Click here to switch to the map view.

The map label for this gene is ybcL [H]

Identifier: 209551869

GI number: 209551869

Start: 4470072

End: 4470617

Strand: Direct

Name: ybcL [H]

Synonym: Rleg2_4302

Alternate gene names: 209551869

Gene position: 4470072-4470617 (Clockwise)

Preceding gene: 209551868

Following gene: 209551872

Centisome position: 98.5

GC content: 62.45

Gene sequence:

>546_bases
ATGCGTCTCATAACAGCAGTCCTTCTCGCCGCGTCCGTCTTTGGCGCCACATCTGCCCAGGCCGAAATGAAACTCACCTC
GAAAGATCTGACTTCAGGCAAGTCCATGGCCGATGCGCAGGTCTTCAACAGCTTCGGCTGCGCCGGCGGTAATATCTCGC
CGGAACTGGTCTGGTCGGGTGCACCCGAGGGAACCAAGAGCTTTGCGGTCATGGCTTACGATCCCGACGCTCCGACCGGC
TCGGGCTGGTGGCACTGGTCTGTCTTCAACATTCCCGCAAATACCTCGAAAATCGCCACCGGCGCCAGCGGCGAGAAAAA
GCTTCCGGCGGGTGCCGTGGAAGGGCATACCGATTTCGCTACGTCGGGATATGGCGGCGCGTGCCCGCCGGCCGGCGATG
CACCGCACCACTACCAGTTCACCGTCTACGCGCTCTCGGTCGACAAGCTGCCGCTGCCCGATACCGCGCCGGGGGCCATG
GTCGGTTTCTATGTCAGGGCAAATACGCTCGCCAAGGCCTCCATCGAGGTCACCTACGGCCGCTGA

Upstream 100 bases:

>100_bases
AGCACTTTGAACGGATCGGGGCAGAAGTTGAGCGTAGCGGGGCAGATGCACTGCCTCGCTGACGGTAGTTTTCCGGCGTC
ATCAACTGCAGGAAAACAGC

Downstream 100 bases:

>100_bases
AGCCGGCTGACCTCCGGCGACCGGTTCAGGCCGGCCGATAGATCTGCGCCACCGCGCCACCTGGAAAGGCTTTTGAGCTC
ATCAGCTTGAGAGGCTTTGG

Product: PEBP family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MRLITAVLLAASVFGATSAQAEMKLTSKDLTSGKSMADAQVFNSFGCAGGNISPELVWSGAPEGTKSFAVMAYDPDAPTG
SGWWHWSVFNIPANTSKIATGASGEKKLPAGAVEGHTDFATSGYGGACPPAGDAPHHYQFTVYALSVDKLPLPDTAPGAM
VGFYVRANTLAKASIEVTYGR

Sequences:

>Translated_181_residues
MRLITAVLLAASVFGATSAQAEMKLTSKDLTSGKSMADAQVFNSFGCAGGNISPELVWSGAPEGTKSFAVMAYDPDAPTG
SGWWHWSVFNIPANTSKIATGASGEKKLPAGAVEGHTDFATSGYGGACPPAGDAPHHYQFTVYALSVDKLPLPDTAPGAM
VGFYVRANTLAKASIEVTYGR
>Mature_181_residues
MRLITAVLLAASVFGATSAQAEMKLTSKDLTSGKSMADAQVFNSFGCAGGNISPELVWSGAPEGTKSFAVMAYDPDAPTG
SGWWHWSVFNIPANTSKIATGASGEKKLPAGAVEGHTDFATSGYGGACPPAGDAPHHYQFTVYALSVDKLPLPDTAPGAM
VGFYVRANTLAKASIEVTYGR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=179, Percent_Identity=51.3966480446927, Blast_Score=195, Evalue=2e-51,
Organism=Escherichia coli, GI1786990, Length=158, Percent_Identity=50, Blast_Score=158, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18708; Mature: 18708

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLITAVLLAASVFGATSAQAEMKLTSKDLTSGKSMADAQVFNSFGCAGGNISPELVWSG
CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECC
APEGTKSFAVMAYDPDAPTGSGWWHWSVFNIPANTSKIATGASGEKKLPAGAVEGHTDFA
CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCC
TSGYGGACPPAGDAPHHYQFTVYALSVDKLPLPDTAPGAMVGFYVRANTLAKASIEVTYG
CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCEEEEEEEEEEEC
R
C
>Mature Secondary Structure
MRLITAVLLAASVFGATSAQAEMKLTSKDLTSGKSMADAQVFNSFGCAGGNISPELVWSG
CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEECC
APEGTKSFAVMAYDPDAPTGSGWWHWSVFNIPANTSKIATGASGEKKLPAGAVEGHTDFA
CCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCC
TSGYGGACPPAGDAPHHYQFTVYALSVDKLPLPDTAPGAMVGFYVRANTLAKASIEVTYG
CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEECCEEEEEEEEEEEC
R
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]