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The map label for this gene is glxA [H]

Identifier: 209551867

GI number: 209551867

Start: 4468011

End: 4469021

Strand: Direct

Name: glxA [H]

Synonym: Rleg2_4300

Alternate gene names: 209551867

Gene position: 4468011-4469021 (Clockwise)

Preceding gene: 209551866

Following gene: 209551868

Centisome position: 98.46

GC content: 66.86

Gene sequence:

>1011_bases
ATGACCGACCCTGCGCAGCCCGTCGATATCCCGGTTTTCGTCGTCGTGCCGCCGCGCGTCCTTTTGCTCGACGTCGCCGG
CCCGATCGAGGTGCTGCGCAAGGCGAACCTCGAACAGAGCAGGGTGCGCTTTACCGTCACCTATATCGGTCCGTCGGCGA
CGGTCGGCAGCTCGATCGGTCTTGCCGTTACCGGCGTCGCTCCATTGCCGGAGCGATTGCCGGATGGCGCGCTCGTCGTC
ATTGCCGGCAGCGCCGACGCCCCGATGGAAAACGGCCTCGAGCATAGCGAACGGGAATGCGCCGATGAGGCTGCCATCGT
CGCATGGCTGAGACGCGCCATTCGTCCGGGAATTCGCCTGGCCTCGATCTGTTCGGGCGCTTTGCTCGCCGCCGAGGCGG
GAATGCTCGACGATTGCGACTGCACCACCCATCACGGCTGCATGGAAGATCTGATCCGGCTTGCGCCCACGGCGCGCGTC
CGGGAGAACCGGCTTTATGTCGAGGACGGCGAGCGCTTGACAAGCGCCGGCATCACCGCCGGCATCGACCTCATGCTGCA
TATCGTCGCCGAAGCGGCGGGCCACGCATGCGCTGTCGCGGTGGCGCGATATCTCGTCGTCTACCTCAGGCGCGGCGGCT
CCGACCCGCAGCTTTCACCTTGGCTCGAAGGCCGAAACCATATCCATCCGGTCATTCATCGTGCGCAGGACGCAGTGGTG
GCCGATCCGGCTCAGGACTGGTCGGTCGCCGCACTCGCCCGCCTCAGCGGCGCCAGCCCGCGCAACCTCTCGCGGCTGTT
CAACGAACAGACGGGCATGAGCGTCACGGATTTCGTCAATCGTATGCGCGTGGCGCTCGCCCGCGAGATGCTCGCCGGTT
CGCGGCTGGACATGGAGGCCGTCGCAATGCGCGCCGGCTTCGGCTCGGCGCGGCAGCTGCGTCGCGCCTGGAACCGCTTG
CATGAAAGCCCGCCGAGCACGGCACGATCAAGGCTGCAGATGGGGGCGTAG

Upstream 100 bases:

>100_bases
GGGAAATCCGGGACCGGACCGAACTTGTCCTCTCCGGTCGTTTCGCGCGGATCGCGACCGTTGAACAGGCACTGGCCGGC
CGTGGGGAGCTGCTCGCCGC

Downstream 100 bases:

>100_bases
GTATGTGCCGCTGAAGGCTGCTTCCAGCGAACCATCGCGAACCGATCAGGCTCTCTCCCCACCGGCGTCTCCCGGCTCAA
GGTTGCCCCTGCCACGGGGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTDPAQPVDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQSRVRFTVTYIGPSATVGSSIGLAVTGVAPLPERLPDGALVV
IAGSADAPMENGLEHSERECADEAAIVAWLRRAIRPGIRLASICSGALLAAEAGMLDDCDCTTHHGCMEDLIRLAPTARV
RENRLYVEDGERLTSAGITAGIDLMLHIVAEAAGHACAVAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVV
ADPAQDWSVAALARLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEAVAMRAGFGSARQLRRAWNRL
HESPPSTARSRLQMGA

Sequences:

>Translated_336_residues
MTDPAQPVDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQSRVRFTVTYIGPSATVGSSIGLAVTGVAPLPERLPDGALVV
IAGSADAPMENGLEHSERECADEAAIVAWLRRAIRPGIRLASICSGALLAAEAGMLDDCDCTTHHGCMEDLIRLAPTARV
RENRLYVEDGERLTSAGITAGIDLMLHIVAEAAGHACAVAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVV
ADPAQDWSVAALARLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEAVAMRAGFGSARQLRRAWNRL
HESPPSTARSRLQMGA
>Mature_335_residues
TDPAQPVDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQSRVRFTVTYIGPSATVGSSIGLAVTGVAPLPERLPDGALVVI
AGSADAPMENGLEHSERECADEAAIVAWLRRAIRPGIRLASICSGALLAAEAGMLDDCDCTTHHGCMEDLIRLAPTARVR
ENRLYVEDGERLTSAGITAGIDLMLHIVAEAAGHACAVAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVVA
DPAQDWSVAALARLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEAVAMRAGFGSARQLRRAWNRLH
ESPPSTARSRLQMGA

Specific function: Unknown

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36075; Mature: 35944

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPAQPVDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQSRVRFTVTYIGPSATVGSSIG
CCCCCCCCCEEEEEEECCEEEEEECCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCC
LAVTGVAPLPERLPDGALVVIAGSADAPMENGLEHSERECADEAAIVAWLRRAIRPGIRL
EEEECCCCCHHHCCCCEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
ASICSGALLAAEAGMLDDCDCTTHHGCMEDLIRLAPTARVRENRLYVEDGERLTSAGITA
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHCHHH
GIDLMLHIVAEAAGHACAVAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCEE
ADPAQDWSVAALARLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEA
ECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
VAMRAGFGSARQLRRAWNRLHESPPSTARSRLQMGA
HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
TDPAQPVDIPVFVVVPPRVLLLDVAGPIEVLRKANLEQSRVRFTVTYIGPSATVGSSIG
CCCCCCCCEEEEEEECCEEEEEECCCHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCC
LAVTGVAPLPERLPDGALVVIAGSADAPMENGLEHSERECADEAAIVAWLRRAIRPGIRL
EEEECCCCCHHHCCCCEEEEEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH
ASICSGALLAAEAGMLDDCDCTTHHGCMEDLIRLAPTARVRENRLYVEDGERLTSAGITA
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCEEEEECCCHHHHHCHHH
GIDLMLHIVAEAAGHACAVAVARYLVVYLRRGGSDPQLSPWLEGRNHIHPVIHRAQDAVV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCEE
ADPAQDWSVAALARLSGASPRNLSRLFNEQTGMSVTDFVNRMRVALAREMLAGSRLDMEA
ECCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
VAMRAGFGSARQLRRAWNRLHESPPSTARSRLQMGA
HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]