHHHH SARVAPAMIGLGLIEAIPAADILAHADPEDADGDGISGKAAIVRDHRSGEIALGRFGWKA HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCC QNATVRDQNADAFANDIGISTPDHPDAHGDCTKAEEKCLDMPTGVQKRLGAEEAPGPILD CCCEECCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCHHHH LVTFYSENLAVPARRKASFPETLKGKRIFYETGCISCHVPKFVTRRDSPDKAQSFQLIWP HHHHHHCCCCCCCHHCCCCCHHHCCCEEEEECCCEEECCCHHHHCCCCCCCCCCEEEECC YSDFLLHDMGDGLADGQQVGLASGREWRTPPLWGIGLTRTVSGHSFFLHDGRARDLTEAI HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHH LWHGGEADKARNAFSSLSKDDRKALITFLESL HHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA